Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1566 | ATGGGAGCTTCTGTTATCTATATATTTCACGCGCGCTTAGCTATACGTGCTGGGCTTCAGTTTGAGAATTCTTGTGATGTCGGGGTCTTCTCGAAACTTACTAATGCTTACTGTTTGGTTGCGATTGGTGGCTCTGAAAGCTTTTACAGTGCATTTGAGACAGAATTAGCAGATGCTCCAAACTTTCCAATCGTAAAGACTTCTATTGGAGGAACTCGCATAATTGGTCGCCTTTGTGCTGGAAACAGAAATGGTCTTCTGATGCCTCACACCACTACTGATCAAGAACTTCAGCACTTGAGGAACAGTCTACCGGATAAAGTAGTTGTTCAACGTATAGATGAGAGACTCTCTGCTCTGGGGAATTGTATTGCATGCAATGACTACGTCGCTCTTGCGCACACTGATCTTGACAGGGAAACAGAGGAGATGATTGCAGATGTTCTTGGTGTAGAAGTTTTCAGGCAGACAATTGCAGGCAATATCCTCGTTGGAAGCTACTGTACCTTCTCCAACAGAGGTGGCTTGGTCCATCCTCATACATCCATAGATGATATGAATGAGCTTTCGACCCTTCTGCAAGTCCCCTTGGTGGCCGGAACTGTGAACCGTGGCAGTGAAGTAATAGCAGCCGGAATGACTGTGAATGACTGGACGGCATTTTGTGGGTCCGACACTACTGCAACTGAACTTTCAGTGATCGAGAATATCTTCAAGTTGAGGGAAGCACAACCAACTGCAATCGTGGATGAGATGAGAAAGTCATTGATTGATAGCTATGTGTGA | 786 | 45.17 | MGASVIYIFHARLAIRAGLQFENSCDVGVFSKLTNAYCLVAIGGSESFYSAFETELADAPNFPIVKTSIGGTRIIGRLCAGNRNGLLMPHTTTDQELQHLRNSLPDKVVVQRIDERLSALGNCIACNDYVALAHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCTFSNRGGLVHPHTSIDDMNELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIENIFKLREAQPTAIVDEMRKSLIDSYV | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57437971 | 57439774 | - | Conep01aG0162700.1 | Cone1ag1566 | 432257 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1566 | 261 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 19 | 260 | IPR002769 | GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER) | |
Cone1ag1566 | 261 | Gene3D | - | 15 | 241 | - | - | |
Cone1ag1566 | 261 | SUPERFAMILY | Pentein | 19 | 240 | - | - | |
Cone1ag1566 | 261 | CDD | IF6 | 14 | 239 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cone1ag1566 | 261 | Hamap | Translation initiation factor 6 [eif6]. | 4 | 261 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cone1ag1566 | 261 | Pfam | eIF-6 family | 19 | 219 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cone1ag1566 | 261 | PIRSF | Transl_init_IF-6 | 15 | 242 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cone1ag1566 | 261 | NCBIfam | translation initiation factor IF-6 | 20 | 240 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) | |
Cone1ag1566 | 261 | FunFam | Eukaryotic translation initiation factor 6 | 13 | 241 | - | - | |
Cone1ag1566 | 261 | SMART | eIF6neu2 | 17 | 220 | IPR002769 | GO:0042256(InterPro)|GO:0043022(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1566 | Cone-Chr1:57437971 | Cone5ag0090 | Cone-Chr5:426449 | 2.18E-171 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1566 | K03264 | - | vvi:100254404 | 446.432 |