Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1631 ATGGGAGCCTCTTCTACTTGTGCGATTGCCTTGATTAGGACAATATTGATCGGTTTGTGTTTGCTTGTAACTCTTATGGGCATTACTGCTCAAGCTCAACTTTCCACAAGCTTCTACTCTAGCTCTTGCCCAAAACTCTTGCCTACTGTGAAATCTGCTGTGCAGTCTGCAATCTCAAAAGAGGCTCGGATGGGGGCTTCTCTCCTCCGCTTGTTCTTCCACGATTGTTTCGTCAATGGATGTGACGGGTCTATTCTACTTGACGACACATCAACTTTCACGGGAGAGAAGAGCGCGGTTCCGAACCAGAACTCCGTCCGGGGGTTCAACGTGGTTGACAGCATAAAGTCAGCCGTCGAGAAAGTCTGTCCCGGAGTGGTCTCTTGTGCTGATATATTAGCTATTACTGCTCGTGATTCTGTAGTCACTCTTGGAGGGCCTAATTGGAATGTAAAACTAGGTAGAAGAGATGCCAAAACTGCAAGTCAGTCTGCTGCCAATAATAACATCCCTCCTCCCACTTCAAGCCTGAGTCAACTCATCTCTAGTTTTAGCAATGTCGGCCTTTCCTCTAAGGATATGATTGCTCTATCTGGGGCTCACACAATTGGACAAGCAAGGTGCACATCATTCCGGGCTCACATATACAACGATTCGAACATCGACAAAACCTTCGCAAGTACGAGACAAGGAAAGTGCCCAAGCACGGCGGGGTCGGGAGACAACAATCTAGCACCACTTGATGTTCAGACTTCTACTAAGTTCGACAACAATTATTACAAGAATCTTGTCCAGAACAAGGGACTTCTCCACTCCGATCAAGAATTGTTCAACAAGGGCTCCGCCGATTCAGTGGTACGTGGCTATAGCACCGGGCAGAGCAGTTTCTTCTCCGATTTTGTTGCCGCCATGATCAAGATGGGAGATATCAGCCCGCTTACCGGATCGAATGGAGAGATTAGGAAGAATTGTCGGAAGACCAATTAA 987 47.32 MGASSTCAIALIRTILIGLCLLVTLMGITAQAQLSTSFYSSSCPKLLPTVKSAVQSAISKEARMGASLLRLFFHDCFVNGCDGSILLDDTSTFTGEKSAVPNQNSVRGFNVVDSIKSAVEKVCPGVVSCADILAITARDSVVTLGGPNWNVKLGRRDAKTASQSAANNNIPPPTSSLSQLISSFSNVGLSSKDMIALSGAHTIGQARCTSFRAHIYNDSNIDKTFASTRQGKCPSTAGSGDNNLAPLDVQTSTKFDNNYYKNLVQNKGLLHSDQELFNKGSADSVVRGYSTGQSSFFSDFVAAMIKMGDISPLTGSNGEIRKNCRKTN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57676451 57677897 - Conep01aG0169400.1 Cone1ag1631 432322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1631 328 Gene3D - 38 325 - -
Cone1ag1631 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cone1ag1631 328 PANTHER PEROXIDASE 72-RELATED 23 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 FunFam Peroxidase 171 307 - -
Cone1ag1631 328 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 SUPERFAMILY Heme-dependent peroxidases 33 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 FunFam Peroxidase 37 180 - -
Cone1ag1631 328 CDD secretory_peroxidase 33 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone1ag1631 328 Gene3D Peroxidase, domain 2 171 307 - -
Cone1ag1631 328 ProSiteProfiles Plant heme peroxidase family profile. 33 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 Pfam Peroxidase 50 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone1ag1631 328 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1631 Cone-Chr1:57676451 Cone7ag0076 Cone-Chr7:326322 2.05E-109 dispersed
Cone14ag0708 Cone-Chr14:3841650 Cone1ag1631 Cone-Chr1:57676451 1.99E-97 transposed
Cone1ag0771 Cone-Chr1:53805768 Cone1ag1631 Cone-Chr1:57676451 4.52E-145 wgd
Cone1ag1631 Cone-Chr1:57676451 Cone10ag0434 Cone-Chr10:2017359 2.64E-141 wgd
Cone1ag1631 Cone-Chr1:57676451 Cone3ag0465 Cone-Chr3:2252239 5.49E-136 wgd
Cone1ag1631 Cone-Chr1:57676451 Cone5ag0153 Cone-Chr5:650032 1.34E-211 wgd
Cone1ag1631 Cone-Chr1:57676451 Cone5ag1048 Cone-Chr5:4588404 6.33E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1631 K00430 - mtr:11440462 482.256