Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1566 ATGGGAGCTTCTGTTATCTATATATTTCACGCGCGCTTAGCTATACGTGCTGGGCTTCAGTTTGAGAATTCTTGTGATGTCGGGGTCTTCTCGAAACTTACTAATGCTTACTGTTTGGTTGCGATTGGTGGCTCTGAAAGCTTTTACAGTGCATTTGAGACAGAATTAGCAGATGCTCCAAACTTTCCAATCGTAAAGACTTCTATTGGAGGAACTCGCATAATTGGTCGCCTTTGTGCTGGAAACAGAAATGGTCTTCTGATGCCTCACACCACTACTGATCAAGAACTTCAGCACTTGAGGAACAGTCTACCGGATAAAGTAGTTGTTCAACGTATAGATGAGAGACTCTCTGCTCTGGGGAATTGTATTGCATGCAATGACTACGTCGCTCTTGCGCACACTGATCTTGACAGGGAAACAGAGGAGATGATTGCAGATGTTCTTGGTGTAGAAGTTTTCAGGCAGACAATTGCAGGCAATATCCTCGTTGGAAGCTACTGTACCTTCTCCAACAGAGGTGGCTTGGTCCATCCTCATACATCCATAGATGATATGAATGAGCTTTCGACCCTTCTGCAAGTCCCCTTGGTGGCCGGAACTGTGAACCGTGGCAGTGAAGTAATAGCAGCCGGAATGACTGTGAATGACTGGACGGCATTTTGTGGGTCCGACACTACTGCAACTGAACTTTCAGTGATCGAGAATATCTTCAAGTTGAGGGAAGCACAACCAACTGCAATCGTGGATGAGATGAGAAAGTCATTGATTGATAGCTATGTGTGA 786 45.17 MGASVIYIFHARLAIRAGLQFENSCDVGVFSKLTNAYCLVAIGGSESFYSAFETELADAPNFPIVKTSIGGTRIIGRLCAGNRNGLLMPHTTTDQELQHLRNSLPDKVVVQRIDERLSALGNCIACNDYVALAHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCTFSNRGGLVHPHTSIDDMNELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIENIFKLREAQPTAIVDEMRKSLIDSYV 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57437971 57439774 - Conep01aG0162700.1 Cone1ag1566 432257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1566 261 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 19 260 IPR002769 GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER)
Cone1ag1566 261 Gene3D - 15 241 - -
Cone1ag1566 261 SUPERFAMILY Pentein 19 240 - -
Cone1ag1566 261 CDD IF6 14 239 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cone1ag1566 261 Hamap Translation initiation factor 6 [eif6]. 4 261 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cone1ag1566 261 Pfam eIF-6 family 19 219 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cone1ag1566 261 PIRSF Transl_init_IF-6 15 242 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cone1ag1566 261 NCBIfam translation initiation factor IF-6 20 240 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cone1ag1566 261 FunFam Eukaryotic translation initiation factor 6 13 241 - -
Cone1ag1566 261 SMART eIF6neu2 17 220 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1566 Cone-Chr1:57437971 Cone5ag0090 Cone-Chr5:426449 2.18E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1566 K03264 - vvi:100254404 446.432