Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0160 | ATGGCGTCAACTTCTTCTCTAGATTTCATTTCTCTGCAACCCCAACTACGCTTCCTATCACAAAAAAAATCATCTACAGCGTCCAAACAAAGCTTCCCTGTCCGTCCGATCTTCGCCTCAATATCTGAAAGGCCTTCTGTACCATCAACCTCTCCGGTGACTGTGCCGCCTCCTGAACCGGAGACCAAGCTACCAATAAGAAAAATCCCCGGGGATTATGGCCTTCCTTTTTTGGGTCCGATCAAAGACAGACTTGACTTTTTCTACGATCAAGGCAGAGATGAGTTCTTCAAATCACGCGTCCAGAAGTATCAATCCACGGTATTTCGAGCTAATCTCCCGCCAGGTCCCTTCATCGCGTCGGATCCTCGCGTCGTCGTTTTACTTGACGGAAAGAGCTTTCCGGTGCTCTTCGACATGAGTAAGGTCGAGAAGAAAGATTTATTTACAGGAACCTTCATGCCGTCGACTGAATTCACCGGCGGTTACCGAGTTCTTTCGTACCTTGATCCATCGGAGCCTAATCACGGCAAGCTGAAACGGCTCATGTTCTTCCTCCTCAAGTCTCGCCGGGACGAGGTCATACCGGAGTTCCATTCCACCTACACGGAGCTATTTGAAACTCTCGAAAGTGAGCTGGCGGCTGAAGGTAAAGCTAACTTCGGCTCAGCGAATGATCAAGCCGCTTTTACGTTCTTGGCGCGCTCTCTATTCGGAACAAACCCGGCGGATACCAAACTTGGTGTAGATGGGCCGGGTCTGGTGGGAAAATGGGTTTTATTTCAGCTCAGTCCACTACTCACTTTGGGCTTCCCAAAGCTTCTAGAAGACCTTCTGATCCACACCTTCCCTCTCCCTCCATTCCTCGTGAAGGCTGATTACCAGAAGCTCTATGATTTCTTCTACGCATCCTCTGGATTTGTTCTAGACGAAGCGGAGAGGTTAGGCATTTCTAGAGATGAAGCTTGTCATAATCTGTTATTCACCACGTGCTTTAATTCATTCGGAGGGATGAAGATCTTCTTCCCTAACATGCTAAAATTGATCGGACGAGCTGGACTCAAGCTCCACACTCAGCTGGCGGAGGAGATCAGAACCGCCGTCAGATCCAACGGCGGTAAAGTCACCATGGGGGGCATGGAGCAGATGCCGTTGATGAAGTCCGTAGTTTACGAAGCGTTACGGATCGAACCTCCCGTTCCGTTACAGTACGGGAAAGCGAAGAGAGACTTCGTTATCGAGAGCCACGACGCGGCGTTTCCGGTGAAGGAAGGCGAGATGATTTTCGGATACCAGCCATTCGCCACTAAGGATCCGAAAATATTCGATAGATCCGAAGAGTTCGTTCCGGATCGGTTCGTCGGCGAGGAGGGAGAGGAGATGCTGAAGTACGTGCTCTGGTCAAACGGACCGGAGTCGGAGACTCCTACCGTTGCGAATAAACAATGCGCCGGGAAAGATTTCGTAGTTCTGGTCTCGAGATTGCTAGTCGTGGAATTGTTCTTGCGGTATGATTCGTTCGAGATCGAAGTCGGATCGTCACCGTTAGGAGCTGCAGTTACTCTCACTTCACTCAAGAGAGGAAGTTTTTGA | 1593 | 49.84 | MASTSSLDFISLQPQLRFLSQKKSSTASKQSFPVRPIFASISERPSVPSTSPVTVPPPEPETKLPIRKIPGDYGLPFLGPIKDRLDFFYDQGRDEFFKSRVQKYQSTVFRANLPPGPFIASDPRVVVLLDGKSFPVLFDMSKVEKKDLFTGTFMPSTEFTGGYRVLSYLDPSEPNHGKLKRLMFFLLKSRRDEVIPEFHSTYTELFETLESELAAEGKANFGSANDQAAFTFLARSLFGTNPADTKLGVDGPGLVGKWVLFQLSPLLTLGFPKLLEDLLIHTFPLPPFLVKADYQKLYDFFYASSGFVLDEAERLGISRDEACHNLLFTTCFNSFGGMKIFFPNMLKLIGRAGLKLHTQLAEEIRTAVRSNGGKVTMGGMEQMPLMKSVVYEALRIEPPVPLQYGKAKRDFVIESHDAAFPVKEGEMIFGYQPFATKDPKIFDRSEEFVPDRFVGEEGEEMLKYVLWSNGPESETPTVANKQCAGKDFVVLVSRLLVVELFLRYDSFEIEVGSSPLGAAVTLTSLKRGSF | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 698999 | 701170 | + | Conep20aG0016800.1 | Cone20ag0160 | 460064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0160 | 530 | PANTHER | CYTOCHROME P450 26 | 68 | 504 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Cone20ag0160 | 530 | Pfam | Cytochrome P450 | 358 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone20ag0160 | 530 | PRINTS | E-class P450 group IV signature | 483 | 501 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone20ag0160 | 530 | PRINTS | E-class P450 group IV signature | 436 | 454 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone20ag0160 | 530 | PRINTS | E-class P450 group IV signature | 383 | 399 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone20ag0160 | 530 | FunFam | Allene oxide synthase, chloroplastic | 64 | 530 | - | - | |
Cone20ag0160 | 530 | MobiDBLite | consensus disorder prediction | 50 | 64 | - | - | |
Cone20ag0160 | 530 | MobiDBLite | consensus disorder prediction | 43 | 65 | - | - | |
Cone20ag0160 | 530 | SUPERFAMILY | Cytochrome P450 | 65 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone20ag0160 | 530 | Gene3D | Cytochrome P450 | 60 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cone20ag0160 | 530 | CDD | CYP74 | 98 | 523 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0160 | Cone-Chr20:698999 | Cone3ag1324 | Cone-Chr3:32186773 | 1.94E-129 | dispersed | |
Cone12ag1126 | Cone-Chr12:9073403 | Cone20ag0160 | Cone-Chr20:698999 | 5.24E-183 | wgd | |
Cone17ag1313 | Cone-Chr17:9317475 | Cone20ag0160 | Cone-Chr20:698999 | 0 | wgd | |
Cone20ag0160 | Cone-Chr20:698999 | Cone4ag1880 | Cone-Chr4:13437908 | 3.77E-295 | wgd | |
Cone20ag0160 | Cone-Chr20:698999 | Cone7ag1789 | Cone-Chr7:11734720 | 1.03E-292 | wgd | |
Cone20ag0160 | Cone-Chr20:698999 | Cone8ag1170 | Cone-Chr8:10108017 | 8.30E-194 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0160 | K01723 | - | mdm:103428639 | 783.097 |