Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0225 ATGAAGATCCTACTCAGTTTACTGCAACTTACAGTAGCCCTTGTCCTAATCCTGTTTTGCGATTATGCAGAAGCAGATGATGAGAAGAAAACTTACGTAGTTCACATGGACAAGACCAACATGCCGCAAGAATTCGACGATCACTCTAATTGGTATGACTCTTCTTTGAAATCCGTCTCTAACTCCGCCCAAATGCTTTACACCTACAACACAGTACTCCATGGCTTCTCCACAAGGCTTACAGCCCAGGAGGCCCAGTTGCTCGAAGAGCATCCCGGAGTCCTCTCAGTCCTACCCGAACAGAGATACGAGCTTCACACAACACGTTCACCACAATTCCTTGGACTCGGAAACGTAGAGTCTCTCTTCCCGGATGTATCCGAGAAGGTCGGAGAAGTGACTGTCGGAGTACTGGACACCGGTGTTTGGCCAGAGATCAAGAGCTTCAATGATGAGGGTCTCGGCGCAGTTCCAACAGGCTGGAAAGGCGAATGTGAAGTAGGTAAAACCTTCAACTTGTCGAGCTGCAACAAGAAACTGATCGGGGCTCGGTTTTTCTCGAAAGGGTATGAAGCAACAGTTGGACCGATAGACGAATCGCAAGAATCAAGATCACCTCGCGATGATGACGGGCATGGGACCCACACTTCAACTACAGCTGCGGGATCCGCCGTGCAAGGAGCCAACCTGTTCAGTTTTGCTTCCGGAACGGCGAGAGGGATGGCTAGTAAAGCTCGGATTGCTACTTATAAGGTTTGTTGGCTCGGAGGATGTTTCGGTTCAGACCTTATAGCGGCAATGGATAAAGCTGTTGAGGATGGCGTGAACGTAATTTCCATGTCGATTGGAGGGTCATTACCGAATTATGACAAAGACAACGTTGCGATTGGAGCTTTCTCGGCTATGACTCAAGGAGTGCTTGTTTCTTGCTCGGCCGGAAATGGTGGGCCCGGGCAAGGATCCTTGTCTAATGTTGCTCCTTGGATTACAACCGTAGGGGCCGGGACTTTGGACCGTGATTTTCCAGCTTATGTTAGTCTCGGAAATGAAAAGAACTACACTGGAACATCTCTTTATAGTGGAAAAGAAGCATCTGATTCTTTACTACCAATTGTTTATGCTGGAAATGTAACTAACTCGACAGCTGGGTTTTTATGCCTGACGGGCAGTTTGATTCCTGAGAAAGTTGCCGGGAAAATCGTGGTATGTGACCGAGGGGTGAATTCTCGGGCCCAGAAGGGGTTAGAGGTTAAATCATCAGGTGGGGTTGGAATGATCTTAGCTAACACGGATCTTTATGGAGAAGAGCTAGTAGCCGATGCACATCTTTTGCCATCAGCAGCTGTTGGGCAAAAATCCGGAGACGCGATAAAACAGTATATCTTCTCGGAATCCACACCGTCCGCTAAAATAACATCTGGGGGTACAGAATTGGGCGTGCAACCATCACCTGTAGTAGCAGCATTTAGCTCTAGAGGGCCGAATCCGTTAACTCCGGAAATACTCAAACCGGACCTGATTGCACCTGGAGTGAACATTCTAGCTGGGTGGAGTGAAGCCGTTGGACCGACTGGTTTACCCGGTGATAAGAGGAGGGTGAGCTTAAATATTATTTCTGGTACATCCATGTCTTGTCCACATATAAGCGGGTTAGCTGCCCTGGTGAAGGCGTCTCACCCAGACTGGAGTCCTGCTGCGATTAAGTCCGCTCTTATGACAACATCTTACGAAACGTATAAAAATGGAGAAACTCTTCAAGATGTTGCAAGTGGGAAATCAGCAACGCCGTTTGATTTTGGAGCTGGGCATGTAGATCCTGTTCGTGCCCTCGATCCTGGTCTAGTTTATGACACTAGTGTTGAAGATTATTTCGGGTTTCTATGTGCTCTGAACTATAGTTCTTCTCAGATTAAGCTTGTTACCAGAAAAGACTTTACTTGCGACACAAGCAAGAAGTACAGCGTAGGGGATTTGAATTACCCATCTTTCGGCGTTCCGTTTCAAACGGCTTCAGGGAAAGGAGGGGGACACGGTGGATTAACCACTTTGAAATACACTAGAACTCTGACTAATGTGGGCCCCTCAAGCACATATAAGGTAACACTGTCTTCTCCTCCTCCTTCGGCGGTGAAGATTTCGGTTGAGCCCGAAACACTAAGTTTCGGTAAAGCAGACGAGAAGAAAAGTTATACGGTTACATTTGTTGCTGCTTCCATGCCATCTGGTACAACGAGCTTTGCTCGTTTGGAATGGTCAGATGGGAAACATGTGGTGGGTAGTCCTATTGCTTTCAGCTGGACATGA 2304 47.57 MKILLSLLQLTVALVLILFCDYAEADDEKKTYVVHMDKTNMPQEFDDHSNWYDSSLKSVSNSAQMLYTYNTVLHGFSTRLTAQEAQLLEEHPGVLSVLPEQRYELHTTRSPQFLGLGNVESLFPDVSEKVGEVTVGVLDTGVWPEIKSFNDEGLGAVPTGWKGECEVGKTFNLSSCNKKLIGARFFSKGYEATVGPIDESQESRSPRDDDGHGTHTSTTAAGSAVQGANLFSFASGTARGMASKARIATYKVCWLGGCFGSDLIAAMDKAVEDGVNVISMSIGGSLPNYDKDNVAIGAFSAMTQGVLVSCSAGNGGPGQGSLSNVAPWITTVGAGTLDRDFPAYVSLGNEKNYTGTSLYSGKEASDSLLPIVYAGNVTNSTAGFLCLTGSLIPEKVAGKIVVCDRGVNSRAQKGLEVKSSGGVGMILANTDLYGEELVADAHLLPSAAVGQKSGDAIKQYIFSESTPSAKITSGGTELGVQPSPVVAAFSSRGPNPLTPEILKPDLIAPGVNILAGWSEAVGPTGLPGDKRRVSLNIISGTSMSCPHISGLAALVKASHPDWSPAAIKSALMTTSYETYKNGETLQDVASGKSATPFDFGAGHVDPVRALDPGLVYDTSVEDYFGFLCALNYSSSQIKLVTRKDFTCDTSKKYSVGDLNYPSFGVPFQTASGKGGGHGGLTTLKYTRTLTNVGPSSTYKVTLSSPPPSAVKISVEPETLSFGKADEKKSYTVTFVAASMPSGTTSFARLEWSDGKHVVGSPIAFSWT 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 959052 961810 - Conep20aG0023500.1 Cone20ag0225 460129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0225 767 FunFam Subtilisin-like protease SBT1.9 20 106 - -
Cone20ag0225 767 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Cone20ag0225 767 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cone20ag0225 767 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Cone20ag0225 767 MobiDBLite consensus disorder prediction 196 219 - -
Cone20ag0225 767 ProSiteProfiles Serine proteases, subtilase domain profile. 102 610 - -
Cone20ag0225 767 FunFam Subtilisin-like protease SBT1.5 132 349 - -
Cone20ag0225 767 Pfam PA domain 384 457 IPR003137 -
Cone20ag0225 767 CDD Peptidases_S8_3 103 576 IPR034197 -
Cone20ag0225 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Cone20ag0225 767 CDD PA_subtilisin_like 344 471 - -
Cone20ag0225 767 Pfam Subtilase family 132 601 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone20ag0225 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 762 IPR045051 -
Cone20ag0225 767 Pfam Peptidase inhibitor I9 31 106 IPR010259 -
Cone20ag0225 767 SUPERFAMILY Subtilisin-like 105 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone20ag0225 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Cone20ag0225 767 Gene3D - 627 766 - -
Cone20ag0225 767 FunFam subtilisin-like protease SBT1.5 338 478 - -
Cone20ag0225 767 Pfam Fibronectin type-III domain 657 763 IPR041469 -
Cone20ag0225 767 Gene3D Peptidase S8/S53 domain 133 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone20ag0225 767 Gene3D - 338 478 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0225 Cone-Chr20:959052 Cone4ag0017 Cone-Chr4:97797 1.98E-266 dispersed
Cone17ag0877 Cone-Chr17:6938283 Cone20ag0225 Cone-Chr20:959052 0 wgd
Cone20ag0225 Cone-Chr20:959052 Cone6ag1437 Cone-Chr6:11515594 0 wgd
Cone20ag0225 Cone-Chr20:959052 Cone9ag1364 Cone-Chr9:10213372 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0225 - - - 0.0