Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0129 ATGGGAGGTGTTTTCGGACAAGCATATTTTGGGAGACGCACGTATTTATATCAAGCACCGAGTCAGCTAAGCTTGATCTTAAACAATGACTCGGGAAAATTCAAGAAAAGATACATAAGGTCGATTGCAGAGCTTGTGGGTGATCAGAGGTTGTTCTGCGCTCTTCCTCACCATCACAAGTTGATTCGTCGCCGTTTGATCAATCTCTTCTCGACTCATTCTCTGTCCTTAATCGTCAAACAGTTCGATCAACTGGTTGTTGATGCGCTAAGTGGATGGCAAAGTAGATCCACTGTCATCATACTTGATGAAGCACTTAAGATAACATGTAGAGCAATGTGCAAGATTCTAACCAGTATAGACAGTGACATGGAATTAAAAGAATTGCAAGCGGATGTTTGTAGTGTTTGTGAAGCCATGCTTGCTTTCACATTCAGGTTTCCTGGGACTAGATTCCATAAAGGCCTTCAGTCAAGAAGAAGAATTATGAACAAACTAGACCAAGTCATAAACGGTGAGATTAAGGATAACAGATGGACTATGATTATTGCCGGTCAGGATACTACAGCCAGTGCTACTACTCGGATGGTTGAATTCTTAGACGAGAACCACCATGTTCTTAACACTCTAAAGGAGGTTGAGGAGGAGTTATTAATGAGTGGTGGATTGGAATCAATGGAGAGTGGGGTGGAAGATGAGGGAGATAATGGGCTGAGAGGCATATTTGGGTCAGTTAGAGAGGGAGATGGATTAGTGGGATAG 762 42.52 MGGVFGQAYFGRRTYLYQAPSQLSLILNNDSGKFKKRYIRSIAELVGDQRLFCALPHHHKLIRRRLINLFSTHSLSLIVKQFDQLVVDALSGWQSRSTVIILDEALKITCRAMCKILTSIDSDMELKELQADVCSVCEAMLAFTFRFPGTRFHKGLQSRRRIMNKLDQVINGEIKDNRWTMIIAGQDTTASATTRMVEFLDENHHVLNTLKEVEEELLMSGGLESMESGVEDEGDNGLRGIFGSVREGDGLVG 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 570871 574020 + Conep20aG0013600.1 Cone20ag0129 460033

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0129 253 PANTHER CYTOCHROME P450 26 7 218 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cone20ag0129 253 SUPERFAMILY Cytochrome P450 2 212 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0129 253 Gene3D Cytochrome P450 1 229 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0129 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1354 Cone-Chr17:9470102 Cone20ag0129 Cone-Chr20:570871 4.57E-103 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g979 . . . . . . . . . Cmo12g00402 . . . Car12g00427 . . Cpe07g00404 Bhi04g00192 . . . Hepe10g0620 . . Cla08g01468 Cam08g1956 Cec08g1531 Cco08g1669 Clacu08g1646 . Cre08g1431 . . Cone17ag1354 Cone20ag0129 . . . Cme03g01934 . Blo18g00807 . Bda01g01502 Bpe02g01700 . Bma01g00754 . . . . Cma12g00452 . . . . . . . . . . . . . . . . . . . Lsi08g01378 Csa02g02073 Chy03g01439 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31