Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0246 ATGGCGCCTTCTTTTGATTGGTGGGAGAGGAAGAAGGAGAAGAATAGCCACAGAGGAACTCCAGTCGTCGTGAAAATGGAGAATCCTAACTGGTCCATGGTCGAGCTTTCCCTCCCTTCTGACGAAGAACTTCACACACCGGACACGCCGAGTCGGCTCGGAGATAAATCCCGAGGCAGGAAGAACAACGCTAAGCAGCTCACGTGGGTCCTCTTCCTCAGAGCTCACAAAGCTGCAGGCTGTTTAAGCTCCATTGCCGCCACAATCGCTGGACTGGCCTCCGCCGTAAAACGCCGCCTCGCTTCTTGTCGCACCGACGCCGACATCGATTCCACTACCGTCGCCGGCGGGGGAAGAGAGAAGGAGAATCCCGCCGTGAAGACCAGGTTCTATTCGTTCATCAAGGTGTTCTTATGGGTATCGCTGATTCTGTTAGGGTTTGAGATAGCAGCGTATTGCAAAGGATGGCATTTCGGAGCTCCGAATCTTCAATTGGATCGTATATGGGCGGCCCAATTTGGTGTCAAGGGCGTCTTCGATTGGGCTTACTCTAAATGGATCATGCTTCGGGTCGAATATTTAGCTCCACCACTCCAATTCCTAGCCAATGTGTGTATTATACTCTTCCTGATTCAGAGTGTAGATAGACTTGTTCTTTGCTTGGGCTGTTTCTGGATCAAGTTTAAGAAGATCAAACCGGTCCCGAAAGGAGCTCCCCTTGATATTGAATCTGGCGAAAATGGTTACTTCCCTATGGTCCTTGTTCAGATCCCCATGTGCAACGAAAAAGAGGTTTATCAGCAATCAATTGGTGCTGTATGCAATTTAGACTGGCCGAAATCGAAGATGCTAATACAAGTTCTTGATGATTCAGACGATCCGACAGCTCAGTTACTGATCAAAGAAGAGGTTCGGAAATGGCAGCAAGATGGGGCCAACATAGTGTACAGGCATAGGGTGATTAGAGAAGGGTATAAAGCAGATTTTCTCAAAAAAACAGTCCCTCACTTTCAGGATAACGAGGAGCTAGGATTGGTTCAAGCAAGATGGTCATTTGTGAACAAAGATGAGAACTTGCTAACAAGGCTACAGAATATTAACTTGGCATTCCATTTTGAAGTAGAGCAGCAAGTAAATGGAGTGTACTTGAATTTCTTCGGATTCAATGGAACAGCTGGAGTATGGAGGATTAAGGCCTTAGAAGAGTCTGGTGGGTGGTTGGAGAGGACCACTGTTGAGGATATGGACATTGCAGTCCGGGCCCATCTCCATGGATGGAAGTTCATATTCCTCAATGATGTAGAGTGCCAATGTGAATTGCCAGAATCTTATGAAGCTTACCGGAAACAGCAACATAGATGGCATTCCGGGCCGATGCAGTTGTTTCGCTTTTGTTTACCCGCCATTATTAGAGCTAAGATTAGCATATGGAAGAAACTGAATATGATCTTCCTCTTCTTCCTCCTGAGAAAACTGATCCTCCCCTTCTATTCATTCACCCTCTTCTGCATAATTCTCCCCATGACAATGTTTGTTCCAGAAGCCGAATTACCCGCTTGGGTCGTGTGCTATATCCCTGCCACCATGTCCTTTCTAAATATCCTCCCCGCCCCTAAATCCTTCCCTTTCATTGTTCCCTATCTTCTCTTTGAAAACACAATGTCAGTCACTAAGTTCAATGCCATGGTTTCTGGCCTCTTTCAGCTAGGAAGTGCTTATGAATGGGTTGTGACCAAAAAATCAGGCCGCTCATCTGAGGGCAATCTTGTCTCTTTGGTCGAGAAAGAAGAGCAGAAGCTTCAGAGAGGGGTTTCGGTCCCCAATCTTGGTGAGTTGGAAGAGAAGGTTGTAAATCAGAAGCAGCAAAAGGGTTTGAAGAAAAAGCATAATAGGATATATATGAAGGAGTTGGCTTTGGCTTTTTTGCTTCTGACTGCTGCTACTAGGAGTCTGCTGTCGGCTCAAGGGATCCATTTCTACTTCTTGCTTTTCCAAGGGGTTTCCTTCTTGCTTGTGGGTTTGGATTTGATCGGTGAGCAAGTTGATTGA 2049 46.36 MAPSFDWWERKKEKNSHRGTPVVVKMENPNWSMVELSLPSDEELHTPDTPSRLGDKSRGRKNNAKQLTWVLFLRAHKAAGCLSSIAATIAGLASAVKRRLASCRTDADIDSTTVAGGGREKENPAVKTRFYSFIKVFLWVSLILLGFEIAAYCKGWHFGAPNLQLDRIWAAQFGVKGVFDWAYSKWIMLRVEYLAPPLQFLANVCIILFLIQSVDRLVLCLGCFWIKFKKIKPVPKGAPLDIESGENGYFPMVLVQIPMCNEKEVYQQSIGAVCNLDWPKSKMLIQVLDDSDDPTAQLLIKEEVRKWQQDGANIVYRHRVIREGYKADFLKKTVPHFQDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVYLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRFCLPAIIRAKISIWKKLNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGNLVSLVEKEEQKLQRGVSVPNLGELEEKVVNQKQQKGLKKKHNRIYMKELALAFLLLTAATRSLLSAQGIHFYFLLFQGVSFLLVGLDLIGEQVD 682
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 1089883 1093180 - Conep20aG0025700.1 Cone20ag0246 460150
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0246 682 MobiDBLite consensus disorder prediction 1 21 - -
Cone20ag0246 682 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 495 IPR029044 -
Cone20ag0246 682 MobiDBLite consensus disorder prediction 1 20 - -
Cone20ag0246 682 Pfam Glycosyl transferase family group 2 327 512 IPR001173 -
Cone20ag0246 682 MobiDBLite consensus disorder prediction 41 60 - -
Cone20ag0246 682 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 328 681 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cone20ag0246 682 MobiDBLite consensus disorder prediction 37 60 - -
Cone20ag0246 682 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 244 326 IPR029044 -
Cone20ag0246 682 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 327 439 IPR029044 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0246 Cone-Chr20:1089883 Cone4ag1865 Cone-Chr4:13366518 1.64E-287 dispersed
Cone17ag0903 Cone-Chr17:7115534 Cone20ag0246 Cone-Chr20:1089883 0 wgd
Cone20ag0246 Cone-Chr20:1089883 Cone4ag1635 Cone-Chr4:12361036 0 wgd
Cone20ag0246 Cone-Chr20:1089883 Cone7ag1317 Cone-Chr7:9641464 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0246 - - - 0.0