Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1552 ATGAGATCAAAGCTGATCAAGCTATGTGGACAAGCAGAAGGGCTCTTAGAGGCTCATTTCTCCACCCTCTTAGCCTCATACGAAAACCCACTTGACCATCTCCATCTCTTCCCTTACTATTCCAATTACCTAAAGCTCACCCAACTTGAGTTCAACGTTCTTACCAATCACATGAGCAGTTCATTCATTAACAAAATTGCCTTTGTGGGTTCACCACTTACTCTTACCTCAATTGTTTTGGCCTCAAATCACCTCAAGAGAATGTTCTTTCATACCACTGATGTAATGAATGTGACACATGCTTTGAAAGAGTATGATGATTTGTTTTTGGCAGCTTTAGTGGGTATGGATAAGGAGGACAAAGTTAAAGTTATTGAGCATTTGGCTAATAAGTTCTTGGCTCCAGGCGCTTATCTGATGTTGAGGAGTGCGCATGGAGCAAGGGCTTTTCTCTATCCAGTGGTTGATGCTTCTGATTTAAGAGGGTTTGAGATTCTTTCCGTGTTTCATCCTATGGATGATGTTATAAACTCTGTTGTTCTTGCACAAAAACTTCTGGTCGCTGTAAACTCGGTCCATTATCATCATCAGTTGTTAATGCCTTGTAAGCTGTGCGTTGAGATTGAGGCTTTCTATCCTCTTCATATGATTCATGGGAATATGATTGAGAAAATTGCTGCGGAGAAGCTGTGA 693 40.98 MRSKLIKLCGQAEGLLEAHFSTLLASYENPLDHLHLFPYYSNYLKLTQLEFNVLTNHMSSSFINKIAFVGSPLTLTSIVLASNHLKRMFFHTTDVMNVTHALKEYDDLFLAALVGMDKEDKVKVIEHLANKFLAPGAYLMLRSAHGARAFLYPVVDASDLRGFEILSVFHPMDDVINSVVLAQKLLVAVNSVHYHHQLLMPCKLCVEIEAFYPLHMIHGNMIEKIAAEKL 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57389062 57389830 + Conep01aG0161300.1 Cone1ag1552 432243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1552 230 Gene3D Vaccinia Virus protein VP39 83 185 IPR029063 -
Cone1ag1552 230 Gene3D Vaccinia Virus protein VP39 1 82 IPR029063 -
Cone1ag1552 230 Pfam Nicotianamine synthase protein 86 187 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone1ag1552 230 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 189 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone1ag1552 230 PANTHER NICOTIANAMINE SYNTHASE 3 86 205 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1552 Cone-Chr1:57389062 Cone5ag0076 Cone-Chr5:365771 6.46E-131 dispersed
Cone1ag1552 Cone-Chr1:57389062 Cone10ag0819 Cone-Chr10:4161491 4.64E-82 wgd
Cone1ag1552 Cone-Chr1:57389062 Cone3ag0845 Cone-Chr3:4328238 5.50E-79 wgd
Cone1ag1552 Cone-Chr1:57389062 Cone5ag0075 Cone-Chr5:361880 2.66E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1552 K05953 - rcu:8269821 282.337