Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0166 | ATGCAGGCCTTTGGCTGCCTTTTCCTTCTCCCTCTTTTGATACTTTTCTCTTCATCCTCTTCATATGCTCTCTCCGATGTCGAAGTTTCTTATATCGCACGCCGCCAGTTATTAAGCTTCGGCGAGAATCATTTAGTAACCCTCAACCCGAATTATCAGAATGTGGAGGATAATAACATAGAAGAGACTTTTGAAAATGAAAGGCTTAAAAGGGCTTACATTGCCCTCCAAGCATGGAAAAAGGCTATTTACTCGGACCCGTTTAACACAACAACTAATTGGGTGGGTACTGATGTGTGTGCGTATACAGGGGTTTTCTGCGCGGAGGCACTTGATGACCCGAAAGTGACCGTTGTTGCCGGAATTGATATTAACCATGCTGACATCGCTGGTTACCTTCCCGTTGAGTTGGGCTTGTTAACCGACATTGCCATGTTTCATATCAATACAAACAGGTTTTGTGGGATCATTCCTACGACTTTCTCGAACCTCAAGCTTCTTTTCGAGCTCGATGTTAGTAATAATAGGTTTGTGGGTCCGTTCCCTACAGTCGTGTTAGAGCTTCCGGCTATTTCGTATCTTGATCTCAGGTTCAACGATTTTGAAGGTTGTTTGCCTGAAGAACTCTTCAACAAGAAAATGGATGCCATCTTCTTGAACAACAATAGGTTCACTTGCTCCATTCCAGAAACTATTGGAAACTCTTCGGTCTCGGTCTTAGTTGTTGCCAATAACCGTTTCAGCGGGTGTATTCCGAGCACAATTGGCAAAATGGCGAACACGTTGAATGAGATTATCTTCGTGAACAATGAATTTGTAGGATGCCTGCCTCAAGAGATCGGCATGCTTGGTAATGTATCGGTGTTTGATATCGGAAATAACAAAATCAGTGGACTCTTGCCTAAGGCATTGAGTGGTCTTAGAAAGGTAGAACAGTTAGATGTCTCGAAGAATATTCTCACAGGATTTGTTACAGAGAGCGTTTGCCAGTTGCCTAAATTGGTGAACTTCACATTTTCTTACAACTTCTTCAACGGGGAAGCTACACAATGTAAGCCATGGTCAAGAAGGGGAGTTCTGTTTGATGATGTAAGCAATTGTTTACCGGATAAACCTAAACAAAAGCCAGAAAAGGAATGTAGTCCGGTTGTTAGCAAGCCAGTCGATTGTGGGAAAGGATTGTGTGGTGGCCGCCCACCGGTTAGTCCTACCCCGAACCCGCATCCTAATCCACCAAAACCACAACCTCCATCACCACCTGTAGAGCACTCTCCGGAGCCAACTCCGGAACACCCTTCACCACCATTTGTACCGTCACCAAAGCACGAGCCTGAGCCTCCGGAACCATCAGTACCATCCCCGTTGGAAGACCCTATAGAACTTTCACCCGTTCCGAAATCATCATATAATGCTCCGACACCTTCACCAACGGATGACCCAATTAAGGTATCACCAACACCTAAGACATCACCGGCTCTGTCGCCACTGCCACCTGTTCATTCCCCACCTCCCCCAGTTCACCCTCTGCCGCCACCACCTCCTATTCAATCGCCACCACCTCCGGTTCCCTCACCCCCACATCCAGTTCAATCCCCACCACCTCCCGTTCAGTCACCCCCACCTCCGGTCCACTCTCCTCCACCATCTCCTGTTCAGCCACCCCCGCCTATGGTACGCTCTCCACCACCTCCTGTGCACTCACCCCCGCCTCCGGTACACTCTCCACCACCACCTCCCGTTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCACCTCCCATTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCACCTCCCATTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCGCCTCCCGTTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCACCTCCTGTTCAATCACCCCCACCACCCCCACCACCAGTTAAGTCTCCACCGCCGCCTCCCGTTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCACCTCCCATTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCACCTCCCATTCAATCACCCCCACCACCAGTTAAGTCTCCACCGCCGCCTCCCGTTCAATCACCCCCACCACCACCTAAGTCTCCACCCCCACCTCCCGTTCAATCACCCCCACCACCAGTTATGTCTCCACCGCCGCCTCCCGTTCAATCACCCCCACCACCTCCCGTTCAGTCACCCCCGCCACCGGTTCGCTCTCCACCTCCTCCTGTTTTCTCACCACCACCTCCTAAGGAAGACATAATCTTGCCACCCAATTTCGGCTCATCGTACATGTCCCCTCCTCCTCCAATATTCGCCGGTTACTAA | 2361 | 50.83 | MQAFGCLFLLPLLILFSSSSSYALSDVEVSYIARRQLLSFGENHLVTLNPNYQNVEDNNIEETFENERLKRAYIALQAWKKAIYSDPFNTTTNWVGTDVCAYTGVFCAEALDDPKVTVVAGIDINHADIAGYLPVELGLLTDIAMFHINTNRFCGIIPTTFSNLKLLFELDVSNNRFVGPFPTVVLELPAISYLDLRFNDFEGCLPEELFNKKMDAIFLNNNRFTCSIPETIGNSSVSVLVVANNRFSGCIPSTIGKMANTLNEIIFVNNEFVGCLPQEIGMLGNVSVFDIGNNKISGLLPKALSGLRKVEQLDVSKNILTGFVTESVCQLPKLVNFTFSYNFFNGEATQCKPWSRRGVLFDDVSNCLPDKPKQKPEKECSPVVSKPVDCGKGLCGGRPPVSPTPNPHPNPPKPQPPSPPVEHSPEPTPEHPSPPFVPSPKHEPEPPEPSVPSPLEDPIELSPVPKSSYNAPTPSPTDDPIKVSPTPKTSPALSPLPPVHSPPPPVHPLPPPPPIQSPPPPVPSPPHPVQSPPPPVQSPPPPVHSPPPSPVQPPPPMVRSPPPPVHSPPPPVHSPPPPPVQSPPPPVKSPPPPPIQSPPPPVKSPPPPPIQSPPPPVKSPPPPPVQSPPPPVKSPPPPPVQSPPPPPPPVKSPPPPPVQSPPPPVKSPPPPPIQSPPPPVKSPPPPPIQSPPPPVKSPPPPPVQSPPPPPKSPPPPPVQSPPPPVMSPPPPPVQSPPPPPVQSPPPPVRSPPPPVFSPPPPKEDIILPPNFGSSYMSPPPPIFAGY | 786 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 717390 | 719880 | + | Conep20aG0017400.1 | Cone20ag0166 | 460070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0166 | 786 | Gene3D | Ribonuclease Inhibitor | 71 | 357 | IPR032675 | - | |
Cone20ag0166 | 786 | PRINTS | Pistil-specific extensin-like signature | 706 | 729 | IPR003882 | - | |
Cone20ag0166 | 786 | PRINTS | Pistil-specific extensin-like signature | 513 | 524 | IPR003882 | - | |
Cone20ag0166 | 786 | PRINTS | Pistil-specific extensin-like signature | 741 | 759 | IPR003882 | - | |
Cone20ag0166 | 786 | MobiDBLite | consensus disorder prediction | 490 | 766 | - | - | |
Cone20ag0166 | 786 | MobiDBLite | consensus disorder prediction | 466 | 489 | - | - | |
Cone20ag0166 | 786 | MobiDBLite | consensus disorder prediction | 400 | 459 | - | - | |
Cone20ag0166 | 786 | SUPERFAMILY | L domain-like | 74 | 350 | - | - | |
Cone20ag0166 | 786 | FunFam | Leucine-rich repeat extensin-like protein 1 | 73 | 234 | - | - | |
Cone20ag0166 | 786 | MobiDBLite | consensus disorder prediction | 395 | 786 | - | - | |
Cone20ag0166 | 786 | Pfam | Leucine rich repeat N-terminal domain | 75 | 107 | IPR013210 | - | |
Cone20ag0166 | 786 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 10 | 611 | IPR051582 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0166 | Cone-Chr20:717390 | Cone5ag1503 | Cone-Chr5:10171994 | 6.30E-47 | dispersed | |
Cone17ag1306 | Cone-Chr17:9298742 | Cone20ag0166 | Cone-Chr20:717390 | 1.80E-112 | wgd | |
Cone20ag0166 | Cone-Chr20:717390 | Cone4ag1548 | Cone-Chr4:11925894 | 5.79E-44 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0166 | - | - | - | 0.0 |