Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0319 ATGGCTGGTTTATCAAAAGCTCTTCTACCACTCATCATCTTCCTCCTTTTCGGATTCTCAGAAGCTCGAGTATTTCTCGTAGGAGGGAAGAGAGATGCATGGACAATCCCATCATCCTCTTCTCAAGCCGAATCTCTGGATCAATGGGCCCAGAACTCTCGGTTCCGAATAGGCGACATTCTCGTGTGGAATTACGACAGAAACAAGGACTCGGTTCTGCAAGTGACAGAGGAAGGCTATGGAAGCTGCAATACATCAATGGCGATAGAAGAGTACAAGGACGGGAACACAAGGGTTAAGCTGGAAAGGGCAGGGCCTTACTATTTCATAAGTGGGGCAAAGGGTCACTGTGAACAGGGTCAGAAGGTGACTGTAGTTGTGGTTTCTCCAAGACAGAGATTTGTTCTTTCTCCGGCTCCTTCTCCTACGGAGTTTGAAGGTCCGGCCGTTGCTCCAACTAGTGGGGCTGTAAATTTGCAGGCTGGTTTGGTTGTGGGTTTGGGAATTCTTGGGCTAGGGTTCGTTCTTATCATGTGA 537 48.42 MAGLSKALLPLIIFLLFGFSEARVFLVGGKRDAWTIPSSSSQAESLDQWAQNSRFRIGDILVWNYDRNKDSVLQVTEEGYGSCNTSMAIEEYKDGNTRVKLERAGPYYFISGAKGHCEQGQKVTVVVVSPRQRFVLSPAPSPTEFEGPAVAPTSGAVNLQAGLVVGLGILGLGFVLIM 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1416036 1416572 - Conep20aG0033200.1 Cone20ag0319 460223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0319 178 PANTHER BLUE COPPER PROTEIN 17 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cone20ag0319 178 CDD OsENODL1_like 23 127 IPR041846 -
Cone20ag0319 178 Gene3D - 21 131 IPR008972 -
Cone20ag0319 178 ProSiteProfiles Phytocyanin domain profile. 23 129 IPR003245 GO:0009055(InterPro)
Cone20ag0319 178 Pfam Plastocyanin-like domain 34 121 IPR003245 GO:0009055(InterPro)
Cone20ag0319 178 SUPERFAMILY Cupredoxins 22 128 IPR008972 -
Cone20ag0319 178 FunFam Early nodulin-like protein 1 22 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0150 Cone-Chr17:756841 Cone20ag0319 Cone-Chr20:1416036 3.13E-21 dispersed
Cone20ag0319 Cone-Chr20:1416036 Cone6ag0153 Cone-Chr6:768003 6.46E-31 dispersed
Cone17ag0978 Cone-Chr17:7553243 Cone20ag0319 Cone-Chr20:1416036 1.56E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0319 - - - 0.0