Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag1676 | ATGGCTACCAGTTTCACTCTGCTTCAATCCACTTCTTCATTCTCAACCCAATCAGCCTTCCAACCTAAATTTCACTCCCACAGATTGAAATCCACTCGGCCGTTTTCTACTTTATGCCCCCCACCAAGGCTGAAAGGAACGTCTGGTTTATGTGTAATCAAATGTGCTTCTTCAAATGGGCGAGAGCCTGAGGCGGTGGATAATGGGGTTAAGAGCGCAGAAAAGCTTCTCAGAGAGAAGCGCCGAGCCGAGTTGTCCGCTTGGATTGCCTCTGGAGAATTCACTGTCAATCAATCTGGTTTTCCATCTCTGCTGAAGAATGGCTTGTCAAAGCTGGGCCTTCCAGACGATGTTCTGAATTCATTTCTGATAGCTTCCGATCCTTCCATTGCTAAACATATATTAAAGGACAATTCGAAGGCCTATTCCAAGGGTATTTTGGCCGAAATTTTAAATTTTGTGATGGGGACTGGACTCATCCCAGCTGATGGGGAGATTTGGCATGCTCGTCGAAGAACTATAGTTCCTGCATTGCAGCTCAAGTATGTAGCAGCTATGATCAATCTTTTCGGACAAGCTACAGATTGGCTTTGCAGTAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTAGAGATGGAGTCTCTTTTTTCCCGTTTGACTTTGGATACCATCGGCAGAGCTGTATTTAACTATGATTTTGATTCATTAACCACTGATACTGGAATCGTTGAGGCTGTTTATACTGTCCTGAGAGAAGCAGAAGATAGAAGTACTGCATCAATTCCTAGGATGGTTGATGAAGAAGAGTTACAGTTTCACGAGGAATACATGAATGAACAAGATCCAATCATACTTGACTTCCTTTTGGCTTCAGGCGATGATGAAGCTGGGCATGAGACATCAGCCGCAGAACATGGACCTTTTTTCTTCTTTCCAAGGAACCTAGGGTGGTGGCCAAGCTTCAAGAGTAGGTTGATTCGGTTCCAGGGTCTGAGGCTTTATCTGCAGCCACCAGTGTTGATACACCGATCTCTTGAGAATGACATGTTGGGAAAGGGCAATGATACTTTTATTTCTGTATGGAATCTGCATCGCAGTGCAAAACATTGGGAGGATGCAGATAAGTTTAACCCCGAAAGATGGCTGTTAGATGGATCCAATCCAAATTACACAAACCAAAATTTCAGTTACTTACCCTTTGGCGGAGGGCTGCGGAAATGCATCGGGGACATGTTCGCTTCATATGAGTTGCAGTTGCAATGCTTATTCGCCGGTTTTAACTTTCAACTAGCTGTTGGAGCACCTCCGGTAGAGATTACTAAAGGAGCAAGAATACACACGACGCAAGGGTTGAAGATGACTGTAACAAGAAGAGAGAAACCCATCATTATGCCCACATTGGAAGCTGATGATTCTTCTTCATCTTTCATCTTCATCGGCTTCTATACCCGTCTTGAATGGGGACCCACTCCGTGCTCGGAAAGGGCAAGCATCCTCTCTGCTCAGTCCTAA | 1515 | 44.82 | MATSFTLLQSTSSFSTQSAFQPKFHSHRLKSTRPFSTLCPPPRLKGTSGLCVIKCASSNGREPEAVDNGVKSAEKLLREKRRAELSAWIASGEFTVNQSGFPSLLKNGLSKLGLPDDVLNSFLIASDPSIAKHILKDNSKAYSKGILAEILNFVMGTGLIPADGEIWHARRRTIVPALQLKYVAAMINLFGQATDWLCSKLDAAASDGEDVEMESLFSRLTLDTIGRAVFNYDFDSLTTDTGIVEAVYTVLREAEDRSTASIPRMVDEEELQFHEEYMNEQDPIILDFLLASGDDEAGHETSAAEHGPFFFFPRNLGWWPSFKSRLIRFQGLRLYLQPPVLIHRSLENDMLGKGNDTFISVWNLHRSAKHWEDADKFNPERWLLDGSNPNYTNQNFSYLPFGGGLRKCIGDMFASYELQLQCLFAGFNFQLAVGAPPVEITKGARIHTTQGLKMTVTRREKPIIMPTLEADDSSSSFIFIGFYTRLEWGPTPCSERASILSAQS | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 57893978 | 57897679 | - | Conep01aG0173900.1 | Cone1ag1676 | 432367 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag1676 | 504 | Pfam | Cytochrome P450 | 122 | 255 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | Pfam | Cytochrome P450 | 349 | 430 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | PRINTS | E-class P450 group I signature | 398 | 408 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | PRINTS | E-class P450 group I signature | 360 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | PRINTS | E-class P450 group I signature | 408 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | SUPERFAMILY | Cytochrome P450 | 122 | 459 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 401 | 410 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone1ag1676 | 504 | Gene3D | Cytochrome P450 | 331 | 462 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag1676 | 504 | PANTHER | CYTOCHROME P450 FAMILY 4 | 332 | 437 | IPR050196 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER) | |
| Cone1ag1676 | 504 | Gene3D | Cytochrome P450 | 118 | 303 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag1676 | Cone-Chr1:57893978 | Cone2ag0555 | Cone-Chr2:3128428 | 1.43E-08 | dispersed | |
| Cone1ag1676 | Cone-Chr1:57893978 | Cone5ag0921 | Cone-Chr5:3943056 | 5.92E-250 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag1676 | K15747 | - | csv:101215492 | 568.155 |