Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0175 ATGCTTCGTCTCTGCTTCAGAACCCGGCGCTCAAATCAGTTACTTCGTTTCCGTCCCTTCACATCCTCATCTTCATCTTCGCCTTCCCCTTCTTTTTCTTCTTCTTCACAGAATCATGTCGAACCTTCTAATAATCTAAAGAACTCCGAAGAATCCCTAGCTCAACCTCTACCAATTTTGCACCGCCACACTCCGAGTCCTCTCTTCCCTATCCATAAAACTACCTCTCTTTCTCGCATGTCGATCTTAGCGCTCTCCGCTACGATCGTCTCGGCTCTTGTAGCCTCTATTTCTCTCTTCTCCTCCTACCGCGATCACGACCCTGAGAACCCCAGCCCTTTGTATGACGGTATCGAACAGGTAATCCACAAATCCAGCGAGCCTTGTAAGAAGCTTTTCCATCACGTCAAGCAAACCGGTATTGCTGCGTCGGTTCTCTGGAAATCGTTGAGTTCGGTTTTGTCCTCGGCAAATCATGAGGTTCGCTCTGGATTTGAGCTTAGGGTTGCAGCCTTGCTCGCCGACATTGCTGCTGCAAATTCTAGTCGGAGAGCAGCGATTGTTGGCGCAGGTGGTGGTGCCGTGGTGGATTGGTTGCTTGAGTCGGTTGCAGTTCCACGAGATGGCGGTGGAACTCAGGCTGAAGCGGCCAGAGCGCTTGCCTACTTGATTGCCGATCCAAATGTGTCTGCGGCTGTTCTTGAGAGGCCTCATGCTGTTCCCAGTCTTCTGAGATTCATTTTCTCCTGTCATCCCCAGAGGTCGAAGAAGCAACCAAGACGTAGTTCACTCGATATTTCTGATTCTTTAAAAGGCCGGAGCATGCTTGTGGCTGCTATTATGGACATTGTCACATCTAGCTGTGACAGATTGGACAGGGTATCTTTTGAGCCATCCTTGCCTGCAAATGCTGAAACTAGGGATATTGCAGCAGCCATTCAAGTTATTGAGGAAGGTAGCTTGCACTTGGATGACTCACATGTAGATGAAGATGGTGACAGTGGAATAGAAGGAATTGGAATGAAAGTTCTTGGAGGTACTACAGTTCTAGGTCTTTCAAGAACCACTGGAAGTATGAAGCTGGCCTATTGTGATGGTAGCCCTGTAGAATCAGTCAGGCAGAACCCCATTACTTTTTTCTCTCAAAATAGGCATGATAGCTCACTTGAGCTAGTCAATATGTCCTCTGCTGTTGTTCCTGGTCTCTGGGATGATTTGCACTGTGAGCATGTCGCTGTACCTTTTGCTTCATGGGCATTAGCAAACTGGGCAATGGCATCAGAGGAGAACAGATCACACATTCAAGAACTAGATCAAGATGGACATGCGGTCATGACTGCTTTAATGGCACGAGAGAGATCTGTGAAATGGCATGCAAGTTTGGTAGCTAAGTTGCTATTAGAGGATCACAATCTACCCTTAAGCGATTCTGTTTCTGATTGGAGTTCTAGTCTTCTCTCCACCATTGCCCAGGCAAGCCAAAATGAAGACATTCCTTTGGCTCAGGTGGCGCTGTCTGCATTTTTGGTTTGTGTTGAAAGGTGCCCCCAGGCACAGAAAACAGTGATGGAGATGGGTCTTCATATGATGAGAGATGCTGCTAGGAGAACACCAAAGCATAAGCAAGTGCAAGAAGCATTGGCAAAGGCATTAGAGTTGCTCTGTTCTGGGGACCTGCATCTATCTCTTGAAGAGAGTCAAAAATGGTCTGGTGTACTGTTTCAGTGGATCTTCGGAAAGTATTCCTCTGAAACTTTGCAATCTTCTGCCAAAAATATTCTAGCTCACATTCTTGATGACCATGGACCATCTTCTATACCAATTTCTCAAGCATGGTTGGCTTTACTTCTGACAGAAATTCTGAGCTCTATCAAGAAATCATCAGTTAAAGGGGGCCCTCCACCCAAAAGCGACAAAGTGAAGACTCAAATTGATCAGTCCAATATTGCTTCTGCTGGTCAAGTAGCTAATCAATTGGCGGGTGCTGTTATTAATCTAGCAAGAACCCAGTTCAGATGTGTACCAGAGTCATTAGATAAATCTCCTCTGGGAGATCTTCTTTCCCTCGAACTTTTTATGGGACCTCTAAAAACTGTAAAGGATAATATTCCTAAGCTTGATGCAGCAGATTCTGCGATGGCAACATTGAAGGGAATCAAAGCGCTGACTGAAGTTTGTGCGGAAGATTCATTGTGTCAGAACAAAATAATTGATTTTGGGGTACTGCACTTGCTAAGATGCTTTTTGTTGTCGGATGATTACGAAAAGCTTGCTGCAATACAAACATACGATGCTTCTAGAACCCTCGAAGCTCAGGAACATGCTTCAAGTCTCCCTGCAGGATCATCCAATTCAAAAACAAACAATCCTGCTAGTATCCGAGTTCCACCTACAGCTCATATCCGTAGGCATGCAGCTCGGCTTTTAACTATCCTTTCACTTCATCCCAAGGTACAGAAGGTTGTTGTTGGAGATAAAGAATTATGTGAATGGCTTGAGGACTGTGCCAGAGGGAAGATACCTGGTTGTAATGACCTTAAATTGCAAAGTTATGCTAGGGCCACACTTTTAAATATATTCTGTAATGAAAAAATTGATGCACATTCTGAGAGTAATGATTCTGATACAGACTCTCCAAACGGGAAGAAGACATGTCCTCGTTATGATGACATGATATTCTTAATCAGTCCTGAGCTTACCCACTGGAAATGTCCTGAGAAAAAGGTTCAGGAAACTCCCAAGGGTGAGAATTCTGTGACAGTGTCTAGTTCTGTTGACAAAGATGGTAGAAGTCCAACAAGGTTGTCAGACAATGGTAACCTTCATAATTTGATTGATGTTCCCCATAATGACTCGCAACCTGAGAATACCCTGCTAGATGTGGTTTTTGTCCATGGGCTCCAGGGTGGGCCTTATAAGTCGTGGCGCATTGCTGAAAGCAGCTCCTCAACCAAATCTGGATTGATAGAGAAGATTGATGAGGAAGCAGGGAAAGAGGGAACATTTTGGCCTGGTGAATGGCTATCTACTGACTTTCCACAAGCTCGCATGTTTACCCTAAAATACAAGACTAATCTCACCCAATGGTCGGGAGCTAGCTTGCCTCTTCAGGAAGTCAGTTCCATGCTATTGGACAAGCTTATTGCTGCAGGCATCGGGGATCGACCTGTTGTATTTGTGACTCACAGCATGGGAGGCCTTGTTGTCAAGCAGATGCTGTATAAAGCTAAGGCAGAAAATATCGGTGCGCTAGTGAACAACACTATTGGAATTGTGTTCTACAGCTGCCCACATTTTGGCAGCAAATTGGCAGATATGCCATTGCGGCTGGGCCTCGTCCTTCGCCCAGCCCCAAGTATAGGGGAGCTAAGGAGTGGGTCTTCAAGATTAGTAGAACTTAATGACTTAATTCGTAACCTTCATAAAAGAGAGCTGCTCGATGTCCTTAGTTATTGTGAGACCAAGGTAACTCCAATTGTTGAAGGTTATGGAGGATGGGCTTTCCGAGTGGAAATCGTACCAATTGAATCAGCATATCCGGGATTTGGTGAACTAGTTGTATTAGAATCAACAGATCACGTAAATTCGTGTAAGCCAGTCAGCCGTGATGATCCTTCATATAAAGAGACATTAGATTTCTTGCGGAAGCTGAAAGCCCTCCATACCTAA 3669 45.05 MLRLCFRTRRSNQLLRFRPFTSSSSSSPSPSFSSSSQNHVEPSNNLKNSEESLAQPLPILHRHTPSPLFPIHKTTSLSRMSILALSATIVSALVASISLFSSYRDHDPENPSPLYDGIEQVIHKSSEPCKKLFHHVKQTGIAASVLWKSLSSVLSSANHEVRSGFELRVAALLADIAAANSSRRAAIVGAGGGAVVDWLLESVAVPRDGGGTQAEAARALAYLIADPNVSAAVLERPHAVPSLLRFIFSCHPQRSKKQPRRSSLDISDSLKGRSMLVAAIMDIVTSSCDRLDRVSFEPSLPANAETRDIAAAIQVIEEGSLHLDDSHVDEDGDSGIEGIGMKVLGGTTVLGLSRTTGSMKLAYCDGSPVESVRQNPITFFSQNRHDSSLELVNMSSAVVPGLWDDLHCEHVAVPFASWALANWAMASEENRSHIQELDQDGHAVMTALMARERSVKWHASLVAKLLLEDHNLPLSDSVSDWSSSLLSTIAQASQNEDIPLAQVALSAFLVCVERCPQAQKTVMEMGLHMMRDAARRTPKHKQVQEALAKALELLCSGDLHLSLEESQKWSGVLFQWIFGKYSSETLQSSAKNILAHILDDHGPSSIPISQAWLALLLTEILSSIKKSSVKGGPPPKSDKVKTQIDQSNIASAGQVANQLAGAVINLARTQFRCVPESLDKSPLGDLLSLELFMGPLKTVKDNIPKLDAADSAMATLKGIKALTEVCAEDSLCQNKIIDFGVLHLLRCFLLSDDYEKLAAIQTYDASRTLEAQEHASSLPAGSSNSKTNNPASIRVPPTAHIRRHAARLLTILSLHPKVQKVVVGDKELCEWLEDCARGKIPGCNDLKLQSYARATLLNIFCNEKIDAHSESNDSDTDSPNGKKTCPRYDDMIFLISPELTHWKCPEKKVQETPKGENSVTVSSSVDKDGRSPTRLSDNGNLHNLIDVPHNDSQPENTLLDVVFVHGLQGGPYKSWRIAESSSSTKSGLIEKIDEEAGKEGTFWPGEWLSTDFPQARMFTLKYKTNLTQWSGASLPLQEVSSMLLDKLIAAGIGDRPVVFVTHSMGGLVVKQMLYKAKAENIGALVNNTIGIVFYSCPHFGSKLADMPLRLGLVLRPAPSIGELRSGSSRLVELNDLIRNLHKRELLDVLSYCETKVTPIVEGYGGWAFRVEIVPIESAYPGFGELVVLESTDHVNSCKPVSRDDPSYKETLDFLRKLKALHT 1222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 762527 768622 - Conep20aG0018300.1 Cone20ag0175 460079

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0175 1222 MobiDBLite consensus disorder prediction 17 48 - -
Cone20ag0175 1222 Gene3D alpha/beta hydrolase 960 1155 IPR029058 -
Cone20ag0175 1222 SUPERFAMILY ARM repeat 149 623 IPR016024 -
Cone20ag0175 1222 MobiDBLite consensus disorder prediction 908 941 - -
Cone20ag0175 1222 Gene3D - 104 290 IPR011989 -
Cone20ag0175 1222 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 1221 - -
Cone20ag0175 1222 MobiDBLite consensus disorder prediction 914 941 - -
Cone20ag0175 1222 Gene3D - 396 877 IPR011989 -
Cone20ag0175 1222 MobiDBLite consensus disorder prediction 774 794 - -
Cone20ag0175 1222 SUPERFAMILY alpha/beta-Hydrolases 959 1153 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0175 K23504 - - csv:101222471 1575.84
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g809 . Blo12g00948 . Bda03g00222 . Bpe04g00189 Bma04g00176 . . . . Cma09g00214 . . . Cpe06g00149 . . . . . . . . . . . . . . . . . . Cone20ag0175 Lsi04g01580 Csa04g02389 . . . . . . . . . . . . Cmo09g00207 . . . Car09g00182 . . Bhi09g03347 . . . . . . Cla05g02022 Cam05g2172 Cec05g2188 Cco05g2236 Clacu05g2165 Cmu05g2033 Cre05g2161 . . Chy07g00115 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005432 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5 2 1 39