Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1620 | ATGGACCACCGATCAGTTCTTCGTCAAACCCGAACCATGCATTCCGAGGTGCTCATCACCGGCGGGCACATTCCGAGGTATATTTCCGGCTGCCTAACGATCTCGATCTGGTATCGGACCCGTTCGATGGCCCATCTGGTACCTTGGGATCTGAGGACGACCTTTTCTCCACCTTCATGGACATTGAGAAGTTTGGATCCAAACTCGACGACGGGACCCTCTGAAACCGACATTGCTGCCGGTACTTCTCAGCCGGACCGCCCTAGGCACCGCCATAGCAATTCTGTTGATGGCTCTCCGCTTTTGGACTCTATAGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCCGAGTTATGGATCCTTGATCCCAAGCGAGCCAAAAGGATTTTGGCAAATAGACAGTCTGCTGCTCGTTCAAAAGAGAGGAAAGCCTGCTACATAACAGAGCTTGAGAGAAAAGTTCAAACCCTTCAAACTGAAGCCACCACACTTTCCGCGCAGCTAACTTTGTTCCAGAGAGATACAACAGGTTTGTGTTCCGAAAACACCGAGCTCAAGCTTCGTTTACAAGCCATGGAACAACAAGCCCAATTGCATGATGCTCTAAATGAAGCACTGAAAAAGGAAGTAGAGCAACTCAAGATTGCCACTGGAGAAATATTGACACCCACCGAAACTTTTAATTTCGGAATGCAACATATGCCCTACACCCAGTCATGGTATTCAAATCAGCCACAACACAGCCCACGCGATCCCCAGAACAATCAAAGGCCCGATCATCAAGTTCAAGCATTCCAGTCCAATTTTCCAGGCCCTCATCAGAGCCCACTTTCTGGCTCCCAGTCACACACCTTCTCGGAAATGTTACAGCATGATCCTATCGGGCAGTTGCAGCTGCAGGGACTTGATATTGGTGGAAGAGGCCCCCAAATAATAAAGCCTGAAGGTTCCTCCATTTCCATTAGTGAAAGCAGCAGTACGTTTTGA | 990 | 49.09 | MDHRSVLRQTRTMHSEVLITGGHIPRYISGCLTISIWYRTRSMAHLVPWDLRTTFSPPSWTLRSLDPNSTTGPSETDIAAGTSQPDRPRHRHSNSVDGSPLLDSIEAKKAMDPDKLAELWILDPKRAKRILANRQSAARSKERKACYITELERKVQTLQTEATTLSAQLTLFQRDTTGLCSENTELKLRLQAMEQQAQLHDALNEALKKEVEQLKIATGEILTPTETFNFGMQHMPYTQSWYSNQPQHSPRDPQNNQRPDHQVQAFQSNFPGPHQSPLSGSQSHTFSEMLQHDPIGQLQLQGLDIGGRGPQIIKPEGSSISISESSSTF | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57637603 | 57639909 | + | Conep01aG0168300.1 | Cone1ag1620 | 432311 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1620 | 329 | Coils | Coil | 190 | 217 | - | - | |
Cone1ag1620 | 329 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 80 | 276 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone1ag1620 | 329 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 123 | 186 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1620 | 329 | FunFam | probable transcription factor PosF21 | 124 | 177 | - | - | |
Cone1ag1620 | 329 | MobiDBLite | consensus disorder prediction | 60 | 102 | - | - | |
Cone1ag1620 | 329 | CDD | bZIP_plant_RF2 | 126 | 175 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1620 | 329 | SMART | brlzneu | 121 | 185 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1620 | 329 | SUPERFAMILY | Leucine zipper domain | 125 | 179 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1620 | 329 | Gene3D | - | 124 | 177 | - | - | |
Cone1ag1620 | 329 | MobiDBLite | consensus disorder prediction | 240 | 260 | - | - | |
Cone1ag1620 | 329 | MobiDBLite | consensus disorder prediction | 60 | 81 | - | - | |
Cone1ag1620 | 329 | Pfam | bZIP transcription factor | 125 | 173 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone1ag1620 | 329 | MobiDBLite | consensus disorder prediction | 301 | 329 | - | - | |
Cone1ag1620 | 329 | Coils | Coil | 148 | 168 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1620 | Cone-Chr1:57637603 | Cone20ag0385 | Cone-Chr20:1803649 | 4.17E-52 | dispersed | |
Cone1ag0784 | Cone-Chr1:53851457 | Cone1ag1620 | Cone-Chr1:57637603 | 2.20E-31 | wgd | |
Cone1ag1620 | Cone-Chr1:57637603 | Cone5ag0141 | Cone-Chr5:607378 | 1.45E-152 | wgd | |
Cone1ag1620 | Cone-Chr1:57637603 | Cone5ag1039 | Cone-Chr5:4543506 | 1.80E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45532 | PF02875 | Mur_ligase_C | 2.20E-12 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1620 | - | - | - | 0.0 |