Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1586 ATGAGGAAGCTTTTGTGGGTCGGATTTGTAATGGAGCTAGTTTTTAGCAAATGGGTTGCTGGGTTTATGTTGGATAATGTAACAGAGGTGTCTTTATCCGATGCTTATGGAGTTTCTACAGCTGCTTACAATCCATTAATGGTGGGACTTACTCTCATTCACAGTGCCGCTGCTAAAGGAGCCGTGTGCTTGGACGGATCATTACCCGGGTATCATATCCATCGCGGATACGGGTCTGGAGCAAATAGCTGGCTCATTCATTTGGAGGGAGGTGGATGGTGTAATACTATTAGAAATTGTATATACCGCAAAAAAACACACAGGGGATCATCGTATTATATGGAAAAGCAGATACCATTTATAGGAATTTTGAGTAATAGTGCTGCTGAAAATCCTGATTTTTTCAACTGGAACAGAGTAAAGGTTCGATATTGTGACGGCGCTTCTTTTACTGGTGATAGCGAAGATAAGGTTGCACAATTGCAATTTAGAGGACAGCGAATATGGTGGGCTGCAATGGAAGACTTGATGTCAAAGGGAATGCGTTCAGCCAAGCAGGCTCTTCTGTCCGGCTGCTCCGCTGGGGGTCTGGCCGCAATTTTACACTGTGATGAGTTCCAAAACTTATTTCCCAGAACTACCAAAGTCAAATGCCTCAGTGATGCCGGCTTATTTCTCGACGCGGCTGACATATCTGGAGGGCGCTCTTTAAGGAACCTTTTTGGTGGTGTGGTCGGATTGCAGGGAGTGCGAAAGAATCTGCCAAGTTCTTGTACAAATCATCTCGACCCAACTTCGTGCTTCTTCCCTCAAAACTTGATTGCGAGCATTAGAACCCCATTGTTCCTTCTGAATGCAGCCTATGATTCATGGCAGATCCAATCTAGTTTAGCCCCGCCTTCTGTGGATCCTGCTGGATTTTGGCACGATTGCAGATTAAACCATGGAAAATGTTCGGGAGGACAGCTTCAATTTCTACAAGGGTTTAGAAATCAAATGTTAAATGCCGTAGGGGGCTTCTCCACATCCAGAGCTAACGGGTTATTTGTAAATTCATGTTTTGCCCACTGCCAAACTGAGAGGCAAGATACATGGTTTGCAGATGATTCGCCCACGCTTGGAAACAAGGCGATAGCCATTGCTGTTGGAGATTGGTACTATGACCGAGCAAGCATCAAGTTCATAGACTGTCCCTACCCTTGTGACAATACTTGTCACCATCTCGTCTTCAGAAGCTAA 1239 45.04 MRKLLWVGFVMELVFSKWVAGFMLDNVTEVSLSDAYGVSTAAYNPLMVGLTLIHSAAAKGAVCLDGSLPGYHIHRGYGSGANSWLIHLEGGGWCNTIRNCIYRKKTHRGSSYYMEKQIPFIGILSNSAAENPDFFNWNRVKVRYCDGASFTGDSEDKVAQLQFRGQRIWWAAMEDLMSKGMRSAKQALLSGCSAGGLAAILHCDEFQNLFPRTTKVKCLSDAGLFLDAADISGGRSLRNLFGGVVGLQGVRKNLPSSCTNHLDPTSCFFPQNLIASIRTPLFLLNAAYDSWQIQSSLAPPSVDPAGFWHDCRLNHGKCSGGQLQFLQGFRNQMLNAVGGFSTSRANGLFVNSCFAHCQTERQDTWFADDSPTLGNKAIAIAVGDWYYDRASIKFIDCPYPCDNTCHHLVFRS 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57518332 57522531 - Conep01aG0164700.1 Cone1ag1586 432277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1586 412 Pfam Pectinacetylesterase 44 390 IPR004963 GO:0016787(InterPro)
Cone1ag1586 412 PANTHER NOTUM-RELATED 33 407 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0423 Cone-Chr13:3895824 Cone1ag1586 Cone-Chr1:57518332 3.41E-79 dispersed
Cone1ag1586 Cone-Chr1:57518332 Cone3ag0338 Cone-Chr3:1713273 2.66E-151 dispersed
Cone1ag1161 Cone-Chr1:55733883 Cone1ag1586 Cone-Chr1:57518332 8.75E-155 transposed
Cone6ag0879 Cone-Chr6:4484632 Cone1ag1586 Cone-Chr1:57518332 1.30E-121 transposed
Cone1ag1586 Cone-Chr1:57518332 Cone10ag0844 Cone-Chr10:4294637 3.98E-211 wgd
Cone1ag1586 Cone-Chr1:57518332 Cone5ag0108 Cone-Chr5:497092 2.85E-301 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1586 K19882 - csv:101218273 686.411