Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0318 ATGCAGGCGGATCAGACTGTGATTAGCTTAAGACCAGGAGGCGGTGTTGGTCTTCGTGGAACCAGATTTCTTACCCCTCGCTTCGATCCTTCTTCCTCTGACGCTCCGACTCTCCGTCCCCATGGCGGCATCGCTCCAATCTTCAAGACTGGAGACTTGCGGTTTGAAGGCTGTGAGCGTGTGCAGTACACCCGAGACCAGCTATTACAACTCAGAGAAGTTGCTGTAGTTCCTGAGGATATTTTGAAGATTAAACAAGAAATTGAGGCCGAGTTTGGTGAAGAGGGTCAATCTTGGGGTCATGCAGATGGAAATGTGCAACCTCAATCCCAAAGTCGTTATTCTGAGCCAGACAACCGTGATTGGCGTGGTCGATCTGCACAGCTGCCTACTTCTGGAGAGGAGGGTGACACTTGGGAATCAGGCCGATCTGAGTCAAGACCACAAGAATTGAATAGTCACCAGGAGCAATTAACTGGGCAATTCTCAAGAGCTCAAATTTCTGCTAATCAAGGGGGAGGCCCTGCTCCTGCCCTTGTCAAAGCTGAAGTTCCATGGTCTGCTCGAAGAGGAAATCTCTCTGAGAAGGATCGTGTCTTGAAGACATTGAAAGGTATACTGAATAAGTTGACTCCAGAGAAGTTTGATGTCCTGAAGGGCCAGCTGATTGATTCTGGGATAACGAACCCAGATATTCTTAAGGATGTTATATTGCTGATATTCGAGAAGGCTGTGCTGGAGCCCACATTTTGTCCCATGTATGCTCTCTTATGTTACGACCTTAACGAGAAGCTTCCTCCTTTCCCATCTGATGAGCCCGGGGGAAAATATATCACTTTCAAACGTGTCCTCTTGGATAATTGCCAAGAAGCATTTGAAGGGGCTGACTCTCTTAGGGCAGAAATCCGGCAGATGACTGCTCCTGAGCAGGAAATGGAACGTAGAGATAAAGAAAGAATGGCTAAGCTGCGAACCCTTGGAAATATACGTCTTATTGGTGAACTTCTAAAGCAGAAGATGGTTCCTGAGAAAATAGTTCACCACATTGTTCAGGAGCTTTTGGGTTCTGACAATCAAACATGCCCACCCGAAGATAATGTTGAAGCTATATGTAGATTCTTTAATACCATAGGCAAGCAGCTTGATGAAAACCAAAAAGCCAGGCGAGTCAATGATGTCTACTTCAGCAGGTTGAAGGAGCTGACTTCAAACACTCAACTTGCTCCACGGTACAGGTTTATGGTTCGTGATGTTCTCGAGTTGCGGTCCAACAACTGGGTCCCTAGACGTGAAGAGGTGAAAGCAAAGACTATCACTGAAATCCATTCAGAGGCAGAAAAGAATCTTGGCCTACTTCCAGGATCTACTGCAATGTTAAGAACTGGTCATAGTGCTCTTGGAGGTGGTGGGATAAGTTCAGGAGGTTTTCCGGTCAACAGGCCTGGGGCTGGAGGTATGATGCCCGGAATGCCTGGGGCAAGGAAGATGCCCGGAATGCCAGGGCTTGATTCCGAATGGGAATTTCCTCGAACCAGATCAATGCCAAGGGGTGATGGATCGGGCCCCAACCAATCATCTGCACGGGTCCAACCTCCTTCTATCAACAAACCTACCTCCCTCAATTCAAAATATTTGCCTCAAGGAAGTGGTGGGGTTATAACTGGGAAAACAAGTGCTTTATTGCAGGGTACTGTTGCCCCTCCTGCCCGACCTAGTACTGTCTTGCCCGTAAAAGAACCTGTTGCTACTCCAAACCCCAAATCTGGCCCTACAGCAGCGCCGATATCATCATCACCTCAGAAGCATGCAGGCCCTACAACTAAATCCAATCAAGCTAATCTTCAGAAAAAGACCGTTTCACTTCTAGAAGAATATTTCAGTGTTAGAATTCTTGATGAAGCTCTACAGTGTGTGGAGGAGCTAAAAGCACCGGATTATCATCCAGAAGTTGTTAGAGAAGCTATTAACCTTGCGCTTGAAAAGATCCCACCACATGTGGAACCACTTGCAAAGCTTTTCGACTGCCTGCTTCAGAAAATGGTGTTGACTTCAAGAGATATACAAACAGGGTGCCTTCTTTACGGGTCAATGATAGATGATATTCAAATTGATTTGCCAAAAGCTCCGAGTAATTTCGGTGAGATTCTTGGAAAGTTGGTTTTGGCCCAGGGTTTGGACTTTAAGGTCGTGAAGAAAGTTTTGAAGGAGGTGGAAGATAAGAGTAACCGGATGGCGATTTTGAGTGGGGCTATGAAGAGGATTAAGGATAGTCCTTCCGCAGAAGGTATTTTGGCGACGCAAGGGGTGGATATTCAAGCTTGTGAAAGTTTGCTTGCTTGA 2340 46.54 MQADQTVISLRPGGGVGLRGTRFLTPRFDPSSSDAPTLRPHGGIAPIFKTGDLRFEGCERVQYTRDQLLQLREVAVVPEDILKIKQEIEAEFGEEGQSWGHADGNVQPQSQSRYSEPDNRDWRGRSAQLPTSGEEGDTWESGRSESRPQELNSHQEQLTGQFSRAQISANQGGGPAPALVKAEVPWSARRGNLSEKDRVLKTLKGILNKLTPEKFDVLKGQLIDSGITNPDILKDVILLIFEKAVLEPTFCPMYALLCYDLNEKLPPFPSDEPGGKYITFKRVLLDNCQEAFEGADSLRAEIRQMTAPEQEMERRDKERMAKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSDNQTCPPEDNVEAICRFFNTIGKQLDENQKARRVNDVYFSRLKELTSNTQLAPRYRFMVRDVLELRSNNWVPRREEVKAKTITEIHSEAEKNLGLLPGSTAMLRTGHSALGGGGISSGGFPVNRPGAGGMMPGMPGARKMPGMPGLDSEWEFPRTRSMPRGDGSGPNQSSARVQPPSINKPTSLNSKYLPQGSGGVITGKTSALLQGTVAPPARPSTVLPVKEPVATPNPKSGPTAAPISSSPQKHAGPTTKSNQANLQKKTVSLLEEYFSVRILDEALQCVEELKAPDYHPEVVREAINLALEKIPPHVEPLAKLFDCLLQKMVLTSRDIQTGCLLYGSMIDDIQIDLPKAPSNFGEILGKLVLAQGLDFKVVKKVLKEVEDKSNRMAILSGAMKRIKDSPSAEGILATQGVDIQACESLLA 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1410362 1414655 + Conep20aG0033100.1 Cone20ag0318 460222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0318 779 MobiDBLite consensus disorder prediction 589 612 - -
Cone20ag0318 779 Gene3D - 608 773 - -
Cone20ag0318 779 SUPERFAMILY ARM repeat 193 428 IPR016024 -
Cone20ag0318 779 SMART ma3_7 614 726 IPR003891 -
Cone20ag0318 779 MobiDBLite consensus disorder prediction 566 612 - -
Cone20ag0318 779 MobiDBLite consensus disorder prediction 480 549 - -
Cone20ag0318 779 Gene3D - 191 426 - -
Cone20ag0318 779 MobiDBLite consensus disorder prediction 94 157 - -
Cone20ag0318 779 SUPERFAMILY ARM repeat 610 753 IPR016024 -
Cone20ag0318 779 ProSiteProfiles MI domain profile. 613 735 IPR003891 -
Cone20ag0318 779 MobiDBLite consensus disorder prediction 517 549 - -
Cone20ag0318 779 FunFam Eukaryotic translation initiation factor isoform 4G-2 191 426 - -
Cone20ag0318 779 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 57 777 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Cone20ag0318 779 Pfam MA3 domain 614 726 IPR003891 -
Cone20ag0318 779 Pfam MIF4G domain 201 425 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone20ag0318 779 SMART if4_15 200 425 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0318 Cone-Chr20:1410362 Cone2ag0587 Cone-Chr2:3423742 1.05E-102 dispersed
Cone17ag0976 Cone-Chr17:7547006 Cone20ag0318 Cone-Chr20:1410362 0 wgd
Cone20ag0318 Cone-Chr20:1410362 Cone4ag0588 Cone-Chr4:2701407 3.25e-318 wgd
Cone20ag0318 Cone-Chr20:1410362 Cone7ag0559 Cone-Chr7:2686118 2.58e-315 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0318 K03260 - csv:101211356 1061.6