Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone20ag0292 | ATGGCGATTGACGTGTATGATACAGCTCTGATTCTGTTTTTGGCACTTTCGACTTCCTCGAGCCCGAAGATGAGCCTACGCAGAGGCTCCAAGGTCTGGGTGGAAGGCCGAAGCTCCGCTTGGGTGGCAGCTGAAGTTAACGATTGCAGTGGCAAACTAGTTCAAGTTGTAACTGCTTCCGGGAAAAAGGTTTCGGTATATCCGGAGAAGGTATTTCCGAGAGATGCAGATGAGGAGGATCATGGAGGAGTTGATGACATGACGAAAATGACCTATTTGAATGAGCCAGGGGTGCTGTATAATCTGCAGAGAAGATATGGTCTCAATGACATATATACATACACGGGTAGCATTTTGATTGCGGTTAATCCATTTACCAAGCTCCCTCATCTATACAATGTCCACATGATGGAACAGTACAAAGGAGCCCCTTTTGGTGAACTGAGTCCTCATGTTTTTGCAGTTGCTGATGCATCATATAGAGCAATGATCAGTGAAGGTCAAAGTCAATCTATACTGGTCAGTGGAGAAAGTGGGGCTGGTAAAACTGAGACAACAAAACTTATAATGCAATATCTCACTTATGTTGGTGGTCAGGCTGCCGGAGATGACAGAACAGTAGAGCAGCAGGTTCTTGAATCGAATCCACTCTTGGAGGCATTCGGTAACGCGAGGACTGTTAGAAACGATAATTCAAGTCGTTTTGGAAAGTTTGTTGAGATCCAATTTGATGCAAATGGTAGAATATCTGGCGCTGCAATTAGAACTTACCTTCTGGAAAGGTCTCGTGTAGTTCACATTACAGACCCCGAGAGGAACTATCACTGTTTTTATCAGTTGTGTGCATCTAGGGATGCCGAGAAATACAAGTTAGACCATCCAAGTCATTTCCACTACTTAAATCAAAGCAAGACCTATGAATTAGATGGGATGAACAATGCTGAGGAATATATGAAAACGAGGAGGGCAATGGAAATAGTTGGTTTAAGTTATGAAGATCAGGAAGCTATTTTTTGCACCTTGGCTGCGATTTTGCATTTAGGTAACATCGAGTTTTCTCCTGGAAAGGAGCATGACTCTTCAGTCATAAAGGATAAAAAATCTAGCTTTCATCTACAGATGGCTGCTGAGCTTTTCATGTGTGACGTGAATCTCTTGCTGTCAACACTCTGTACCCGTTCAATCCAAACTCGTGAAGGAAATATTATCAAATCTCTCGACTTTAATGCTGCTGTTGGTAGTCGGGATGCATTGGCAAAGACTGTTTATTCCAGACTGTTTGATTGGCTTGTTGATAAAATTAATAAGTCTGTTGGGCAAGATCCTGACTCCTGTATGCAGATTGGAGTGTTGGATATCTATGGCTTTGAATGCTTTAAGGATAACAGTTTTGAGCAGTTTTGCATCAATTTTGCAAATGAAAAGCTTCAACAACATTTCAATGAGCACGTTTTCAAGATGGAGCAGGAGGAATATAGCAAAGAAGAAATTAATTGGAGCTACATTGAATTTATAGACAACCAGGATGTGTTGGATTTGATCGAAAAGAAACCTATTGGGATAATTGCTCTGTTGGATGAAGCTTGCATGTTCCCAAAATCAACATATGAAACATTTTCAATCAGATTATTTCAGAATTGCCGATCCCATCCGAGGTTGCAGAAAGAAAAATTTTCAGGAACAGATTTTACCATTTCCCATTATGCTGGAAAGGTCACTTATCATACAGATAGCTTCTTAGACAAAAATCGTGATTATGTTGTGGTAGAACACTGTAATCTGTTGTCTTCATCCAAAAGCACCTTTGTGGCTGCTCTTTTCCCTTCCCTGCCCGAAGAATCTTCAAGATCATCATACAAATTTTCTTCGGTGGCAACTAGATTTAAGCAACAACTTCAGGCCCTTATGGAAACTCTCAACTCAACAGAACCTCATTATATACGTTGTGTGAAGCCAAACTCTCTCAATCGTCCTCAGAAGTTTGAAAATCTGAGTGTTCTGCACCAGTTGCGCTGTGGGGGTGTTTTAGAGGCTGTTCGCATAAGTTTGGCTGGTTATCCCACTAGGAGGACTTATTCAGAGTTTATAGATCGCTTTGGACTGCTTGCTCCTGAATTGCTGGATGGAAGTTATGATGAAAAGGCTACAACAGAAAAAGTTCTACAAAAATTGAAGCTCAAGAATTTTCAGTTGGGAAGGACCAAAGTGTTTCTTAGGGCTGGCCAAATTGGCATGCTAGATGCCCGACGAGCTGAAGTATTGGATAATGCTGCAAGGTGTATTCAATGCCGTTTGCGTACATTTTATGCACATAGGGAATTTTTCTCGATCCGCGCATCTTCCGTTGTACTCCAAACATATTGCAGAGGGTACCTTATGCGAAAGACATATGCTGCAAAACAAGAAGCCAGGGCTGCTACTACAGTACAAAAACACATCCGCAGTTGGCTGTTAAGGCGCGCCTATATAAAACTTTATTCAGCTGCACTAATTATACAGTCCAACATTCGAGGTTTCTCGACTCGCCAGAGATTTTGGTATGGAAAGAAGCATAAAGCTGCCACTGTGATTCAGGCTCGATGGAAGACACACAAGGTTCGTGCTGCTTTCCGCCATTACCAAGTGTCTATCATAGCAGTCCAATGCTGTTGGAGGCAAAAGATGGCCAAAAGAGAACTCCGAAGGCTTAAACAAGAAGCTAATGAAACTGGAGCATTGCGTTTGGCTAAGAGTAAACTTGAGAAGCAATTAGAAGATCTCACATGGCGTTTGCATCTTGAGAAAAGATTGCGGATCTCCAATGAAGAGGTCAAGTCGGTTGAAATTTCAAAACTTCAGAAGACAGTGGAATCCTTGAATCTGGAATTAGATGCTGCTAAGTTGGCGACAATTAATGAGTGCAACAAGAATGCAATGCTGCAGAATCAATTGGATTTGTCTGCAAAGGAAAAGCATGCTTTGGAAAGAGAGATTACAGCAATGGCTGGAACGAGGAAAGAAAATGGGTTGCTGAAGAATTCCTTGGATGGCTTAGAGAAAAAGAACTTTAGTCTGGAGCTTGAGCTTATCAAGGCACAAAAGGATCATAAGGACATCATTGAGAAGTTGCGGGAAGTTCAACAGATGTGTGCACAGCTCAAACAGAATATGAAAAGTCTCGAGGACAAAATCTCAATATTAGAGGATGAGAATCATGTTTTGCGACAAAAAGCAATAGCAACTCCTAAGAGTGTCCGTTCTGGTTTTGTGAAGCCATTGACAGAGAAATCTGCTGGAATACTTGCTCTTTCTCAGACAGACCGGAAGTCTGCATTTGAATCACCAACACCCACAAAACTTATTACAACTTTTTCACATGGCCTATCAGAGTCACGTCGAACAAAATTCACAGTAGAGAGGCACCAGGAAAATTATGAATTCCTCTCACTGTGTATCAAAGAAGGTTTGGGTTTTAAAGATGGTAAACCACAGGCGGCTTGTATCATATACCGATGTCTTCTCCACTGGCATGCCTTTGAGTCAGAGAGGACTGTTATCTTTGATTATATAATTGAAGGAATAAATGAGGCTCTGAAGGTTGGAGATGAGAACGTTACCTGCCCATATTGGCTGTCTAATGCCTCAGCTCTGCTATGCCTCCTACAGAGGAATTTACACTCCAATGGATTTCTAACTGCAGCTACTCAGCATTCTACCTTGTCTTCTGGATTAGCGAGCAGGATTGGCCAAGGAATCAAATCACCTCTCAAATTGATTGAATTTGATGACGGTGTCTCACATCTTGAAGCTCGATATCCAGCCATACTGTTCAAACAACAATTAACTGCTTGTGTGGAGAAGATTTTTGGCTTGGTTCGTGATAATTTGAAGAAAGAATTATCTCCACTGTTGGGCTCATGCATTCAGGCCCCCAAAACTGGAAGAGGGATTGCTGGAAAATCCTCTAAGTCACCTGGTGGTATTCCTCAGCAGTCTTCAAATAGCCCGTGGGACAAGATTACCAATTTTCTTGATTCTCATATGAGTCAATTACGAGAAAGTCATGTACCTTCATTCTTCATCCGTAAATTAGTTACTCAAGTGTTCTGTTTCATCAATATATCCCTTTTCAATAGTCTTCTTCTGAGACGGGAATGTTGCTCATTTTCAAATGGAGAATATATAAAATCTGGCCTAGCAGACCTAGAGAAGTGGATTGTCAGTGCAAATGAAGAGTATGCGGGAACCTCATGGCATGAGCTAAATTATATCAGACAAGCTGTTGGGTTTCTGGTTATACATCAGAAGAGAAAGAAATCACTCGAGGAAATAAGACGGGATCTCTGTCAGGCATTGACTATTAGACAAATTTATCGAATTAGTACATTGTATTGCGATGACAAATATGGTTCTCAGAGTGTCTCAAACGAGGTGGTTGCTCAAATGAGGGAGATCTTGAGTAAGGATAATCAGAACTTAACCTCGAATTCATTCTTGCTGGATGATGATCTTAGCATTCCATTCTCAACTGAAGACATAGATATGGAAATCCCTACAATAAACCCTTCAGGAATCGAACTTCCTGGACCACTGTCAGATCATCCCTGTGCCCAATTTCTTGTTCTCCTTCAAAAGTGA | 4617 | 41.39 | MAIDVYDTALILFLALSTSSSPKMSLRRGSKVWVEGRSSAWVAAEVNDCSGKLVQVVTASGKKVSVYPEKVFPRDADEEDHGGVDDMTKMTYLNEPGVLYNLQRRYGLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGQSQSILVSGESGAGKTETTKLIMQYLTYVGGQAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLERSRVVHITDPERNYHCFYQLCASRDAEKYKLDHPSHFHYLNQSKTYELDGMNNAEEYMKTRRAMEIVGLSYEDQEAIFCTLAAILHLGNIEFSPGKEHDSSVIKDKKSSFHLQMAAELFMCDVNLLLSTLCTRSIQTREGNIIKSLDFNAAVGSRDALAKTVYSRLFDWLVDKINKSVGQDPDSCMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTYETFSIRLFQNCRSHPRLQKEKFSGTDFTISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKSTFVAALFPSLPEESSRSSYKFSSVATRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENLSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFIDRFGLLAPELLDGSYDEKATTEKVLQKLKLKNFQLGRTKVFLRAGQIGMLDARRAEVLDNAARCIQCRLRTFYAHREFFSIRASSVVLQTYCRGYLMRKTYAAKQEARAATTVQKHIRSWLLRRAYIKLYSAALIIQSNIRGFSTRQRFWYGKKHKAATVIQARWKTHKVRAAFRHYQVSIIAVQCCWRQKMAKRELRRLKQEANETGALRLAKSKLEKQLEDLTWRLHLEKRLRISNEEVKSVEISKLQKTVESLNLELDAAKLATINECNKNAMLQNQLDLSAKEKHALEREITAMAGTRKENGLLKNSLDGLEKKNFSLELELIKAQKDHKDIIEKLREVQQMCAQLKQNMKSLEDKISILEDENHVLRQKAIATPKSVRSGFVKPLTEKSAGILALSQTDRKSAFESPTPTKLITTFSHGLSESRRTKFTVERHQENYEFLSLCIKEGLGFKDGKPQAACIIYRCLLHWHAFESERTVIFDYIIEGINEALKVGDENVTCPYWLSNASALLCLLQRNLHSNGFLTAATQHSTLSSGLASRIGQGIKSPLKLIEFDDGVSHLEARYPAILFKQQLTACVEKIFGLVRDNLKKELSPLLGSCIQAPKTGRGIAGKSSKSPGGIPQQSSNSPWDKITNFLDSHMSQLRESHVPSFFIRKLVTQVFCFINISLFNSLLLRRECCSFSNGEYIKSGLADLEKWIVSANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRRDLCQALTIRQIYRISTLYCDDKYGSQSVSNEVVAQMREILSKDNQNLTSNSFLLDDDLSIPFSTEDIDMEIPTINPSGIELPGPLSDHPCAQFLVLLQK | 1538 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 1301520 | 1313442 | + | Conep20aG0030500.1 | Cone20ag0292 | 460196 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone20ag0292 | 1538 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 330 | 620 | - | - | |
| Cone20ag0292 | 1538 | SMART | iq_5 | 801 | 823 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | SMART | iq_5 | 824 | 846 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | SMART | iq_5 | 776 | 798 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | SMART | iq_5 | 849 | 871 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | Gene3D | - | 686 | 752 | - | - | |
| Cone20ag0292 | 1538 | Coils | Coil | 942 | 962 | - | - | |
| Cone20ag0292 | 1538 | Pfam | IQ calmodulin-binding motif | 851 | 871 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | Pfam | IQ calmodulin-binding motif | 779 | 797 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | Pfam | IQ calmodulin-binding motif | 827 | 845 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | Pfam | IQ calmodulin-binding motif | 804 | 822 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0292 | 1538 | FunFam | Myosin heavy chain | 272 | 325 | - | - | |
| Cone20ag0292 | 1538 | Pfam | DIL domain | 1357 | 1459 | IPR002710 | - | |
| Cone20ag0292 | 1538 | Gene3D | Kinesin motor domain | 85 | 681 | IPR036961 | - | |
| Cone20ag0292 | 1538 | SMART | MYSc_2a | 76 | 752 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | ProSiteProfiles | Myosin motor domain profile. | 82 | 751 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | Gene3D | - | 272 | 328 | - | - | |
| Cone20ag0292 | 1538 | ProSiteProfiles | IQ motif profile. | 850 | 879 | - | - | |
| Cone20ag0292 | 1538 | ProSiteProfiles | Dilute domain profile. | 1181 | 1481 | IPR002710 | - | |
| Cone20ag0292 | 1538 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 802 | 900 | IPR027417 | - | |
| Cone20ag0292 | 1538 | MobiDBLite | consensus disorder prediction | 1308 | 1328 | - | - | |
| Cone20ag0292 | 1538 | PRINTS | Myosin heavy chain signature | 447 | 475 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | PRINTS | Myosin heavy chain signature | 169 | 194 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | PRINTS | Myosin heavy chain signature | 112 | 131 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | PRINTS | Myosin heavy chain signature | 216 | 243 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | PRINTS | Myosin heavy chain signature | 500 | 528 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | Coils | Coil | 970 | 990 | - | - | |
| Cone20ag0292 | 1538 | Gene3D | - | 457 | 642 | - | - | |
| Cone20ag0292 | 1538 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 52 | 798 | IPR027417 | - | |
| Cone20ag0292 | 1538 | Gene3D | - | 753 | 803 | - | - | |
| Cone20ag0292 | 1538 | Gene3D | - | 850 | 901 | - | - | |
| Cone20ag0292 | 1538 | Gene3D | - | 804 | 849 | - | - | |
| Cone20ag0292 | 1538 | SMART | DIL_2 | 1356 | 1463 | IPR002710 | - | |
| Cone20ag0292 | 1538 | CDD | MYSc_Myo11 | 96 | 739 | IPR036018 | - | |
| Cone20ag0292 | 1538 | ProSiteProfiles | IQ motif profile. | 777 | 806 | - | - | |
| Cone20ag0292 | 1538 | CDD | MyosinXI_CBD | 1132 | 1504 | IPR037975 | GO:0007015(InterPro) | |
| Cone20ag0292 | 1538 | PANTHER | MYOSIN | 32 | 1479 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone20ag0292 | 1538 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 27 | 76 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | ProSiteProfiles | IQ motif profile. | 802 | 828 | - | - | |
| Cone20ag0292 | 1538 | Coils | Coil | 1008 | 1070 | - | - | |
| Cone20ag0292 | 1538 | Pfam | Myosin head (motor domain) | 84 | 739 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0292 | 1538 | ProSiteProfiles | IQ motif profile. | 825 | 854 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag0292 | Cone-Chr20:1301520 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone17ag0949 | Cone-Chr17:7414370 | Cone20ag0292 | Cone-Chr20:1301520 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone20ag0292 | K10357 | - | csv:101210527 | 2440.61 |