Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1691 ATGAAGCCTCAATGTTCGCCAAGATCAAGTGGAAATAAAGTGAGATACTTGTGTCCCGAGCCATATCCAGAAGAAAATTTGGAGTTTCTTCGAGCTCAAAATATTAAGCTTTTTCAATTCGGGATCGAAGGGAAAACGGAGCCCTTTGGATCTATGCCCATGGATACTATCATGGAAGCTCTCAAAGTCTTAATCGATGTCAGAAATCATCCCATCTTGATCCATTGCAAGCGTGGAAAGCATCGAACCGGGTGTCTTGTGGGTTGCATGAGAAAGTTCCAGAACTGGTGTCTATCTTCCGTGTTCGAAGAGTACAAGTGTTTTGCAGGAGTGAAATCACGGACCACAGATCTGAGGTTCATCGAGAGTTTCAACATAATGCACATAAGGCAATGTCTTTACAGCATCTTATACCAGTATCAGGGATATGGTTCCAACAAGAGGAGGCTCATGTACAGAGAAGAGAATGTGCAGAAGGCTCAAGTTACTACTGTTTAG 498 42.97 MKPQCSPRSSGNKVRYLCPEPYPEENLEFLRAQNIKLFQFGIEGKTEPFGSMPMDTIMEALKVLIDVRNHPILIHCKRGKHRTGCLVGCMRKFQNWCLSSVFEEYKCFAGVKSRTTDLRFIESFNIMHIRQCLYSILYQYQGYGSNKRRLMYREENVQKAQVTTV 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57943849 57948055 + Conep01aG0175400.1 Cone1ag1691 432382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1691 165 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 157 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Cone1ag1691 165 FunFam Tyrosine phosphatase, putative 12 127 - -
Cone1ag1691 165 ProSitePatterns Tyrosine specific protein phosphatases active site. 74 84 IPR016130 GO:0016311(InterPro)
Cone1ag1691 165 Pfam Tyrosine phosphatase family 15 128 IPR004861 -
Cone1ag1691 165 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 124 IPR029021 -
Cone1ag1691 165 PRINTS Plant and fungal dual specificity phosphatase signature 16 29 IPR020428 GO:0016791(InterPro)
Cone1ag1691 165 PRINTS Plant and fungal dual specificity phosphatase signature 52 66 IPR020428 GO:0016791(InterPro)
Cone1ag1691 165 PRINTS Plant and fungal dual specificity phosphatase signature 35 49 IPR020428 GO:0016791(InterPro)
Cone1ag1691 165 Gene3D Protein tyrosine phosphatase superfamily 11 127 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1691 Cone-Chr1:57943849 Cone5ag1838 Cone-Chr5:12920068 4.91E-58 dispersed
Cone1ag1691 Cone-Chr1:57943849 Cone5ag0937 Cone-Chr5:4009079 5.96E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1691 K18045 - mdm:103434267 263.848