Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0161 ATGGCCGATTCGGGTTACAATTGCCCGGAAACTGCTAGAGCAATAGCTCATCTACATTCCGCAATTAAACCTCCAATTTTTCATAGAGATATAAAATCAAGCAACATTCTATTAGACTCCAGTTTCAAATCTAAGGTTGCGGATTTCGGTCTATCAAGACTTGGTTTGATCGAAACGTCTCATATGTCTACTGCACCTCAAGGCACGCCTGGATATCTTGACCTACAGTATCACCAAGATTTCCATCTTTCTGATAAGAGCGACGCATATAGTTTCAGCGTAGTTCTTGCAGAGATGTTAACAGGTTTGAAAGCAGTGGACTTTTTCCGTCCAAAAAATGAAGTGAACTTAGCGGCGCTAGCTATAGATAGAATTGGAAACGCCAGTTTGGACAAGATCATAGACCCGAACCTAGACCCCAATGAGGATGCTTGGACTCTTCTGTCGATGCATAAAGAAGCAGAAATAGCATTTCGATGTTTAGCATTTCATAGAGATATGAGCCCTTCTATGATGGAAGTTGCGGCAGAATTAGAAGAGTTGAGGCTAAGTAGATGGACACATTCAATTTCCAGGGCAAAAAATTATGATTCAGAGTTATAA 603 40.8 MADSGYNCPETARAIAHLHSAIKPPIFHRDIKSSNILLDSSFKSKVADFGLSRLGLIETSHMSTAPQGTPGYLDLQYHQDFHLSDKSDAYSFSVVLAEMLTGLKAVDFFRPKNEVNLAALAIDRIGNASLDKIIDPNLDPNEDAWTLLSMHKEAEIAFRCLAFHRDMSPSMMEVAAELEELRLSRWTHSISRAKNYDSEL 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 701412 702014 - Conep20aG0016900.1 Cone20ag0161 460065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0161 200 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone20ag0161 200 Gene3D Transferase(Phosphotransferase) domain 1 8 195 - -
Cone20ag0161 200 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 182 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cone20ag0161 200 Pfam Protein kinase domain 10 107 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone20ag0161 200 SUPERFAMILY Protein kinase-like (PK-like) 10 178 IPR011009 -
Cone20ag0161 200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0161 Cone-Chr20:701412 Cone6ag1365 Cone-Chr6:10938260 7.87E-90 dispersed
Cone17ag1312 Cone-Chr17:9314587 Cone20ag0161 Cone-Chr20:701412 1.53E-112 wgd
Cone20ag0161 Cone-Chr20:701412 Cone4ag1879 Cone-Chr4:13434443 1.75E-87 wgd
Cone20ag0161 Cone-Chr20:701412 Cone7ag1788 Cone-Chr7:11731708 2.57E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82530 PF00590 TP_methylase 3.20E-29 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0161 - - - 0.0