Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1626 ATGAACTACACAGTGATAACGGATAATTTGATTGTCAGGTCCCAGCCTCAGAAACCTGAAGATATAGATCACCTAAAACAGGAAGAGAGCGTGGCTTACATTCTTAATTTGCAGCAGGACAAAGATGTTGAGTATTGGGGAATTGATTTGCAATCTCTGATCAAAAGATGTCAACAACTTGGAATTCGTCATATGAGGAGGTCTGTAAGCAAATTCCCTCTGTTATTACTAATCACTAATCGACAACTATTCGGAATTTATAGAGCTTTATATTACTTGCTTCATCATACGCATATTTGTTTGCTGGCAAGAGATTTCGATCCAGATTCCTTGCGAAGTGGATTACCGAAAGCAGATGGGAAGGGAAAAGTTTATGTTCATTGCACTGCTGGACTTGGAAGAGCCCCTGCCGTCGCAATTGCTTACATGTTCTGGTTTTGTGGAATGAATATGATTTGTTCAAAGAGACCATGTGGACCAAATAAAAGAGCGATTCGTGGATCTACTTATGTTCTCTAG 519 39.69 MNYTVITDNLIVRSQPQKPEDIDHLKQEESVAYILNLQQDKDVEYWGIDLQSLIKRCQQLGIRHMRRSVSKFPLLLLITNRQLFGIYRALYYLLHHTHICLLARDFDPDSLRSGLPKADGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMNMICSKRPCGPNKRAIRGSTYVL 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57658709 57660169 - Conep01aG0168900.1 Cone1ag1626 432317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1626 172 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 97 170 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Cone1ag1626 172 Gene3D Protein tyrosine phosphatase superfamily 1 172 IPR029021 -
Cone1ag1626 172 CDD DSP_laforin-like 1 167 IPR045204 GO:0019203(InterPro)
Cone1ag1626 172 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 151 IPR029021 -
Cone1ag1626 172 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 117 143 IPR000387 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1626 Cone-Chr1:57658709 Cone5ag0384 Cone-Chr5:1640964 4.51E-21 dispersed
Cone1ag1626 Cone-Chr1:57658709 Cone5ag0149 Cone-Chr5:631863 9.63E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1626 - - - 0.0