Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1552 | ATGAGATCAAAGCTGATCAAGCTATGTGGACAAGCAGAAGGGCTCTTAGAGGCTCATTTCTCCACCCTCTTAGCCTCATACGAAAACCCACTTGACCATCTCCATCTCTTCCCTTACTATTCCAATTACCTAAAGCTCACCCAACTTGAGTTCAACGTTCTTACCAATCACATGAGCAGTTCATTCATTAACAAAATTGCCTTTGTGGGTTCACCACTTACTCTTACCTCAATTGTTTTGGCCTCAAATCACCTCAAGAGAATGTTCTTTCATACCACTGATGTAATGAATGTGACACATGCTTTGAAAGAGTATGATGATTTGTTTTTGGCAGCTTTAGTGGGTATGGATAAGGAGGACAAAGTTAAAGTTATTGAGCATTTGGCTAATAAGTTCTTGGCTCCAGGCGCTTATCTGATGTTGAGGAGTGCGCATGGAGCAAGGGCTTTTCTCTATCCAGTGGTTGATGCTTCTGATTTAAGAGGGTTTGAGATTCTTTCCGTGTTTCATCCTATGGATGATGTTATAAACTCTGTTGTTCTTGCACAAAAACTTCTGGTCGCTGTAAACTCGGTCCATTATCATCATCAGTTGTTAATGCCTTGTAAGCTGTGCGTTGAGATTGAGGCTTTCTATCCTCTTCATATGATTCATGGGAATATGATTGAGAAAATTGCTGCGGAGAAGCTGTGA | 693 | 40.98 | MRSKLIKLCGQAEGLLEAHFSTLLASYENPLDHLHLFPYYSNYLKLTQLEFNVLTNHMSSSFINKIAFVGSPLTLTSIVLASNHLKRMFFHTTDVMNVTHALKEYDDLFLAALVGMDKEDKVKVIEHLANKFLAPGAYLMLRSAHGARAFLYPVVDASDLRGFEILSVFHPMDDVINSVVLAQKLLVAVNSVHYHHQLLMPCKLCVEIEAFYPLHMIHGNMIEKIAAEKL | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57389062 | 57389830 | + | Conep01aG0161300.1 | Cone1ag1552 | 432243 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1552 | 230 | Gene3D | Vaccinia Virus protein VP39 | 83 | 185 | IPR029063 | - | |
Cone1ag1552 | 230 | Gene3D | Vaccinia Virus protein VP39 | 1 | 82 | IPR029063 | - | |
Cone1ag1552 | 230 | Pfam | Nicotianamine synthase protein | 86 | 187 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone1ag1552 | 230 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 189 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone1ag1552 | 230 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 86 | 205 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1552 | Cone-Chr1:57389062 | Cone5ag0076 | Cone-Chr5:365771 | 6.46E-131 | dispersed | |
Cone1ag1552 | Cone-Chr1:57389062 | Cone10ag0819 | Cone-Chr10:4161491 | 4.64E-82 | wgd | |
Cone1ag1552 | Cone-Chr1:57389062 | Cone3ag0845 | Cone-Chr3:4328238 | 5.50E-79 | wgd | |
Cone1ag1552 | Cone-Chr1:57389062 | Cone5ag0075 | Cone-Chr5:361880 | 2.66E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1552 | K05953 | - | rcu:8269821 | 282.337 |