Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1598 ATGGAAACTTCATCTACGAATTCAGATCCCTACACTAATTCTTCTTCGTCGTCCTCAAACACCACTAACTCCGCCACATTAGGAATCCGCTTCCCTTCCCTCAATTTCAATTTCTTTCACTCCCCATTATCCTTCTTATTGGATCACTCTGGTATTCTTCGTACTCACCAAGAAACTACTGCCGATTCTCTTACGGTCAACCAATTGCGGTCTCGCTCTCTGAATCGGAATCATTCTTCCTCTCGTTCTGCTGCTGCTTCCGTCTCCGAGTCCGGGGAGATCGCGATTAGGATAATTGGTGCGGGAGACCAAGACTCTGCTACTGCCTCCTCGCCGTCTAGGGCTCATCTGGTTGGAGAAGCTTGTTCCGATCAGGATGGTGGTGGAGTTGCTGTTTTGGACGATCAGACGGACTCTTCCAACGAGGAAAGAGTTCCCTTGGTGAATAATGACTCTTCTTTGACTGGTCGTTCTGGAGTCAGCCGTGACGGTGGGAACTCTTTTGGTGAGTTGGAAGATGACGGTGGTGTCAGAGACAGGGATTCAGCTTACCAGAGATATGATATTCAACAGGTTGCTAGGTGGATTGAGCAGATTCTTCCCTTTTCTTTGTTATTGCTAGCCGTTTTCATCCGGCAGCATTTGCAAGGTTTTTTCGTCACACTATGGATTTCAGCTGTCATGTATAAATCGAATGATATTGTGAGGAAACAGACAGCTCTAAAGGGGGAGAGGAGGATCTCCGTCCTTGCTGTCATTTCTGTTTCCTTTCTGATTCACGTTGTGGGAATTTACTGGTGGTTTGGTTCTGATGATCTTCTTTATCCATTTGCCATGCTTCCACCAAAAGTAATACCTCCTTTCTGGCATGCTGTATTCATCGTTTTGGTAAATGATACAATGGTGAGGCAGGCAGCAATGGCTTTCAAGTGTTTGCTACTTATGTATTACAGGAATGGGCGAGGCCACAGTTTCCGTAGACAGGGTCAATTGTTAACTCTGGTTGAGTACACTCTTCTATTATACCGTGCTTTGTTACCAACACCTGTGTGGTACCGGTTCTTCTTGAATAAAGAATATGGAAGCCTCTTTTCATCACTGACTACAGGGTTATATCTAACTTTCAAGCTAACATCTGTTGTTGAGAAGATCAAATCCTTCTTTGCTGCCTTAAAGGCCCTATCACGGAAAGAAGTCCACTATGGTTCTTCTGCAACATCAGAACAGGTAATTGCAGCAGGTGAACTCTGTGCCATTTGCCAGGAGAAGATGCACACTCCTATTCTGTTGCGCTGTAAACACATCTTCTGTGAAGACTGTGTATCGGAGTGGTTTGAAAGGGAAAGAACATGCCCTCTATGCCGGGCTCTGGTTAAACCTGCTGATCTTCGAACATTCGGAGATGGCTCGACAAATTTACTATTTCAACTGTTCTAA 1437 45.09 METSSTNSDPYTNSSSSSSNTTNSATLGIRFPSLNFNFFHSPLSFLLDHSGILRTHQETTADSLTVNQLRSRSLNRNHSSSRSAAASVSESGEIAIRIIGAGDQDSATASSPSRAHLVGEACSDQDGGGVAVLDDQTDSSNEERVPLVNNDSSLTGRSGVSRDGGNSFGELEDDGGVRDRDSAYQRYDIQQVARWIEQILPFSLLLLAVFIRQHLQGFFVTLWISAVMYKSNDIVRKQTALKGERRISVLAVISVSFLIHVVGIYWWFGSDDLLYPFAMLPPKVIPPFWHAVFIVLVNDTMVRQAAMAFKCLLLMYYRNGRGHSFRRQGQLLTLVEYTLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKIKSFFAALKALSRKEVHYGSSATSEQVIAAGELCAICQEKMHTPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRTFGDGSTNLLFQLF 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57571891 57575235 - Conep01aG0166100.1 Cone1ag1598 432289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1598 478 SMART ring_2 417 454 IPR001841 -
Cone1ag1598 478 MobiDBLite consensus disorder prediction 136 172 - -
Cone1ag1598 478 MobiDBLite consensus disorder prediction 142 162 - -
Cone1ag1598 478 CDD RING-HC_RNFT1-like 415 455 - -
Cone1ag1598 478 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 391 476 IPR013083 -
Cone1ag1598 478 SUPERFAMILY RING/U-box 410 460 - -
Cone1ag1598 478 ProSitePatterns Zinc finger RING-type signature. 432 441 IPR017907 -
Cone1ag1598 478 ProSiteProfiles Zinc finger RING-type profile. 417 455 IPR001841 -
Cone1ag1598 478 MobiDBLite consensus disorder prediction 1 23 - -
Cone1ag1598 478 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 7 478 IPR044235 GO:0061630(InterPro)|GO:0061630(PANTHER)|GO:1904294(InterPro)
Cone1ag1598 478 Pfam Ring finger domain 416 455 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1461 Cone-Chr19:9490476 Cone1ag1598 Cone-Chr1:57571891 2.03E-187 dispersed
Cone1ag1598 Cone-Chr1:57571891 Cone5ag0120 Cone-Chr5:543484 1.90E-301 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1598 - - - 0.0