Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1676 ATGGCTACCAGTTTCACTCTGCTTCAATCCACTTCTTCATTCTCAACCCAATCAGCCTTCCAACCTAAATTTCACTCCCACAGATTGAAATCCACTCGGCCGTTTTCTACTTTATGCCCCCCACCAAGGCTGAAAGGAACGTCTGGTTTATGTGTAATCAAATGTGCTTCTTCAAATGGGCGAGAGCCTGAGGCGGTGGATAATGGGGTTAAGAGCGCAGAAAAGCTTCTCAGAGAGAAGCGCCGAGCCGAGTTGTCCGCTTGGATTGCCTCTGGAGAATTCACTGTCAATCAATCTGGTTTTCCATCTCTGCTGAAGAATGGCTTGTCAAAGCTGGGCCTTCCAGACGATGTTCTGAATTCATTTCTGATAGCTTCCGATCCTTCCATTGCTAAACATATATTAAAGGACAATTCGAAGGCCTATTCCAAGGGTATTTTGGCCGAAATTTTAAATTTTGTGATGGGGACTGGACTCATCCCAGCTGATGGGGAGATTTGGCATGCTCGTCGAAGAACTATAGTTCCTGCATTGCAGCTCAAGTATGTAGCAGCTATGATCAATCTTTTCGGACAAGCTACAGATTGGCTTTGCAGTAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTAGAGATGGAGTCTCTTTTTTCCCGTTTGACTTTGGATACCATCGGCAGAGCTGTATTTAACTATGATTTTGATTCATTAACCACTGATACTGGAATCGTTGAGGCTGTTTATACTGTCCTGAGAGAAGCAGAAGATAGAAGTACTGCATCAATTCCTAGGATGGTTGATGAAGAAGAGTTACAGTTTCACGAGGAATACATGAATGAACAAGATCCAATCATACTTGACTTCCTTTTGGCTTCAGGCGATGATGAAGCTGGGCATGAGACATCAGCCGCAGAACATGGACCTTTTTTCTTCTTTCCAAGGAACCTAGGGTGGTGGCCAAGCTTCAAGAGTAGGTTGATTCGGTTCCAGGGTCTGAGGCTTTATCTGCAGCCACCAGTGTTGATACACCGATCTCTTGAGAATGACATGTTGGGAAAGGGCAATGATACTTTTATTTCTGTATGGAATCTGCATCGCAGTGCAAAACATTGGGAGGATGCAGATAAGTTTAACCCCGAAAGATGGCTGTTAGATGGATCCAATCCAAATTACACAAACCAAAATTTCAGTTACTTACCCTTTGGCGGAGGGCTGCGGAAATGCATCGGGGACATGTTCGCTTCATATGAGTTGCAGTTGCAATGCTTATTCGCCGGTTTTAACTTTCAACTAGCTGTTGGAGCACCTCCGGTAGAGATTACTAAAGGAGCAAGAATACACACGACGCAAGGGTTGAAGATGACTGTAACAAGAAGAGAGAAACCCATCATTATGCCCACATTGGAAGCTGATGATTCTTCTTCATCTTTCATCTTCATCGGCTTCTATACCCGTCTTGAATGGGGACCCACTCCGTGCTCGGAAAGGGCAAGCATCCTCTCTGCTCAGTCCTAA 1515 44.82 MATSFTLLQSTSSFSTQSAFQPKFHSHRLKSTRPFSTLCPPPRLKGTSGLCVIKCASSNGREPEAVDNGVKSAEKLLREKRRAELSAWIASGEFTVNQSGFPSLLKNGLSKLGLPDDVLNSFLIASDPSIAKHILKDNSKAYSKGILAEILNFVMGTGLIPADGEIWHARRRTIVPALQLKYVAAMINLFGQATDWLCSKLDAAASDGEDVEMESLFSRLTLDTIGRAVFNYDFDSLTTDTGIVEAVYTVLREAEDRSTASIPRMVDEEELQFHEEYMNEQDPIILDFLLASGDDEAGHETSAAEHGPFFFFPRNLGWWPSFKSRLIRFQGLRLYLQPPVLIHRSLENDMLGKGNDTFISVWNLHRSAKHWEDADKFNPERWLLDGSNPNYTNQNFSYLPFGGGLRKCIGDMFASYELQLQCLFAGFNFQLAVGAPPVEITKGARIHTTQGLKMTVTRREKPIIMPTLEADDSSSSFIFIGFYTRLEWGPTPCSERASILSAQS 504
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 57893978 57897679 - Conep01aG0173900.1 Cone1ag1676 432367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1676 504 Pfam Cytochrome P450 122 255 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 Pfam Cytochrome P450 349 430 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 SUPERFAMILY Cytochrome P450 122 459 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone1ag1676 504 Gene3D Cytochrome P450 331 462 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone1ag1676 504 PANTHER CYTOCHROME P450 FAMILY 4 332 437 IPR050196 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER)
Cone1ag1676 504 Gene3D Cytochrome P450 118 303 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1676 Cone-Chr1:57893978 Cone2ag0555 Cone-Chr2:3128428 1.43E-08 dispersed
Cone1ag1676 Cone-Chr1:57893978 Cone5ag0921 Cone-Chr5:3943056 5.92E-250 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1676 K15747 - csv:101215492 568.155