Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1732 | ATGAAGCACATTTTCAAGAAGCTTCATATAGGAAGCAACCACGAGCCAAATCGATCAAATGAATCTCCTACTGCTTCTGTTACATCTCCGTCACATGCGCCCGATCAACGTACATCCTCTGGTCAGACCTCCGCCAACTCTGAGGCCAGTCCTTCGTCCTCGTCTCCATCTGTGGCAACCGTTCCTGCAGGTGGAAACACTGCTACGCCAGCTTCTCCGGCTTCAAATCGACCCGATTATATTTCCTCAGAAGAGGAGTTTCAGGTTCAGCTTGCCCTAGCGATCAGTGCCTCGAATTCAGACTTTCGGGACGATCCGGAGAAAGATCAGATTCGAGCTGCGACGCTGCTTAGCTTGGGGAGCAATCGAATAGATACAGTGGCCAGAGATAGAGATGAGGCTGCGGAAGCGTTGTCGAGGCAGTATTGGGAATATAATCTGATAGACTACGAAGAGAAAGTGATGGATGGATTCTATGACGTCTATGGGATTTCCACAACAATCCAAGGAAAAATGCCTAGTCTGACTGATCTTGAATCAAGCCATGGTAGTTCTGGCTATGAAGCTGTAGTTGTTAATATAGCAATTGATCATGCTCTTGGAGAGCTTGTGCAAATTGCTCAGTGCATTGCTGATTGTCCAGGCACTGAGATAGGTGTTTTAGTACAGAGGCTTGCCGAACTTGTAACAGGGCATATGGGTGGACCTGTGAAGGATCCTAATATTATGTTATCAAGGTGGATGGAAAGAAGCACCGAGTTGAGGACATCACTTCACACCAGCATCTTGCCTATTGGGTCTATTAATATTGGCCTCTTACGCCACCGTGCTTTGCTTTTCAAGGTGTTAGCTGACAAAATCAGGATGCCTTGTAGACTGGTAAAAGGTTGTCATTACACTGGCATTGAGGATGATGCTGTCAACCTTATAAAACTGGAGGATGAAAGGGAATATTTGATCGACCTAATGGCAGCCCCAGGAGCTCTTATACCAACTGATATATTAACTGCAAAGGACACCAGCTCTAACCCATACAACCCTAAAATAATTAAGCCGCCGACTCTCCATACCTTAAACAGCAGAATTTCTTTCTCAAAACCAACATCATCACCTGATGAAGGTAGCAGTCCAAGCTCTATAGCGGAAAGTAGTTTTCTGCTGGATGGAAAACAAAGGTTTGGAAATTCAGAACTTGTGCCATCATTCTTTAGTAAAAATGGTGATATTGGTGCTCCTCCTAGAGCACCAAATATAGGAACTTCGGGTCACATGGATACCATTTCCTCGTCAGGCATTGGAACTTCTCGGTACAAAGGGGGCCGTGCAGTTAATGGTGGTGTTAGGATGAATGTCAATGTAGTGCCATATGGCCAAAACACCCCAGAGGATTCTAAAAACCTTTTCGCAGATCTTAAGCCATTCCAGATTAAAGGAACTGGAAAGTCTGTTGTACACAATAAGCCCACGGATAATAAAGTTGATGAGCTTCAGGGACTGAGAAACAACCCTGTCCCTGGTCGACCACCTGTACCACAAATGTGGAAGAATCGACAGGCTTACAATGAAGTTCCTGGGAAAAAAGGGTATGATTATGTGGGGGGCCTTGTTCCAAGAATTAAGAATGAACCTACAGATTATAATACATTGATGTCATCTTCTTCCAGCTCCACCACATCTGAGATGATCAATTCTGATGGTTTTAAAATATCTGGTAATACAAAAATCCGAGGCAGAAATATTGATGCTAGAAACTCAAAATCTGCTACCAGTTCAGAATCGGCACCTGGTACAAGTCGGCTCAGTAAGTTACCTTTTGTTGAGGAACAGAACAATAAATCAACTGGAGAACATCCTGAAAATGGGGAGAACATGCAGAATGAAAAATTTAATTTGGACGGAGAAAATGAAAATATAATTGGGTTCCAAGATCGAAGAAAAAACATATTTATGGGTACTAGTTTAAAATTAATGGATTCGGAAAGTCCCAGCTCATCTGTTGATTCAAATAAGAGTAGGACCGAGCAAGTATTTGATGACGTAGATGTGAGTGAATGTGAAATCCATTGGGAAGATCTGGTTATTGGTGAAAGAATTGGACTAGGTTCCTATGGAGAGGTCTACCATGCTGATTGGAATGACACGGAAGTTGCTGTAAAGAAGTTCTTGGACCAGGACTTTTCAGGTGCTGCTTTAGCCGAGTTCAGAAGAGAAGTAAAAATAATGCGACGTTTGCGTCATCCAAATGTTGTTCTTTTCATGGGTGCTGTTACTCGTCCTCCAAACCTCTCCATCATCACTGAGTTTCTTCCAAGAGGAAGCTTGTATCGGATAATACACCGCCCTCATTGTCAAGTTGATGAGAAGCGGAGAATAAAAATGGCTCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTACACCAACTATTGTCCACCGGGATCTGAAGTCACCAAATCTCTTGGTTGATAAGAGCTGGAATGTGAAGGTAGGTGATTTTGGGTTGTCACGCTTGAAGCACAATACCTTCTTGTCATCAAAATCCACTGGAGGAACGCCTGAGTGGATGGCACCCGAAGTTCTTCGTAATGAACCCTCAAATGAGAAATGTGATGTATATAGCTTTGGAGTCATTCTATGGGAGCTTGCTACTTTGAGGCTACCTTGGAGTGGGATGAACCCGATGCAAGTTGTTGGTGCAGTAGGGTTCCAAAACCGCCGCCTTGAAATCCCGAAAGAAGTTGACCCCTTGGTAGCAAGGATAATTTTTGAATGTTGGCAAACGGAGCCGAATTTACGCCCCTCATTTGCTCAGCTCACGGTAGCACTCAAGCCCTTGCAGCGACTCGTTATTTCCTCACATCTAGACCAGCCAAGCTCACCCCTGCCTCAAGAGATCTCAGTAAATTCTACTCCTTGA | 2922 | 44.01 | MKHIFKKLHIGSNHEPNRSNESPTASVTSPSHAPDQRTSSGQTSANSEASPSSSSPSVATVPAGGNTATPASPASNRPDYISSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGSNRIDTVARDRDEAAEALSRQYWEYNLIDYEEKVMDGFYDVYGISTTIQGKMPSLTDLESSHGSSGYEAVVVNIAIDHALGELVQIAQCIADCPGTEIGVLVQRLAELVTGHMGGPVKDPNIMLSRWMERSTELRTSLHTSILPIGSINIGLLRHRALLFKVLADKIRMPCRLVKGCHYTGIEDDAVNLIKLEDEREYLIDLMAAPGALIPTDILTAKDTSSNPYNPKIIKPPTLHTLNSRISFSKPTSSPDEGSSPSSIAESSFLLDGKQRFGNSELVPSFFSKNGDIGAPPRAPNIGTSGHMDTISSSGIGTSRYKGGRAVNGGVRMNVNVVPYGQNTPEDSKNLFADLKPFQIKGTGKSVVHNKPTDNKVDELQGLRNNPVPGRPPVPQMWKNRQAYNEVPGKKGYDYVGGLVPRIKNEPTDYNTLMSSSSSSTTSEMINSDGFKISGNTKIRGRNIDARNSKSATSSESAPGTSRLSKLPFVEEQNNKSTGEHPENGENMQNEKFNLDGENENIIGFQDRRKNIFMGTSLKLMDSESPSSSVDSNKSRTEQVFDDVDVSECEIHWEDLVIGERIGLGSYGEVYHADWNDTEVAVKKFLDQDFSGAALAEFRREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRIIHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKSWNVKVGDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIFECWQTEPNLRPSFAQLTVALKPLQRLVISSHLDQPSSPLPQEISVNSTP | 973 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 58090753 | 58097180 | + | Conep01aG0179800.1 | Cone1ag1732 | 432423 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 480 | 512 | - | - | |
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 582 | 627 | - | - | |
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Cone1ag1732 | 973 | SUPERFAMILY | Protein kinase-like (PK-like) | 681 | 963 | IPR011009 | - | |
Cone1ag1732 | 973 | FunFam | Serine/threonine-protein kinase isoform 1 | 683 | 770 | - | - | |
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 360 | 381 | - | - | |
Cone1ag1732 | 973 | SMART | serkin_6 | 692 | 947 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 15 | 79 | - | - | |
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 546 | 627 | - | - | |
Cone1ag1732 | 973 | Pfam | Protein tyrosine and serine/threonine kinase | 693 | 942 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | FunFam | PAS domain-containing protein tyrosine kinase family protein | 770 | 958 | - | - | |
Cone1ag1732 | 973 | Gene3D | Phosphorylase Kinase; domain 1 | 685 | 769 | - | - | |
Cone1ag1732 | 973 | ProSiteProfiles | Protein kinase domain profile. | 692 | 951 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 811 | 823 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | CDD | STKc_MAP3K-like | 698 | 941 | - | - | |
Cone1ag1732 | 973 | ProSitePatterns | Protein kinases ATP-binding region signature. | 698 | 720 | IPR017441 | GO:0005524(InterPro) | |
Cone1ag1732 | 973 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 135 | 330 | - | - | |
Cone1ag1732 | 973 | MobiDBLite | consensus disorder prediction | 546 | 570 | - | - | |
Cone1ag1732 | 973 | PRINTS | Tyrosine kinase catalytic domain signature | 915 | 937 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | PRINTS | Tyrosine kinase catalytic domain signature | 871 | 893 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | PRINTS | Tyrosine kinase catalytic domain signature | 805 | 823 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | PRINTS | Tyrosine kinase catalytic domain signature | 852 | 862 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | PRINTS | Tyrosine kinase catalytic domain signature | 766 | 779 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1732 | 973 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 45 | 945 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone1ag1732 | 973 | Gene3D | Transferase(Phosphotransferase) domain 1 | 771 | 953 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag0924 | Cone-Chr17:7256256 | Cone1ag1732 | Cone-Chr1:58090753 | 1.85E-70 | dispersed | |
Cone1ag1732 | Cone-Chr1:58090753 | Cone7ag1292 | Cone-Chr7:9521345 | 5.12E-217 | dispersed | |
Cone1ag1732 | Cone-Chr1:58090753 | Cone5ag0529 | Cone-Chr5:2234623 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82522 | PF04720 | PDDEXK_6 | 1.50E-57 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1732 | - | - | - | 0.0 |