Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1567 ATGGTGAGATCATGTGATTGTATGCCATTTTTGGCTATGGCTCTAGTGCAAGTGTTTTATTCATGGATGAATATCACGTCGAAGCTAGCCCTGGAATCTGGCATGAACCCACTGGTTTTTGTCACTTACCGCCAGATCTTCGCTTCACTAGCCGTCGTTCCCTTCGCTTACTTAGCCGAGAGGAAAAGACCCCCTATCACAAAGTTCATTCTGTTTCAGATTCTACTATGTTCCTTAACCGGGGCGACTGCAAATCAGGTCTTTTTCTACCTTGGGTTAAAATACTCAACCCCAACGATTGCATGTGCAATTACCAATATACTCCCCGCCGTCACTTTTGTCTTCGCTGTCCTTTCCAGACAGGAATCGGTGGGAATAAAGACAAAGGCCGGGGTGGGCAAGGTAATTGGGACAATAGTTTGCGTAGGTGGGGCCATGTTACTGTCATTCTACCATGGGCCTCCACTGAAATTGGGCCAGTCTAAGATCCATTGGACCTATGCCGAGAACATGATGAGAGACAGAAGGTCTATGAATGAAGGCCATCATATATTGGGCTCACTTCTATTAATGACAGGCTCTGTTGGTTGGGCCGCTTGGTTTGTCATCCAGGCGAGATTGAATGAGATATTTCCAGCTCCATATACAAGTATGACGCTCATGTTTTCTATGGCTACGATTGAATGCGGACTAATAGCCGTAGGCGTAAATCATCAGATTTCTGCTTGGTCTCTAAAAAGCCCTATCAGACTTGTCGGAGTTCTCTATGCGGGGATGGTGTGTTCTGGGATATGCTATTGCCTCACCTCATGGAGTATACAGAAAAAGGGCCCGCTCTACGTTTCGGTGTTCAACCCTTTATTGCTTGTCATTGTAGCAATTCTAAGCTGGGCTCTACTTCGAGAACAATTATATACGGGAACTGTGATGGGTTCCATTATGATAATAGCGGGTCTGTATACTGTTTTGTGGGGTAAGAATAAAGAGATGATGATGAAGAAGGTAGTTGATGATAATGGTGATGTTGAATTCCAGGGTTACGTGCCGCCTCGTGATATTATTCAAGGCACAAATGAGAGGGAGAAGAGTCATGTTAATAATGGAGGAGTCGACGATGTTCATGTTTAA 1128 44.77 MVRSCDCMPFLAMALVQVFYSWMNITSKLALESGMNPLVFVTYRQIFASLAVVPFAYLAERKRPPITKFILFQILLCSLTGATANQVFFYLGLKYSTPTIACAITNILPAVTFVFAVLSRQESVGIKTKAGVGKVIGTIVCVGGAMLLSFYHGPPLKLGQSKIHWTYAENMMRDRRSMNEGHHILGSLLLMTGSVGWAAWFVIQARLNEIFPAPYTSMTLMFSMATIECGLIAVGVNHQISAWSLKSPIRLVGVLYAGMVCSGICYCLTSWSIQKKGPLYVSVFNPLLLVIVAILSWALLREQLYTGTVMGSIMIIAGLYTVLWGKNKEMMMKKVVDDNGDVEFQGYVPPRDIIQGTNEREKSHVNNGGVDDVHV 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57440443 57442555 - Conep01aG0162800.1 Cone1ag1567 432258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1567 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 149 - -
Cone1ag1567 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Cone1ag1567 375 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
Cone1ag1567 375 Pfam EamA-like transporter family 11 142 IPR000620 GO:0016020(InterPro)
Cone1ag1567 375 PANTHER WAT1-RELATED PROTEIN 11 334 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1567 Cone-Chr1:57440443 Cone9ag1116 Cone-Chr9:7336197 2.61E-74 dispersed
Cone1ag1567 Cone-Chr1:57440443 Cone12ag0935 Cone-Chr12:8157915 3.15E-75 transposed
Cone1ag1567 Cone-Chr1:57440443 Cone8ag0969 Cone-Chr8:9136776 2.90E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1567 - - - 0.0