Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1732 ATGAAGCACATTTTCAAGAAGCTTCATATAGGAAGCAACCACGAGCCAAATCGATCAAATGAATCTCCTACTGCTTCTGTTACATCTCCGTCACATGCGCCCGATCAACGTACATCCTCTGGTCAGACCTCCGCCAACTCTGAGGCCAGTCCTTCGTCCTCGTCTCCATCTGTGGCAACCGTTCCTGCAGGTGGAAACACTGCTACGCCAGCTTCTCCGGCTTCAAATCGACCCGATTATATTTCCTCAGAAGAGGAGTTTCAGGTTCAGCTTGCCCTAGCGATCAGTGCCTCGAATTCAGACTTTCGGGACGATCCGGAGAAAGATCAGATTCGAGCTGCGACGCTGCTTAGCTTGGGGAGCAATCGAATAGATACAGTGGCCAGAGATAGAGATGAGGCTGCGGAAGCGTTGTCGAGGCAGTATTGGGAATATAATCTGATAGACTACGAAGAGAAAGTGATGGATGGATTCTATGACGTCTATGGGATTTCCACAACAATCCAAGGAAAAATGCCTAGTCTGACTGATCTTGAATCAAGCCATGGTAGTTCTGGCTATGAAGCTGTAGTTGTTAATATAGCAATTGATCATGCTCTTGGAGAGCTTGTGCAAATTGCTCAGTGCATTGCTGATTGTCCAGGCACTGAGATAGGTGTTTTAGTACAGAGGCTTGCCGAACTTGTAACAGGGCATATGGGTGGACCTGTGAAGGATCCTAATATTATGTTATCAAGGTGGATGGAAAGAAGCACCGAGTTGAGGACATCACTTCACACCAGCATCTTGCCTATTGGGTCTATTAATATTGGCCTCTTACGCCACCGTGCTTTGCTTTTCAAGGTGTTAGCTGACAAAATCAGGATGCCTTGTAGACTGGTAAAAGGTTGTCATTACACTGGCATTGAGGATGATGCTGTCAACCTTATAAAACTGGAGGATGAAAGGGAATATTTGATCGACCTAATGGCAGCCCCAGGAGCTCTTATACCAACTGATATATTAACTGCAAAGGACACCAGCTCTAACCCATACAACCCTAAAATAATTAAGCCGCCGACTCTCCATACCTTAAACAGCAGAATTTCTTTCTCAAAACCAACATCATCACCTGATGAAGGTAGCAGTCCAAGCTCTATAGCGGAAAGTAGTTTTCTGCTGGATGGAAAACAAAGGTTTGGAAATTCAGAACTTGTGCCATCATTCTTTAGTAAAAATGGTGATATTGGTGCTCCTCCTAGAGCACCAAATATAGGAACTTCGGGTCACATGGATACCATTTCCTCGTCAGGCATTGGAACTTCTCGGTACAAAGGGGGCCGTGCAGTTAATGGTGGTGTTAGGATGAATGTCAATGTAGTGCCATATGGCCAAAACACCCCAGAGGATTCTAAAAACCTTTTCGCAGATCTTAAGCCATTCCAGATTAAAGGAACTGGAAAGTCTGTTGTACACAATAAGCCCACGGATAATAAAGTTGATGAGCTTCAGGGACTGAGAAACAACCCTGTCCCTGGTCGACCACCTGTACCACAAATGTGGAAGAATCGACAGGCTTACAATGAAGTTCCTGGGAAAAAAGGGTATGATTATGTGGGGGGCCTTGTTCCAAGAATTAAGAATGAACCTACAGATTATAATACATTGATGTCATCTTCTTCCAGCTCCACCACATCTGAGATGATCAATTCTGATGGTTTTAAAATATCTGGTAATACAAAAATCCGAGGCAGAAATATTGATGCTAGAAACTCAAAATCTGCTACCAGTTCAGAATCGGCACCTGGTACAAGTCGGCTCAGTAAGTTACCTTTTGTTGAGGAACAGAACAATAAATCAACTGGAGAACATCCTGAAAATGGGGAGAACATGCAGAATGAAAAATTTAATTTGGACGGAGAAAATGAAAATATAATTGGGTTCCAAGATCGAAGAAAAAACATATTTATGGGTACTAGTTTAAAATTAATGGATTCGGAAAGTCCCAGCTCATCTGTTGATTCAAATAAGAGTAGGACCGAGCAAGTATTTGATGACGTAGATGTGAGTGAATGTGAAATCCATTGGGAAGATCTGGTTATTGGTGAAAGAATTGGACTAGGTTCCTATGGAGAGGTCTACCATGCTGATTGGAATGACACGGAAGTTGCTGTAAAGAAGTTCTTGGACCAGGACTTTTCAGGTGCTGCTTTAGCCGAGTTCAGAAGAGAAGTAAAAATAATGCGACGTTTGCGTCATCCAAATGTTGTTCTTTTCATGGGTGCTGTTACTCGTCCTCCAAACCTCTCCATCATCACTGAGTTTCTTCCAAGAGGAAGCTTGTATCGGATAATACACCGCCCTCATTGTCAAGTTGATGAGAAGCGGAGAATAAAAATGGCTCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTACACCAACTATTGTCCACCGGGATCTGAAGTCACCAAATCTCTTGGTTGATAAGAGCTGGAATGTGAAGGTAGGTGATTTTGGGTTGTCACGCTTGAAGCACAATACCTTCTTGTCATCAAAATCCACTGGAGGAACGCCTGAGTGGATGGCACCCGAAGTTCTTCGTAATGAACCCTCAAATGAGAAATGTGATGTATATAGCTTTGGAGTCATTCTATGGGAGCTTGCTACTTTGAGGCTACCTTGGAGTGGGATGAACCCGATGCAAGTTGTTGGTGCAGTAGGGTTCCAAAACCGCCGCCTTGAAATCCCGAAAGAAGTTGACCCCTTGGTAGCAAGGATAATTTTTGAATGTTGGCAAACGGAGCCGAATTTACGCCCCTCATTTGCTCAGCTCACGGTAGCACTCAAGCCCTTGCAGCGACTCGTTATTTCCTCACATCTAGACCAGCCAAGCTCACCCCTGCCTCAAGAGATCTCAGTAAATTCTACTCCTTGA 2922 44.01 MKHIFKKLHIGSNHEPNRSNESPTASVTSPSHAPDQRTSSGQTSANSEASPSSSSPSVATVPAGGNTATPASPASNRPDYISSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGSNRIDTVARDRDEAAEALSRQYWEYNLIDYEEKVMDGFYDVYGISTTIQGKMPSLTDLESSHGSSGYEAVVVNIAIDHALGELVQIAQCIADCPGTEIGVLVQRLAELVTGHMGGPVKDPNIMLSRWMERSTELRTSLHTSILPIGSINIGLLRHRALLFKVLADKIRMPCRLVKGCHYTGIEDDAVNLIKLEDEREYLIDLMAAPGALIPTDILTAKDTSSNPYNPKIIKPPTLHTLNSRISFSKPTSSPDEGSSPSSIAESSFLLDGKQRFGNSELVPSFFSKNGDIGAPPRAPNIGTSGHMDTISSSGIGTSRYKGGRAVNGGVRMNVNVVPYGQNTPEDSKNLFADLKPFQIKGTGKSVVHNKPTDNKVDELQGLRNNPVPGRPPVPQMWKNRQAYNEVPGKKGYDYVGGLVPRIKNEPTDYNTLMSSSSSSTTSEMINSDGFKISGNTKIRGRNIDARNSKSATSSESAPGTSRLSKLPFVEEQNNKSTGEHPENGENMQNEKFNLDGENENIIGFQDRRKNIFMGTSLKLMDSESPSSSVDSNKSRTEQVFDDVDVSECEIHWEDLVIGERIGLGSYGEVYHADWNDTEVAVKKFLDQDFSGAALAEFRREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRIIHRPHCQVDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKSWNVKVGDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIFECWQTEPNLRPSFAQLTVALKPLQRLVISSHLDQPSSPLPQEISVNSTP 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 58090753 58097180 + Conep01aG0179800.1 Cone1ag1732 432423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1732 973 MobiDBLite consensus disorder prediction 480 512 - -
Cone1ag1732 973 MobiDBLite consensus disorder prediction 582 627 - -
Cone1ag1732 973 MobiDBLite consensus disorder prediction 1 79 - -
Cone1ag1732 973 SUPERFAMILY Protein kinase-like (PK-like) 681 963 IPR011009 -
Cone1ag1732 973 FunFam Serine/threonine-protein kinase isoform 1 683 770 - -
Cone1ag1732 973 MobiDBLite consensus disorder prediction 360 381 - -
Cone1ag1732 973 SMART serkin_6 692 947 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 MobiDBLite consensus disorder prediction 15 79 - -
Cone1ag1732 973 MobiDBLite consensus disorder prediction 546 627 - -
Cone1ag1732 973 Pfam Protein tyrosine and serine/threonine kinase 693 942 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 FunFam PAS domain-containing protein tyrosine kinase family protein 770 958 - -
Cone1ag1732 973 Gene3D Phosphorylase Kinase; domain 1 685 769 - -
Cone1ag1732 973 ProSiteProfiles Protein kinase domain profile. 692 951 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 CDD STKc_MAP3K-like 698 941 - -
Cone1ag1732 973 ProSitePatterns Protein kinases ATP-binding region signature. 698 720 IPR017441 GO:0005524(InterPro)
Cone1ag1732 973 Pfam Ethylene-responsive protein kinase Le-CTR1 135 330 - -
Cone1ag1732 973 MobiDBLite consensus disorder prediction 546 570 - -
Cone1ag1732 973 PRINTS Tyrosine kinase catalytic domain signature 915 937 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 PRINTS Tyrosine kinase catalytic domain signature 871 893 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 PRINTS Tyrosine kinase catalytic domain signature 805 823 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 PRINTS Tyrosine kinase catalytic domain signature 852 862 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 PRINTS Tyrosine kinase catalytic domain signature 766 779 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag1732 973 PANTHER SERINE-THREONINE PROTEIN KINASE 45 945 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone1ag1732 973 Gene3D Transferase(Phosphotransferase) domain 1 771 953 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0924 Cone-Chr17:7256256 Cone1ag1732 Cone-Chr1:58090753 1.85E-70 dispersed
Cone1ag1732 Cone-Chr1:58090753 Cone7ag1292 Cone-Chr7:9521345 5.12E-217 dispersed
Cone1ag1732 Cone-Chr1:58090753 Cone5ag0529 Cone-Chr5:2234623 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82522 PF04720 PDDEXK_6 1.50E-57 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1732 - - - 0.0