Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1727 ATGAATGGCCTCACCTCTCTTCAGCCAGATTACTCAGAGTTTGTTGAACTCGATCCAACTGGCAGATATGGCAGATATAACGAAATCCTTGGCAAAGGAGCTTCCAAAACAGTTTACAGAGCATTTGATGAGTATGAAGGGATTGAAGTTGCCTGGAATCAGGTCAAGCTCTATGATTTTCTACAAAGCCCAGAAGATCTGGAGAGACTTTACAGTGAGATCCATCTGCTCAAAACATTAAAGCATAAGAATATTATGAAATTCTACACCTCTTGGGTTGATACTGCTAATAGGAACATCAATTTTGTCACTGAAATGTTCACTTCTGGAACTCTCAGACGGCTAAAGCACAGGAGAGTTAACATTAGAGCAGTGAAGCATTGGTGTAGACAGATTTTGAAAGGTCTTCTCTACTTACATAGCCATGATCCTCCTGTTATCCATAGAGATCTAAAGTGTGACAATATCTTCATTAATGGGAATCAAGGGGAAGTCAAAATTGGAGATCTTGGCCTCGCTGCCGTTCTCAGAAAATCTCATGCTGCTCATTGTGTTGGGACACCTGAGTTTATGGCACCAGAAGTGTACGAAGAGGCTTATAATGAATTAGTTGATATTTATTCTTTTGGAATGTGCATCTTGGAAATGGTTACTTTTGAATATCCTTATAGTGAATGTACTCATCCTGCTCAGATATACAAGAAAGTTATTTCCGGGAAAAAGCCAGATGCTTTGTACAAAGTGAAGGATCCAGAAGTGAGACAATTTGTTGAAAAATGCTTGGCAACAGTGTCACTTAGGCTTTCAGCTGGGGAGCTACTAGACGACCCGTTTCTTCAGATCGATGACTGTGAACACGATTCAAGACCCTTGCTTTGTAGAAGAGAGTTTGATAATATAAGTCCTATTGTGACACAGCCTTTCCTTGAATTTAATGGAAGTAAAACCAGCACCATTGGTAATGGATATTCAAATGAATATTGCTGTGAATCGTATAATGAATGGGCGTACCAACCAATCGAAAACAATCTTCCTGGACTTGAACTATTCAACTACCATGATGATAATGACGATGATCATTTAGAAGATATTGATGTGAGCATTAAAGGCAAGATGGGAGAAGATGGTAGCATCTTTTTAAGACTCCGAATTGCCGATAAAGAAGGCCCTACCCGGAACATTTATTTCCCATTTGACATTGAAATGGACACGGCATTAAGCGTAGCAACTGAAATGGTAGCCGAGCTTGATATGATGGACCATGATGTGACCAGAATAGCTGATATGATTGATGGTGAGATCGTTTCCTTGGTGGCTGAATGGAGTTCTGGCCCAGGATTAGAGGAAACTCCTAGATTTACTCCAACCCAAAATGTATGCCGCAATTGTGTTTCTAATCACACATCGGATGGTTACTTGGGGGAGGATTTGTTGATGAATAATAATAATAATATCCATAATGTATCAAAGAACTTAGAGGTTCGTCCATGCTGTAGAAATGGATGCACTTCAATGTGCGGCCGGTTTGAGGAGATTATGTATTTTGCCGAAGGTGCACCAAATGGTTCTGTGAGCTCTGGACAGAGCCATTTTGACGAGGAGTGCGATAGAGCAGGTGGGCCTGATCCGACTATGGATGAGAGAAAAGAGAAATTGTTGGAAACTGGGATTAGGAATGAATTGGATCCGCCTTTGTGCGGTGATGCGGGGCCTATAGATGAAAGAGAAATCCAGCAGGAAATGAGATGGATAAGGGCAAAGTACCAAATCGAGTTGAGGGAACTTAGGGATGAACAGTTTGGGGTTATCGTAAAATCTTCGGCTTTCAGAAACAGAGAACATAAATCGGAGAATGGAATTTCAGTGCCGTCTTTACTACACGATTATGACCATATGTGCTGCCCCAATTTAGAAACCCAACGGGCTCGAATCAGAGCTTGCTCTTTGCTTCCGATTTCTATCCACAGGTCGGTTTCCCTCCCGGTTGATGCCGTCAGTATATAA 2004 41.42 MNGLTSLQPDYSEFVELDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRRLKHRRVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAVLRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSAGELLDDPFLQIDDCEHDSRPLLCRREFDNISPIVTQPFLEFNGSKTSTIGNGYSNEYCCESYNEWAYQPIENNLPGLELFNYHDDNDDDHLEDIDVSIKGKMGEDGSIFLRLRIADKEGPTRNIYFPFDIEMDTALSVATEMVAELDMMDHDVTRIADMIDGEIVSLVAEWSSGPGLEETPRFTPTQNVCRNCVSNHTSDGYLGEDLLMNNNNNIHNVSKNLEVRPCCRNGCTSMCGRFEEIMYFAEGAPNGSVSSGQSHFDEECDRAGGPDPTMDERKEKLLETGIRNELDPPLCGDAGPIDEREIQQEMRWIRAKYQIELRELRDEQFGVIVKSSAFRNREHKSENGISVPSLLHDYDHMCCPNLETQRARIRACSLLPISIHRSVSLPVDAVSI 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58069521 58072605 + Conep01aG0179100.1 Cone1ag1727 432418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1727 667 Pfam Protein kinase domain 27 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag1727 667 Gene3D Transferase(Phosphotransferase) domain 1 108 284 - -
Cone1ag1727 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1727 667 SMART serkin_6 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag1727 667 MobiDBLite consensus disorder prediction 530 546 - -
Cone1ag1727 667 FunFam probable serine/threonine-protein kinase WNK9 107 284 - -
Cone1ag1727 667 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Cone1ag1727 667 CDD STKc_WNK 22 279 - -
Cone1ag1727 667 SUPERFAMILY Protein kinase-like (PK-like) 27 280 IPR011009 -
Cone1ag1727 667 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 432 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cone1ag1727 667 Gene3D - 376 444 - -
Cone1ag1727 667 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag1727 667 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Cone1ag1727 667 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 476 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone1ag1727 667 MobiDBLite consensus disorder prediction 525 546 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1727 Cone-Chr1:58069521 Cone7ag0248 Cone-Chr7:1045463 1.84E-228 dispersed
Cone1ag1727 Cone-Chr1:58069521 Cone10ag0695 Cone-Chr10:3509380 5.49E-154 wgd
Cone1ag1727 Cone-Chr1:58069521 Cone3ag0714 Cone-Chr3:3663301 4.14E-206 wgd
Cone1ag1727 Cone-Chr1:58069521 Cone5ag0535 Cone-Chr5:2272794 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82521 PF03469 XH 4.20E-53 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1727 K08867 - cit:102607812 863.603