Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag1738 | ATGGGGTGTGTTTTCAGCCGTGAGGCATCCTCAAGAAGTGTAGAAGCTTCTGAGGATAAGACGGGAAATGAGACGGGAAATGAATCTAATAAGAAGGAAGAAAATGGTGTTTTGGAAAATAAGGTTGAGAAGATAGATGGTAATGTGGCCGAAGAGCAAAATGGTGCCTCTCAAGACGAGGAGAAGGCTGATGAGCGCCAGCATGTGGCCCGGGGAGAGAGACGAAAGTCAAAGACACGGCCTAGGCCTAGAAACTTTCCGAAACAATCGAGGGGAGAACAGGTGGCAGCTGGATGGCCTTCTTGGCTAACTGGAGTTTGTGGGGAGGCACTCAATGGTTGGCTTCCAAGGAAAGCGGACACTTTTGAAAAAATCGATAAGATTGGACAAGGAACATATAGTAACGTGTACAAAGCTAAAGATATGCTGACTGGAAAAATTGTCGCACTAAAGAAGGTTCGATTCGACAATTTAGAACCCGAGAGTGTAAGATTCATGGCTAGGGAGATTCTCATTCTGCGGCAATTAGATCATCCTAATGTTGTAAAGTTGGAAGGTTTGGTCACATCAAGGATGTCTTGTAGTTTATACCTTGTCTTTGAGTACATGGAGCATGATTTAGCTGGACTCGCTGCTAACCCAGATATCAAATTCACTGAACCACAGGTCAAGTGTTTTATGCAACAGCTGTTATCTGGGCTAGAACATTGTCACAACTGTAGAGTTCTTCACCGTGATATTAAAGGATCTAATCTTCTCATTGATGGTGGAGGAGTTCTTAAAATTGCTGACTTTGGACTTGCTTCTTTCTTTGATCCGAACCATAAACACCCCATGACTAGCCGTGTAGTTACCTTGTGGTACCGCCCACCAGAGCTTCTTCTTGGGGCTACTGATTATGGTGTGGGTGTAGACCTTTGGAGTGCTGGTTGTATTTTAGCCGAGTTATTAGCCGGCAGACCCATTATGCCTGGCCGTACTGAGGTAGAGCAACTACATAAAATTTACAAGCTTTGTGGGTCCCCCTCGGAAGAATACTGGAAAAGAGCAAAATTACCAAATGCAACCTTATATAAACCAAGGCAGCCTTACAAAAGATGTATAAAAGAGACATTTAAGGATTTCCCGCCATCATCACTGCCTCTTATAGAAACTCTTCTTGCAATTGATCCAGCAGAGCGCAAGACAGCAACAGCCGCATTAAAAAGTGAGTTCTTCACTACAGAACCTTATGCTTGTGAACCTTCTGACCTACCGAAGTATCCTCCAAGCAAGGAGATAGATGCTAAAAGACGGGATGATGAAGCTAGGAAGCTAAGAGCTGCTAATAAAGCACAAGGTGATAGTGTAAAGAAACCTCGGAAAGAACGAGCTGCGAAAGCTGTTCCTGCCCCGGAAGCCAATGCAGAAATACAATCGAACATTGATAGGAGACGCCTTATTACACATGCAAATGCAAAGAGCAAGAGCGAAAAATTCCCTCCACCACACCAAGACGGCGCGGTTGGGTTTCGGTTAGGATTTTCTCGTCATATAGATCCTGCTGCTGTTCCCACAGATGTTCCATTCAGCTCAAGCTCATTCAGCTATTCTCATGATCCGGGTCAAGCATGGTCCGGCCCACTGGTTGAACCGTCTAGTGTCGGCCCAACGAGAAAATCCCGAGAGCCGTCAAAACTATCCAGAAGTGGTGATGCTATGTTAAAAGGAAAGAGAATTATGATTCGTTGA | 1731 | 44.77 | MGCVFSREASSRSVEASEDKTGNETGNESNKKEENGVLENKVEKIDGNVAEEQNGASQDEEKADERQHVARGERRKSKTRPRPRNFPKQSRGEQVAAGWPSWLTGVCGEALNGWLPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVRFMAREILILRQLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPDIKFTEPQVKCFMQQLLSGLEHCHNCRVLHRDIKGSNLLIDGGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSEEYWKRAKLPNATLYKPRQPYKRCIKETFKDFPPSSLPLIETLLAIDPAERKTATAALKSEFFTTEPYACEPSDLPKYPPSKEIDAKRRDDEARKLRAANKAQGDSVKKPRKERAAKAVPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGAVGFRLGFSRHIDPAAVPTDVPFSSSSFSYSHDPGQAWSGPLVEPSSVGPTRKSREPSKLSRSGDAMLKGKRIMIR | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 58138096 | 58141850 | + | Conep01aG0180600.1 | Cone1ag1738 | 432429 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag1738 | 576 | FunFam | probable serine/threonine-protein kinase At1g54610 | 205 | 446 | - | - | |
Cone1ag1738 | 576 | CDD | STKc_CDK9_like | 122 | 406 | - | - | |
Cone1ag1738 | 576 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 204 | - | - | |
Cone1ag1738 | 576 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 446 | - | - | |
Cone1ag1738 | 576 | MobiDBLite | consensus disorder prediction | 414 | 478 | - | - | |
Cone1ag1738 | 576 | Pfam | Protein kinase domain | 122 | 406 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1738 | 576 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
Cone1ag1738 | 576 | MobiDBLite | consensus disorder prediction | 12 | 48 | - | - | |
Cone1ag1738 | 576 | ProSiteProfiles | Protein kinase domain profile. | 122 | 406 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1738 | 576 | MobiDBLite | consensus disorder prediction | 55 | 72 | - | - | |
Cone1ag1738 | 576 | FunFam | probable serine/threonine-protein kinase At1g54610 | 109 | 204 | - | - | |
Cone1ag1738 | 576 | PANTHER | CELL DIVISION PROTEIN KINASE | 121 | 406 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cone1ag1738 | 576 | SMART | serkin_6 | 122 | 406 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag1738 | 576 | ProSitePatterns | Protein kinases ATP-binding region signature. | 128 | 151 | IPR017441 | GO:0005524(InterPro) | |
Cone1ag1738 | 576 | MobiDBLite | consensus disorder prediction | 524 | 576 | - | - | |
Cone1ag1738 | 576 | SUPERFAMILY | Protein kinase-like (PK-like) | 117 | 411 | IPR011009 | - | |
Cone1ag1738 | 576 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 242 | 254 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag1738 | 576 | MobiDBLite | consensus disorder prediction | 421 | 461 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1738 | Cone-Chr1:58138096 | Cone4ag0174 | Cone-Chr4:812123 | 6.50E-290 | dispersed | |
Cone1ag1738 | Cone-Chr1:58138096 | Cone5ag0524 | Cone-Chr5:2209239 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82523 | PF02701 | zf-Dof | 2.70E-32 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag1738 | K08819 | - | csv:101215893 | 873.618 |