Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1537 ATGAGCCAGACAGAAGTATCAAGGATGAAGCCTCCTCTGGTTCCCCTTGCAACTTTACTTGGTCGTGAGCTTAGGAGCGAGAAGGTTGAGAAACCTTTTGTTAAGTTTGGTCAGGCTGCCTTGGCAAAGAAAGGAGAGGACTACTTTCTGATAAAACCTGATTGCCAGCGGATTCCTGGAAGCCCGTCAACATCTTTTTCTGTATTTGGGATTTTTGATGGGCATAATGGCATATCGGCTGCTATATTTGTAAAGGAGCGTCTATTGGACAATGTCTTGAATGCAATTCCCGAAGGTGCCAGCCGAGAAGAATGGCTTCAGGCCCTCCCTCGGGCTCTAGTTGCAGGTTTTGTGAAAACTGACATAGAGTTCCAGCAGAAAGGAGAGACTTCTGGGACTACTGTCACATTTGTTGTGATTGATGGGTGGACTGTCACTGTTGCGTCTGTTGGAGATTCTCGGTGCATTTTAGACACTCAGGGAGGCGTAGTTTCTCTATTGACCGTTGATCACAGGTTGGAGGAGAATATTGAAGAAAGGGAGCGTGTAACTGCAAGTGGGGGTGAGGTAGGAAGGCTGAATGTTTTTGGGGGTAATGAGGTTGGGCCCCTCCGCTGCTGGCCTGGTGGGCTATGTCTTTCTAGATCGATCGGCGACACAGATGTGGGAGAATTCATTGTCCCAATACCACATGTTAAACAAGTGAAGCTCTCAAATGCTGGTGGAAGACTAATTATAGCTTCTGATGGTATATGGGATGCATTATCTTCTGATATGGCTGCTCAATCTTGTCGAGGTTTACCTGCTGAGCTTGCTGCTAAGCTAGTTGTGAAGGAGGCTCTGCGGTCAAGGGGTCTGAAGGATGATACAACCTGCCTGGTTGTTGATATTATTCCATCAGATCATCTTGTATTACCATCAACTCCGAGAAAGAAACCAAATATGCTCACTTCCTTTATCTTCGGGAAAAAATCTCAGAACTCTTTGAATAAATCTGCAAATAAACTTTCAACTGTTGGAGTCGTGGAGGAATTATTTGAAGAAGGTTCTGCAATGCTTGCAGAAAGGCTGGGTAAGGATTTTCCTCTGGACAGAAACTCTGGGATTTTCAAGTGTGCTGTCTGCCAAGCGGATCAACCATCAAGGGAAGGTTTGTCTGTGAATTCCGGGCCTTTCTTCTCAATGGCATCAAAGCCATGGGAGGGCCCCTTCCTCTGTGCCAACTGTTGCAAAAAGAAGGACGCTATGGAAGGAAAAAGGCCAAGCAAACCCACAATAACTGCTTAA 1287 46.0 MSQTEVSRMKPPLVPLATLLGRELRSEKVEKPFVKFGQAALAKKGEDYFLIKPDCQRIPGSPSTSFSVFGIFDGHNGISAAIFVKERLLDNVLNAIPEGASREEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENIEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAQSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHLVLPSTPRKKPNMLTSFIFGKKSQNSLNKSANKLSTVGVVEELFEEGSAMLAERLGKDFPLDRNSGIFKCAVCQADQPSREGLSVNSGPFFSMASKPWEGPFLCANCCKKKDAMEGKRPSKPTITA 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57335055 57338088 - Conep01aG0159800.1 Cone1ag1537 432228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1537 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Cone1ag1537 428 Gene3D - 38 302 IPR036457 -
Cone1ag1537 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Cone1ag1537 428 SMART PP2C_4 23 295 IPR001932 -
Cone1ag1537 428 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Cone1ag1537 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Cone1ag1537 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Cone1ag1537 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone1ag1537 428 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0811 Cone-Chr13:7450088 Cone1ag1537 Cone-Chr1:57335055 3.13E-212 dispersed
Cone17ag0840 Cone-Chr17:6701476 Cone1ag1537 Cone-Chr1:57335055 2.55E-165 dispersed
Cone19ag0817 Cone-Chr19:6502440 Cone1ag1537 Cone-Chr1:57335055 2.55E-210 dispersed
Cone1ag1537 Cone-Chr1:57335055 Cone4ag1564 Cone-Chr4:12007728 1.14E-171 dispersed
Cone1ag1537 Cone-Chr1:57335055 Cone5ag0061 Cone-Chr5:306019 6.70E-299 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1537 - - - 0.0