Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1474 ATGGAGAAAAGGAGTGGTATGAGTAACTACCTAGAAACATCAAAACCCTACTTCGCCATGGTCTCCTTACAATTCGGTTACGCTGGCATGAACATCATCACCAAAGTGTCGCTCAACAGAGGCATGAGCCACTATGTCCTTGTCGTGTACCGGCACGCCTTTGCGACTTTATCGATCGCCCCGTTTGCCCTTATGTTCGAGAGGAGGGGCCAACCCAAGATAACGCTCAAGCTTTTCATTCAGATATTCGCCCTCGCTCTTCTCGGGCCGGTGATCGATCAGAACTTCTACTATGCCGGGTTGAAATACACATCTCCAACTTTCTCATGTGCCATGAGCAACATCTTGCCTGCCATGACGTTTGTCATGGCTGTCATCTTCCGGATGGAGAAACTAGACATAAGGAAGGTGAGGTGCCAAGCAAAGGTGGTGGGAACGGCCGTGACGGTGGCAGGAGCGATGCTTATGACGTTGTACAAAGGACCAATAGTGGAGATGGTGTGGTCAAAGCACGTTCATCCTAGAAAATCTTACGTGACAGACACCAGTGGAGCTACCGACAAAGACTGGCTTAAGGGCTCCATCTTCCTCATCATCGCCACTCTTGCCTGGGCTTCTCTCTTTGTTTTGCAAAACCAAGCGTTGAAGACATACAAGAATCACCAGTTCTCTTTGACCACGCTGGTGTGCTTCGTCGGCACTCTCCAGGCCATTGCTGTCACCTTTGTCACTGAGAAAAAGGCCTCTGTTTGGAGAATTGGGTGGGATATGAACCTTCTAGCTGCTGCTTATGCTGGAATAGTGACATCAAGTCTGTCATACTACGTGCAAGGGCTGGTGATGAGGAAGAAGGGCCCAGTGTTCGCAACTGCTTTCAGCCCTCTGATGATGATCGTCGTAGCCATCATGGGATCTTTCATTCTCGCTGAAAAGATCTATCTTGGAGGTATACTCGGAGGAGTGCTGATAGTGATAGGTCTATACTCAGTGCTATGGGGAAAACACAAAGAAAACTCCGAGAACAACGACGGCGATGAGATTCCGGAGGCGATTAAGGGCCCAATAACCACTCCGACAGCTCAAGATATCGAAGCTAATGATAATAAGAATTATAACAAATCTAGATCTATACTAGGGCTAGAGTCGGCGGTCAGAGAGAGGCGACATCAGATTAAGGGCAGTGGCGAAGTGCTTTCGCCGTTGGTGTTCTTTCCGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGGGATCACGACCCTTTGTCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTCAATTTAGTATAAAAATTAGTAATCCTCCGACCGTCTATGTCAATCCTACTGCCGACATGATCATCAAGCGCCCTCACCCCTACGTTGACCCTTCAGGTTTGATCTCCGTCCCTTATTTACAGAATTGGATCTATCCGAGTTCTGATCTGGTTGATTTGGTTCGGAAGTTGAGCTCTATGTTTGGCCGTGATCCTCCGCTTTATTCTCAGCGCCCACCAAACCTTACCCCTAGCGTTAGCTCTAACTCTAGTTTAGGGCACTTTTCAAATGGAAATCCCCTAGTTTTGTTTGTATCCCCGCCCTTTGGTCCCTCCTAA 1659 48.95 MEKRSGMSNYLETSKPYFAMVSLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATLSIAPFALMFERRGQPKITLKLFIQIFALALLGPVIDQNFYYAGLKYTSPTFSCAMSNILPAMTFVMAVIFRMEKLDIRKVRCQAKVVGTAVTVAGAMLMTLYKGPIVEMVWSKHVHPRKSYVTDTSGATDKDWLKGSIFLIIATLAWASLFVLQNQALKTYKNHQFSLTTLVCFVGTLQAIAVTFVTEKKASVWRIGWDMNLLAAAYAGIVTSSLSYYVQGLVMRKKGPVFATAFSPLMMIVVAIMGSFILAEKIYLGGILGGVLIVIGLYSVLWGKHKENSENNDGDEIPEAIKGPITTPTAQDIEANDNKNYNKSRSILGLESAVRERRHQIKGSGEVLSPLVFFPQPTIRTEDGFLELAHPRGITTLCPRWRRADIEVPNLPVDVSSQFSIKISNPPTVYVNPTADMIIKRPHPYVDPSGLISVPYLQNWIYPSSDLVDLVRKLSSMFGRDPPLYSQRPPNLTPSVSSNSSLGHFSNGNPLVLFVSPPFGPS 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57038676 57041971 - Conep01aG0153400.1 Cone1ag1474 432165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1474 552 Pfam UEV domain 455 514 IPR008883 GO:0015031(InterPro)|GO:0036211(InterPro)
Cone1ag1474 552 ProSiteProfiles UEV domain profile. 368 518 IPR008883 GO:0015031(InterPro)|GO:0036211(InterPro)
Cone1ag1474 552 SUPERFAMILY UBC-like 455 517 IPR016135 -
Cone1ag1474 552 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Cone1ag1474 552 Gene3D Ubiquitin Conjugating Enzyme 445 518 IPR016135 -
Cone1ag1474 552 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020(InterPro)
Cone1ag1474 552 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020(InterPro)
Cone1ag1474 552 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone1ag1474 552 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0646 Cone-Chr19:5539031 Cone1ag1474 Cone-Chr1:57038676 9.77E-172 dispersed
Cone1ag1474 Cone-Chr1:57038676 Cone3ag0503 Cone-Chr3:2497111 8.03E-174 dispersed
Cone5ag0463 Cone-Chr5:1957745 Cone1ag1474 Cone-Chr1:57038676 8.30E-250 transposed
Cone1ag1474 Cone-Chr1:57038676 Cone5ag0462 Cone-Chr5:1954781 4.69E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1474 - - - 0.0