Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag1765 | ATGGAAGCAGAAGCAGCGCCGCCGCCTGAACTAGCAGCTGACTGGAAGCACAAACACAACCACCAAAACCATTCACATTATGATCAAATCGAACCCCACCACCATGTTCATGAAGCTCTACATTCCACTTCCATTCTTACAATCACAATCATCTCCATCTCCATTTTCTTGCTCATCTGCATTTTCCTATTCGTATTGATTCTTCAACGGCTCAAATCTGCCAGAAGAAAGAATGCTGCGACCAATTCCAAAGACGGCAATAATCACATCGACAACATCATCAATGCCACCTTCAGTCCTCACTCCAGTACTATGAACTTCAATCCTAGCCCAGAAGTGAAAGGTGGGTGTCTATATGGAGGCAGAGGAGCAGCTCATATTAGATATAAAGGAGTTCAAGTGTTCACATACAAGCAGCTTGAGATCGCTACACAAGCATTTTGTGAAGCAAATTTGATAGGAAATGGAGGGTTTGGAAAGGTCTACAAAGGGGTGCTTCGTGATGGGACCATGGCTGCCATTAAGATGTTGCATCCAAGCCAGGGCAAGCAAAGGGAGCGTGCTTTTCGGGTGGACCTGCTAAGTCGGTTGCAATCCCCTTACTTGGTGGAGTTGCTTGGCTACTGTGCAGACCAAAACCATAGGCTTCTGATTTTTGAGTTCATGCCGCAAGGCACCCTCCAACACCATCTGCATGAAAATGTTAAATCTCAGCCCTTGGGCTGGGGGACCCGGTTGAGGATAGCCCTTGATTGTGCTAGAGCCCTTGAATTCCTCCACGAGTATGCAGTCCCTTCTGTTATCCACCGTAATTTCAAGTGCACCAACGTACTACTGGATCATAACTTCCGGGCCAAGGTTTCGGGTTTCGGGTGGGCAAAGATGGGTTCGGACAAGATCAACGGTCAGGTTTCGACCCGTGTGCTGGGGACCACTGGATATCTAGCACCAGAGTATGGTTCAACAGGGAAGCTAACAACAAAATCAGATGTATACAGCTATGGAGTTGTCCTCCTTGAGCTTTTGACAGGACGTGTACCCGTTGATATCAAGAGACCGCAGGGCGAACATGTACTTGTCTCATGGGCTCTTCCAAGGTTAACTAGTAGAGAAAATTTGATGGAAATGGTTGATCCGGCTATAAAAGGGCAGTACTTAACGAAGGATCTGATTCAGCAATTGCAGCCATGTGTGTGCAGCCAGAATCAGACTACAGGCCTCTAA | 1224 | 47.14 | MEAEAAPPPELAADWKHKHNHQNHSHYDQIEPHHHVHEALHSTSILTITIISISIFLLICIFLFVLILQRLKSARRKNAATNSKDGNNHIDNIINATFSPHSSTMNFNPSPEVKGGCLYGGRGAAHIRYKGVQVFTYKQLEIATQAFCEANLIGNGGFGKVYKGVLRDGTMAAIKMLHPSQGKQRERAFRVDLLSRLQSPYLVELLGYCADQNHRLLIFEFMPQGTLQHHLHENVKSQPLGWGTRLRIALDCARALEFLHEYAVPSVIHRNFKCTNVLLDHNFRAKVSGFGWAKMGSDKINGQVSTRVLGTTGYLAPEYGSTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTSRENLMEMVDPAIKGQYLTKDLIQQLQPCVCSQNQTTGL | 407 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 58262007 | 58264575 | + | Conep01aG0183300.1 | Cone1ag1765 | 432456 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag1765 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 222 | 403 | - | - | |
| Cone1ag1765 | 407 | PANTHER | OS01G0750732 PROTEIN | 25 | 392 | IPR050885 | - | |
| Cone1ag1765 | 407 | ProSitePatterns | Protein kinases ATP-binding region signature. | 153 | 175 | IPR017441 | GO:0005524(InterPro) | |
| Cone1ag1765 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 122 | 221 | - | - | |
| Cone1ag1765 | 407 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 222 | 405 | - | - | |
| Cone1ag1765 | 407 | Pfam | Protein tyrosine and serine/threonine kinase | 152 | 349 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cone1ag1765 | 407 | ProSiteProfiles | Protein kinase domain profile. | 147 | 407 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cone1ag1765 | 407 | SUPERFAMILY | Protein kinase-like (PK-like) | 129 | 399 | IPR011009 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag1765 | Cone-Chr1:58262007 | Cone8ag1529 | Cone-Chr8:11506065 | 2.17E-108 | dispersed | |
| Cone1ag1765 | Cone-Chr1:58262007 | Cone5ag0023 | Cone-Chr5:152332 | 1.04E-230 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 82524 | None | None | None | None | Cone | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag1765 | - | - | - | 0.0 |