Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1691 | ATGAAGCCTCAATGTTCGCCAAGATCAAGTGGAAATAAAGTGAGATACTTGTGTCCCGAGCCATATCCAGAAGAAAATTTGGAGTTTCTTCGAGCTCAAAATATTAAGCTTTTTCAATTCGGGATCGAAGGGAAAACGGAGCCCTTTGGATCTATGCCCATGGATACTATCATGGAAGCTCTCAAAGTCTTAATCGATGTCAGAAATCATCCCATCTTGATCCATTGCAAGCGTGGAAAGCATCGAACCGGGTGTCTTGTGGGTTGCATGAGAAAGTTCCAGAACTGGTGTCTATCTTCCGTGTTCGAAGAGTACAAGTGTTTTGCAGGAGTGAAATCACGGACCACAGATCTGAGGTTCATCGAGAGTTTCAACATAATGCACATAAGGCAATGTCTTTACAGCATCTTATACCAGTATCAGGGATATGGTTCCAACAAGAGGAGGCTCATGTACAGAGAAGAGAATGTGCAGAAGGCTCAAGTTACTACTGTTTAG | 498 | 42.97 | MKPQCSPRSSGNKVRYLCPEPYPEENLEFLRAQNIKLFQFGIEGKTEPFGSMPMDTIMEALKVLIDVRNHPILIHCKRGKHRTGCLVGCMRKFQNWCLSSVFEEYKCFAGVKSRTTDLRFIESFNIMHIRQCLYSILYQYQGYGSNKRRLMYREENVQKAQVTTV | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57943849 | 57948055 | + | Conep01aG0175400.1 | Cone1ag1691 | 432382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1691 | 165 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 14 | 157 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
Cone1ag1691 | 165 | FunFam | Tyrosine phosphatase, putative | 12 | 127 | - | - | |
Cone1ag1691 | 165 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 74 | 84 | IPR016130 | GO:0016311(InterPro) | |
Cone1ag1691 | 165 | Pfam | Tyrosine phosphatase family | 15 | 128 | IPR004861 | - | |
Cone1ag1691 | 165 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 14 | 124 | IPR029021 | - | |
Cone1ag1691 | 165 | PRINTS | Plant and fungal dual specificity phosphatase signature | 16 | 29 | IPR020428 | GO:0016791(InterPro) | |
Cone1ag1691 | 165 | PRINTS | Plant and fungal dual specificity phosphatase signature | 52 | 66 | IPR020428 | GO:0016791(InterPro) | |
Cone1ag1691 | 165 | PRINTS | Plant and fungal dual specificity phosphatase signature | 35 | 49 | IPR020428 | GO:0016791(InterPro) | |
Cone1ag1691 | 165 | Gene3D | Protein tyrosine phosphatase superfamily | 11 | 127 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1691 | Cone-Chr1:57943849 | Cone5ag1838 | Cone-Chr5:12920068 | 4.91E-58 | dispersed | |
Cone1ag1691 | Cone-Chr1:57943849 | Cone5ag0937 | Cone-Chr5:4009079 | 5.96E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1691 | K18045 | - | mdm:103434267 | 263.848 |