Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag1776 ATGACTGCAGTGTTGAGCTATGCTGTGTCAAGATTGCAAATGTTATCCACTTCTGATCATTCCTCTGTGGTTTCCATGAACTTATTTGTAGCACTCCTTTGTGCTTGTATTGTGATTGGTCATCTTCTCGAGGAGAATCGATGGGTTAATGAATCGATCACTGCCCTCTTGATTGGTCTGTGTACTGGAATTGTCATATTGTTGATCAGTGGAGGAAAGAGTTCACACATATTAGTCTTTAGTGAAGATCTTTTCTTTATTTATCTTCTGCCTCCTATTATATTCAATGCTGGGTTTCAGGTGAAGAAGAAGCAGTTTTTTGTTAACTTTATCACAATCATGATGTTTGGCGCCATTGGTACATTGATCTCCTGTTCCATTATATCTCTAGGTGTCAAGCAGTTCTTCAAGAAAATGGATATTGGTTCACTGGAGATTGGAGACTATCTTGCGATTGGGGCAATATTTGCTGCTACAGATTCTGTCTGCACATTGCAGATTCTCAATCAGGATGAGACACCTTTACTCTACAGTCTTGTTTTTGGGGAGGGTGTAGTCAACGATGCTACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTTGATCTCACTAATATCAATCCGAGAACTGCTTTACAGTTTGCTGGAAACTTCTTTTATTTGTTTTTTACAAGTACTATTCTTGGAGTATTTGCTGGGCTGCTCAGTGCTTATATTATTAAAAAGCTTTACATGGGGAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATACTCATGGCATACCTTTCATATATGCTGGCAGAATTATTCTATCTGAGTGGTATTCTCACAGTGTTCTTTTGCGGGATTGTAATGTCTCATTACACCTGGCACAATGTCACGGAGAGTTCAAGAATCACCACCAAGCATGCTTTTGCTACCTTGTCTTTTATTGCTGAGATTTTCATCTTCCTTTATGTTGGTATGGACGCAATGGATATAGAGAAATGGAGATTTGTTAGTGATAGTCCTGGGACATCAGTGGGTGTGAGTTCAATATTGATAGGGCTGGTTATGGCTGGAAGAGCAGCTTTTGTTTTTCCCTTATCATTTTTGTCCAACTTATCCAAAAAGAACCCTGCAGATAAAATCAGCATAAGACAGCAAGTTATAATATGGTGGGCTGGTCTCATGAGAGGCGCTGTCTCAATAGCACTTGCTTACAATCAGTTCACGAGATTAGGGCATACTCAACTGCGAGCTAATGCAATCATGATCACCAGTACCATAACTGTTGTTCTTTTCAGCACAGTGGTGTTCGGATTATTGACCAAGCCTCTTATAAGGTTCTTACGGCCTCAACAAAAACACAGCACCAGCACAATATTATCTGATCCATCAACACCAAAATCATTCATCATTCCTCTTCTCGGACAAGAATCTGAACAGGATCTTGTTCTCCCTGACATCCGCCGGCCAGGCAGCATCCGGGATCTCCTAACGACCCCAACACATACCGTCCATAGGTACTGGCGTAGATTTGACAATGCTTTCATGCGTCCAGTGTTTGGGGGCCGGGGTTTTGTTCCCTTTGTTCCCGGATCACCTACCGAAAGGAGTGCCCATGAAAGAGAATGA 1620 41.67 MTAVLSYAVSRLQMLSTSDHSSVVSMNLFVALLCACIVIGHLLEENRWVNESITALLIGLCTGIVILLISGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAIGTLISCSIISLGVKQFFKKMDIGSLEIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLTNINPRTALQFAGNFFYLFFTSTILGVFAGLLSAYIIKKLYMGRHSTDREVALMILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFIAEIFIFLYVGMDAMDIEKWRFVSDSPGTSVGVSSILIGLVMAGRAAFVFPLSFLSNLSKKNPADKISIRQQVIIWWAGLMRGAVSIALAYNQFTRLGHTQLRANAIMITSTITVVLFSTVVFGLLTKPLIRFLRPQQKHSTSTILSDPSTPKSFIIPLLGQESEQDLVLPDIRRPGSIRDLLTTPTHTVHRYWRRFDNAFMRPVFGGRGFVPFVPGSPTERSAHERE 539
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 58371527 58376855 - Conep01aG0184400.1 Cone1ag1776 432467
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag1776 539 PANTHER SODIUM/HYDROGEN EXCHANGER 15 531 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0090333(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Cone1ag1776 539 Pfam Sodium/hydrogen exchanger family 31 442 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone1ag1776 539 Gene3D - 145 197 - -
Cone1ag1776 539 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone1ag1776 539 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone1ag1776 539 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone1ag1776 539 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone1ag1776 539 NCBIfam sodium/hydrogen exchanger 3 24 462 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0478 Cone-Chr17:2302988 Cone1ag1776 Cone-Chr1:58371527 1.88E-113 dispersed
Cone1ag1776 Cone-Chr1:58371527 Cone7ag0181 Cone-Chr7:761678 3.10E-277 dispersed
Cone10ag0726 Cone-Chr10:3683927 Cone1ag1776 Cone-Chr1:58371527 1.56E-224 transposed
Cone1ag1776 Cone-Chr1:58371527 Cone5ag0001 Cone-Chr5:14717 5.17E-279 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag1776 - - - 0.0