Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1727 | ATGAATGGCCTCACCTCTCTTCAGCCAGATTACTCAGAGTTTGTTGAACTCGATCCAACTGGCAGATATGGCAGATATAACGAAATCCTTGGCAAAGGAGCTTCCAAAACAGTTTACAGAGCATTTGATGAGTATGAAGGGATTGAAGTTGCCTGGAATCAGGTCAAGCTCTATGATTTTCTACAAAGCCCAGAAGATCTGGAGAGACTTTACAGTGAGATCCATCTGCTCAAAACATTAAAGCATAAGAATATTATGAAATTCTACACCTCTTGGGTTGATACTGCTAATAGGAACATCAATTTTGTCACTGAAATGTTCACTTCTGGAACTCTCAGACGGCTAAAGCACAGGAGAGTTAACATTAGAGCAGTGAAGCATTGGTGTAGACAGATTTTGAAAGGTCTTCTCTACTTACATAGCCATGATCCTCCTGTTATCCATAGAGATCTAAAGTGTGACAATATCTTCATTAATGGGAATCAAGGGGAAGTCAAAATTGGAGATCTTGGCCTCGCTGCCGTTCTCAGAAAATCTCATGCTGCTCATTGTGTTGGGACACCTGAGTTTATGGCACCAGAAGTGTACGAAGAGGCTTATAATGAATTAGTTGATATTTATTCTTTTGGAATGTGCATCTTGGAAATGGTTACTTTTGAATATCCTTATAGTGAATGTACTCATCCTGCTCAGATATACAAGAAAGTTATTTCCGGGAAAAAGCCAGATGCTTTGTACAAAGTGAAGGATCCAGAAGTGAGACAATTTGTTGAAAAATGCTTGGCAACAGTGTCACTTAGGCTTTCAGCTGGGGAGCTACTAGACGACCCGTTTCTTCAGATCGATGACTGTGAACACGATTCAAGACCCTTGCTTTGTAGAAGAGAGTTTGATAATATAAGTCCTATTGTGACACAGCCTTTCCTTGAATTTAATGGAAGTAAAACCAGCACCATTGGTAATGGATATTCAAATGAATATTGCTGTGAATCGTATAATGAATGGGCGTACCAACCAATCGAAAACAATCTTCCTGGACTTGAACTATTCAACTACCATGATGATAATGACGATGATCATTTAGAAGATATTGATGTGAGCATTAAAGGCAAGATGGGAGAAGATGGTAGCATCTTTTTAAGACTCCGAATTGCCGATAAAGAAGGCCCTACCCGGAACATTTATTTCCCATTTGACATTGAAATGGACACGGCATTAAGCGTAGCAACTGAAATGGTAGCCGAGCTTGATATGATGGACCATGATGTGACCAGAATAGCTGATATGATTGATGGTGAGATCGTTTCCTTGGTGGCTGAATGGAGTTCTGGCCCAGGATTAGAGGAAACTCCTAGATTTACTCCAACCCAAAATGTATGCCGCAATTGTGTTTCTAATCACACATCGGATGGTTACTTGGGGGAGGATTTGTTGATGAATAATAATAATAATATCCATAATGTATCAAAGAACTTAGAGGTTCGTCCATGCTGTAGAAATGGATGCACTTCAATGTGCGGCCGGTTTGAGGAGATTATGTATTTTGCCGAAGGTGCACCAAATGGTTCTGTGAGCTCTGGACAGAGCCATTTTGACGAGGAGTGCGATAGAGCAGGTGGGCCTGATCCGACTATGGATGAGAGAAAAGAGAAATTGTTGGAAACTGGGATTAGGAATGAATTGGATCCGCCTTTGTGCGGTGATGCGGGGCCTATAGATGAAAGAGAAATCCAGCAGGAAATGAGATGGATAAGGGCAAAGTACCAAATCGAGTTGAGGGAACTTAGGGATGAACAGTTTGGGGTTATCGTAAAATCTTCGGCTTTCAGAAACAGAGAACATAAATCGGAGAATGGAATTTCAGTGCCGTCTTTACTACACGATTATGACCATATGTGCTGCCCCAATTTAGAAACCCAACGGGCTCGAATCAGAGCTTGCTCTTTGCTTCCGATTTCTATCCACAGGTCGGTTTCCCTCCCGGTTGATGCCGTCAGTATATAA | 2004 | 41.42 | MNGLTSLQPDYSEFVELDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRRLKHRRVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAVLRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSAGELLDDPFLQIDDCEHDSRPLLCRREFDNISPIVTQPFLEFNGSKTSTIGNGYSNEYCCESYNEWAYQPIENNLPGLELFNYHDDNDDDHLEDIDVSIKGKMGEDGSIFLRLRIADKEGPTRNIYFPFDIEMDTALSVATEMVAELDMMDHDVTRIADMIDGEIVSLVAEWSSGPGLEETPRFTPTQNVCRNCVSNHTSDGYLGEDLLMNNNNNIHNVSKNLEVRPCCRNGCTSMCGRFEEIMYFAEGAPNGSVSSGQSHFDEECDRAGGPDPTMDERKEKLLETGIRNELDPPLCGDAGPIDEREIQQEMRWIRAKYQIELRELRDEQFGVIVKSSAFRNREHKSENGISVPSLLHDYDHMCCPNLETQRARIRACSLLPISIHRSVSLPVDAVSI | 667 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 58069521 | 58072605 | + | Conep01aG0179100.1 | Cone1ag1727 | 432418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1727 | 667 | Pfam | Protein kinase domain | 27 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1727 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 108 | 284 | - | - | |
Cone1ag1727 | 667 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1727 | 667 | SMART | serkin_6 | 24 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1727 | 667 | MobiDBLite | consensus disorder prediction | 530 | 546 | - | - | |
Cone1ag1727 | 667 | FunFam | probable serine/threonine-protein kinase WNK9 | 107 | 284 | - | - | |
Cone1ag1727 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 105 | - | - | |
Cone1ag1727 | 667 | CDD | STKc_WNK | 22 | 279 | - | - | |
Cone1ag1727 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 27 | 280 | IPR011009 | - | |
Cone1ag1727 | 667 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 379 | 432 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Cone1ag1727 | 667 | Gene3D | - | 376 | 444 | - | - | |
Cone1ag1727 | 667 | ProSiteProfiles | Protein kinase domain profile. | 24 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1727 | 667 | FunFam | Probable serine/threonine-protein kinase WNK1 | 9 | 105 | - | - | |
Cone1ag1727 | 667 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 13 | 476 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Cone1ag1727 | 667 | MobiDBLite | consensus disorder prediction | 525 | 546 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1727 | Cone-Chr1:58069521 | Cone7ag0248 | Cone-Chr7:1045463 | 1.84E-228 | dispersed | |
Cone1ag1727 | Cone-Chr1:58069521 | Cone10ag0695 | Cone-Chr10:3509380 | 5.49E-154 | wgd | |
Cone1ag1727 | Cone-Chr1:58069521 | Cone3ag0714 | Cone-Chr3:3663301 | 4.14E-206 | wgd | |
Cone1ag1727 | Cone-Chr1:58069521 | Cone5ag0535 | Cone-Chr5:2272794 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82521 | PF03469 | XH | 4.20E-53 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1727 | K08867 | - | cit:102607812 | 863.603 |