Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1626 | ATGAACTACACAGTGATAACGGATAATTTGATTGTCAGGTCCCAGCCTCAGAAACCTGAAGATATAGATCACCTAAAACAGGAAGAGAGCGTGGCTTACATTCTTAATTTGCAGCAGGACAAAGATGTTGAGTATTGGGGAATTGATTTGCAATCTCTGATCAAAAGATGTCAACAACTTGGAATTCGTCATATGAGGAGGTCTGTAAGCAAATTCCCTCTGTTATTACTAATCACTAATCGACAACTATTCGGAATTTATAGAGCTTTATATTACTTGCTTCATCATACGCATATTTGTTTGCTGGCAAGAGATTTCGATCCAGATTCCTTGCGAAGTGGATTACCGAAAGCAGATGGGAAGGGAAAAGTTTATGTTCATTGCACTGCTGGACTTGGAAGAGCCCCTGCCGTCGCAATTGCTTACATGTTCTGGTTTTGTGGAATGAATATGATTTGTTCAAAGAGACCATGTGGACCAAATAAAAGAGCGATTCGTGGATCTACTTATGTTCTCTAG | 519 | 39.69 | MNYTVITDNLIVRSQPQKPEDIDHLKQEESVAYILNLQQDKDVEYWGIDLQSLIKRCQQLGIRHMRRSVSKFPLLLLITNRQLFGIYRALYYLLHHTHICLLARDFDPDSLRSGLPKADGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMNMICSKRPCGPNKRAIRGSTYVL | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57658709 | 57660169 | - | Conep01aG0168900.1 | Cone1ag1626 | 432317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1626 | 172 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 97 | 170 | IPR052832 | GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER) | |
Cone1ag1626 | 172 | Gene3D | Protein tyrosine phosphatase superfamily | 1 | 172 | IPR029021 | - | |
Cone1ag1626 | 172 | CDD | DSP_laforin-like | 1 | 167 | IPR045204 | GO:0019203(InterPro) | |
Cone1ag1626 | 172 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 2 | 151 | IPR029021 | - | |
Cone1ag1626 | 172 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 117 | 143 | IPR000387 | GO:0016311(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1626 | Cone-Chr1:57658709 | Cone5ag0384 | Cone-Chr5:1640964 | 4.51E-21 | dispersed | |
Cone1ag1626 | Cone-Chr1:57658709 | Cone5ag0149 | Cone-Chr5:631863 | 9.63E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1626 | - | - | - | 0.0 |