Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0309 ATGGAGAAAAAACCAACCTCTTTGCTGTACGATCTTCTCTTTGTTTCCTTCTTCTTCTTCTTCTCTCTTTCTCCTTCTTTTGCTGCTGAATTGTCTTTCAACTTCTATGGAATCACTTGCCCCTCTGCTGAGTTCATGGTCAGAAATACAGTGAGGTCGGCTTCTAACATGGACCCCACAGTGCCCGGAAAGCTCCTTCGGTTGCTCTTCCATGACTGCTTTGTAGAGGGCTGTGATGCTTCTGTCTTGCTACAAGGAAACCGGACAGAGAGAACTGATCCAGGAAACCAGTCACTTGGGGGATTTTCCGTCATTGATTCTGCTAAAAACATGCTCGAGATTTTCTGTCCCAGAACCGTCTCTTGCGCTGACATCATCGCCTTAGCTGCAAGAGATGCAGTTGAATTTGCCGGTGGGCCCGTGGTTCAAATTTTAACCGGTAGGAGAGATGGGAGAGTGTCTTCTGCTTCAAACGTTAGACCCAACATTGTGGATACAAGTTTTACAATGGATGAGATGACAAAGCTCTTTACTTCCAAAGGGCTTACCTTAAATGACCTTGTCACTCTTTCAGGGGCTCACACAATAGGGCTAGCTCATTGCAATGCATTTAGCGATCGATTCAAAGAAGACTCGAGAGGGAAATTCAATCTCATCGACACATCTTTAGATAGAACTTATGCTGATCAGCTAAGCAAACAGTGTCCAGCTCATGCCAATGCATCGATAACTGTCGAGAATGATCCGGTAACTTCCTTCGTGTTCGACAATCAGTATTTCCGAAATCTCGTGGCCCACAAAGGGCTGTTCCAATCAGATTCTGTTCTTTTTAGCGATAACAGGACAAGGAAACAGGTTGAGAATTTTGCAAATGACCAAGCTGGGTTTTTCCGGAGTTGGGCGGATTCATTCTTGAAACTTACTAGGGTAGGAGTGAAAATAGGGGATAAAGGAGAGATTAGGATGTCTTGTTCAGAAAATAATTTATAA 990 44.04 MEKKPTSLLYDLLFVSFFFFFSLSPSFAAELSFNFYGITCPSAEFMVRNTVRSASNMDPTVPGKLLRLLFHDCFVEGCDASVLLQGNRTERTDPGNQSLGGFSVIDSAKNMLEIFCPRTVSCADIIALAARDAVEFAGGPVVQILTGRRDGRVSSASNVRPNIVDTSFTMDEMTKLFTSKGLTLNDLVTLSGAHTIGLAHCNAFSDRFKEDSRGKFNLIDTSLDRTYADQLSKQCPAHANASITVENDPVTSFVFDNQYFRNLVAHKGLFQSDSVLFSDNRTRKQVENFANDQAGFFRSWADSFLKLTRVGVKIGDKGEIRMSCSENNL 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1381179 1382544 - Conep20aG0032200.1 Cone20ag0309 460213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0309 329 PANTHER - 19 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 Pfam Peroxidase 47 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 CDD secretory_peroxidase 30 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone20ag0309 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 ProSiteProfiles Plant heme peroxidase family profile. 30 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 FunFam Peroxidase 164 307 - -
Cone20ag0309 329 Gene3D Peroxidase, domain 2 164 307 - -
Cone20ag0309 329 FunFam Peroxidase 34 176 - -
Cone20ag0309 329 SUPERFAMILY Heme-dependent peroxidases 30 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone20ag0309 329 Gene3D - 34 328 - -
Cone20ag0309 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0309 Cone-Chr20:1381179 Cone4ag1856 Cone-Chr4:13321633 1.07E-79 dispersed
Cone20ag0309 Cone-Chr20:1381179 Cone11ag0046 Cone-Chr11:222204 2.08E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0309 K00430 - mdm:103440557 473.396