Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0160 ATGGCGTCAACTTCTTCTCTAGATTTCATTTCTCTGCAACCCCAACTACGCTTCCTATCACAAAAAAAATCATCTACAGCGTCCAAACAAAGCTTCCCTGTCCGTCCGATCTTCGCCTCAATATCTGAAAGGCCTTCTGTACCATCAACCTCTCCGGTGACTGTGCCGCCTCCTGAACCGGAGACCAAGCTACCAATAAGAAAAATCCCCGGGGATTATGGCCTTCCTTTTTTGGGTCCGATCAAAGACAGACTTGACTTTTTCTACGATCAAGGCAGAGATGAGTTCTTCAAATCACGCGTCCAGAAGTATCAATCCACGGTATTTCGAGCTAATCTCCCGCCAGGTCCCTTCATCGCGTCGGATCCTCGCGTCGTCGTTTTACTTGACGGAAAGAGCTTTCCGGTGCTCTTCGACATGAGTAAGGTCGAGAAGAAAGATTTATTTACAGGAACCTTCATGCCGTCGACTGAATTCACCGGCGGTTACCGAGTTCTTTCGTACCTTGATCCATCGGAGCCTAATCACGGCAAGCTGAAACGGCTCATGTTCTTCCTCCTCAAGTCTCGCCGGGACGAGGTCATACCGGAGTTCCATTCCACCTACACGGAGCTATTTGAAACTCTCGAAAGTGAGCTGGCGGCTGAAGGTAAAGCTAACTTCGGCTCAGCGAATGATCAAGCCGCTTTTACGTTCTTGGCGCGCTCTCTATTCGGAACAAACCCGGCGGATACCAAACTTGGTGTAGATGGGCCGGGTCTGGTGGGAAAATGGGTTTTATTTCAGCTCAGTCCACTACTCACTTTGGGCTTCCCAAAGCTTCTAGAAGACCTTCTGATCCACACCTTCCCTCTCCCTCCATTCCTCGTGAAGGCTGATTACCAGAAGCTCTATGATTTCTTCTACGCATCCTCTGGATTTGTTCTAGACGAAGCGGAGAGGTTAGGCATTTCTAGAGATGAAGCTTGTCATAATCTGTTATTCACCACGTGCTTTAATTCATTCGGAGGGATGAAGATCTTCTTCCCTAACATGCTAAAATTGATCGGACGAGCTGGACTCAAGCTCCACACTCAGCTGGCGGAGGAGATCAGAACCGCCGTCAGATCCAACGGCGGTAAAGTCACCATGGGGGGCATGGAGCAGATGCCGTTGATGAAGTCCGTAGTTTACGAAGCGTTACGGATCGAACCTCCCGTTCCGTTACAGTACGGGAAAGCGAAGAGAGACTTCGTTATCGAGAGCCACGACGCGGCGTTTCCGGTGAAGGAAGGCGAGATGATTTTCGGATACCAGCCATTCGCCACTAAGGATCCGAAAATATTCGATAGATCCGAAGAGTTCGTTCCGGATCGGTTCGTCGGCGAGGAGGGAGAGGAGATGCTGAAGTACGTGCTCTGGTCAAACGGACCGGAGTCGGAGACTCCTACCGTTGCGAATAAACAATGCGCCGGGAAAGATTTCGTAGTTCTGGTCTCGAGATTGCTAGTCGTGGAATTGTTCTTGCGGTATGATTCGTTCGAGATCGAAGTCGGATCGTCACCGTTAGGAGCTGCAGTTACTCTCACTTCACTCAAGAGAGGAAGTTTTTGA 1593 49.84 MASTSSLDFISLQPQLRFLSQKKSSTASKQSFPVRPIFASISERPSVPSTSPVTVPPPEPETKLPIRKIPGDYGLPFLGPIKDRLDFFYDQGRDEFFKSRVQKYQSTVFRANLPPGPFIASDPRVVVLLDGKSFPVLFDMSKVEKKDLFTGTFMPSTEFTGGYRVLSYLDPSEPNHGKLKRLMFFLLKSRRDEVIPEFHSTYTELFETLESELAAEGKANFGSANDQAAFTFLARSLFGTNPADTKLGVDGPGLVGKWVLFQLSPLLTLGFPKLLEDLLIHTFPLPPFLVKADYQKLYDFFYASSGFVLDEAERLGISRDEACHNLLFTTCFNSFGGMKIFFPNMLKLIGRAGLKLHTQLAEEIRTAVRSNGGKVTMGGMEQMPLMKSVVYEALRIEPPVPLQYGKAKRDFVIESHDAAFPVKEGEMIFGYQPFATKDPKIFDRSEEFVPDRFVGEEGEEMLKYVLWSNGPESETPTVANKQCAGKDFVVLVSRLLVVELFLRYDSFEIEVGSSPLGAAVTLTSLKRGSF 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 698999 701170 + Conep20aG0016800.1 Cone20ag0160 460064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0160 530 PANTHER CYTOCHROME P450 26 68 504 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone20ag0160 530 Pfam Cytochrome P450 358 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0160 530 PRINTS E-class P450 group IV signature 483 501 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0160 530 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0160 530 PRINTS E-class P450 group IV signature 383 399 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0160 530 FunFam Allene oxide synthase, chloroplastic 64 530 - -
Cone20ag0160 530 MobiDBLite consensus disorder prediction 50 64 - -
Cone20ag0160 530 MobiDBLite consensus disorder prediction 43 65 - -
Cone20ag0160 530 SUPERFAMILY Cytochrome P450 65 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0160 530 Gene3D Cytochrome P450 60 530 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0160 530 CDD CYP74 98 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0160 Cone-Chr20:698999 Cone3ag1324 Cone-Chr3:32186773 1.94E-129 dispersed
Cone12ag1126 Cone-Chr12:9073403 Cone20ag0160 Cone-Chr20:698999 5.24E-183 wgd
Cone17ag1313 Cone-Chr17:9317475 Cone20ag0160 Cone-Chr20:698999 0 wgd
Cone20ag0160 Cone-Chr20:698999 Cone4ag1880 Cone-Chr4:13437908 3.77E-295 wgd
Cone20ag0160 Cone-Chr20:698999 Cone7ag1789 Cone-Chr7:11734720 1.03E-292 wgd
Cone20ag0160 Cone-Chr20:698999 Cone8ag1170 Cone-Chr8:10108017 8.30E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0160 K01723 - mdm:103428639 783.097