Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1663 ATGCCACTCAACTCTCCATTGTCTCCATTATTCTCACCTGCAATGATTGCTTCAATCTTGCATAACCCATCGGGTTCTTCTCCGGCTTGTTCTTCGCCTAGATCACCACCATCTTCATCTCCATCTCCGTCGAGTACTACTTTAGCTCTTCAGTTTCAGAAACCAACTAATAAAGAAGTCCCCACGACCGGTGCCGGTGCGGTTTGGAACAGGAAAAGACCAGCAAGGATTAACATACCAACTTCCACGTCACTATGTCTCGTTGATGCACCAAAGGATGAGAAAGTAGTAGTAGACACGGTAGAGGTAGAAGGAAATGGTTATTCGGTTTATTGTAAGAGAGGGAGAAGAGGTTACGTAATGGAGGATCGGTATTCGGCCTTAGTCGATCTTCAAGGAGATTCGAAACAAACATTCTTTGGCATGTTTGATGGGCACAAGGGAGAAAAAGCCGCGGAATTTGCCGCGAATAAGATTGGTAAGAACATAATGGATCAAGTGAGTATGAGGAGAGAAGAGGAAGTCAAGGAAGCCATTGAAGATGGGTACTTAATGACGGATAAAGAACATCTAGATGAAGGTATTGGGGGAGGTACTTGTTGTGTAACCGCATTGATCCAAAACGATAACCTCATAGTTTCAAATGCTAGTGATTGTCGTGCCGTTATGAGCATCCGAGGAAATGCAGAAGCCCTAACTTCCGACCACCGCCCTTCGAGAGAAGACGAAAGGAACAGAATTACCACCACGGGCGGTTACATGGATAATTGTCGCGGCGTTTGGAGAATCGAGGGATCTCTAGCCGTATCGAGAGGAATCGGAGATCAACATCTTAAACAATGGGTTATTTCAGAGCCAGAGACTAAAGTAATGAGGATTAATAAATCCGAATGCGAGTTCTTAATACTTGCTTCTGATGGCCTTTGGGATAGGGTTAGTAATCAGGAGGCAGTAGATGTAGTCCGTCGTTCATGCATAGGTGCTGATCCCGACCGTTGTATAGAGTCGAAGAAGTTGTTTTCGGCTTGTAAAGAACTCGTAGAATTGTCTATAACAAGAGGCTCGATGGACGACATAAGTGTTATGATCATTGATTTGGGCTGCTTTTTCTCGTGA 1116 44.53 MPLNSPLSPLFSPAMIASILHNPSGSSPACSSPRSPPSSSPSPSSTTLALQFQKPTNKEVPTTGAGAVWNRKRPARINIPTSTSLCLVDAPKDEKVVVDTVEVEGNGYSVYCKRGRRGYVMEDRYSALVDLQGDSKQTFFGMFDGHKGEKAAEFAANKIGKNIMDQVSMRREEEVKEAIEDGYLMTDKEHLDEGIGGGTCCVTALIQNDNLIVSNASDCRAVMSIRGNAEALTSDHRPSREDERNRITTTGGYMDNCRGVWRIEGSLAVSRGIGDQHLKQWVISEPETKVMRINKSECEFLILASDGLWDRVSNQEAVDVVRRSCIGADPDRCIESKKLFSACKELVELSITRGSMDDISVMIIDLGCFFS 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57808702 57810079 - Conep01aG0172600.1 Cone1ag1663 432354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1663 371 FunFam probable protein phosphatase 2C 25 100 369 - -
Cone1ag1663 371 Gene3D - 107 368 IPR036457 -
Cone1ag1663 371 Pfam Protein phosphatase 2C 122 359 IPR001932 -
Cone1ag1663 371 ProSiteProfiles PPM-type phosphatase domain profile. 107 366 IPR001932 -
Cone1ag1663 371 CDD PP2Cc 106 366 IPR001932 -
Cone1ag1663 371 SUPERFAMILY PP2C-like 107 367 IPR036457 -
Cone1ag1663 371 PANTHER PROTEIN PHOSPHATASE 94 365 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone1ag1663 371 SMART PP2C_4 100 364 IPR001932 -
Cone1ag1663 371 MobiDBLite consensus disorder prediction 23 47 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1663 Cone-Chr1:57808702 Cone7ag0053 Cone-Chr7:230820 4.85E-119 dispersed
Cone1ag1663 Cone-Chr1:57808702 Cone5ag0192 Cone-Chr5:795244 9.12E-229 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1663 K17506 - mdm:114825896 382.489