Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0363 ATGGAAGAGACATCAAAATACATCGTGGGGTTATTAGCATGTTCTATGATTGTTAATGTTTGGTTGTTGGTTAATTACAAACATGATGTTGGTGAAGAGGGGAAGCTGAGTTGGAGCAGAAGAGCTGCTGAAGAAGCTGAGGGTGTCGCCGCCATTTCATGCTCAGGTCATGGTAGGGCCTACTTGGATGGCTTGCTTCTTCATGATGATGATGCTAATCGACCCGTTTGTGAGTGCAATTCTTGCTATGGAGGCCCTGATTGCTCTCAACTCATTACTCACTGCCTTGTGAATGCTGATGGCGGGGATCCATATTTCTTAGAGCCATTCTGGATGAAGAATGCAGAAAGCAGTGCATTGTTAGTGGCTGGTTGGCATAGAATGGGGTATTCATATAGTGATCAAACTACAATCTCTCAAGAGCTTGACGCCCATATTCGGAAACTACACAGCATTGTAGGAAATGCAATCACTCAAGATAAATACCTTATTTTTGGTTCTGGCTCAACCCAATTGCTTAATGCAGCAGTCCATGCCTTGTCTTCTCCTCATAATTCCACCTCCCCTGCCATGGTTGTGGCCTCAATTCCATTTTACCCGGTCTATGAAAGTCAGACAGAGATGTTCGAGTCGGAGGATTTCAAGTTTGAAGGAGAGGCCTCTTTGGTAATAAACAACGCTACAAGTAGTAGTGGTGAAGAGAAGAGAATAATTGAGTTTGTAACCTCACCTAATAATCCTGATGGCAAGCTGAAGAAATCAGTTCTTTCTGGTGAAAATGCAAAGGCTGTTCATGATCACGCCTATTACTGGCCTCATTATACTCCAATCCCAGCTCCTGCAAATGAAGATGTTATGCTTTTTACCATTTCAAAACTCACTGGTCATGCAGGGACTAGGTTCGGGTGGGCAGTGATAAAGGATAAAGATGTCTATGAGAGAATGGTAACATATATGCAATTGAATACAATAGGGGTCTCTAGAGATGCACAATTGAGAGTTCTAAAGCTTTTGAAAGCAATACTCGAAAATGAAGCAAGGGAAATACTAGAATTTGGATACAAAGCAATGAGCAGCCGGTGGGAAAAACTGAGCAAGACTTTAGCTCAGTCGAAGCGATTTTCTCTCCAAAAAATTGAGCCTATGTATTGCAACTTCATCCAGAGGATTAGAGATCCCTCTCCAGGTGATTCTTTCTAA 1200 42.42 MEETSKYIVGLLACSMIVNVWLLVNYKHDVGEEGKLSWSRRAAEEAEGVAAISCSGHGRAYLDGLLLHDDDANRPVCECNSCYGGPDCSQLITHCLVNADGGDPYFLEPFWMKNAESSALLVAGWHRMGYSYSDQTTISQELDAHIRKLHSIVGNAITQDKYLIFGSGSTQLLNAAVHALSSPHNSTSPAMVVASIPFYPVYESQTEMFESEDFKFEGEASLVINNATSSSGEEKRIIEFVTSPNNPDGKLKKSVLSGENAKAVHDHAYYWPHYTPIPAPANEDVMLFTISKLTGHAGTRFGWAVIKDKDVYERMVTYMQLNTIGVSRDAQLRVLKLLKAILENEAREILEFGYKAMSSRWEKLSKTLAQSKRFSLQKIEPMYCNFIQRIRDPSPGDSF 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1632197 1634366 + Conep20aG0037700.1 Cone20ag0363 460267

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0363 399 Pfam Alliinase EGF-like domain 37 95 IPR006947 GO:0016846(InterPro)
Cone20ag0363 399 Gene3D - 35 138 IPR037029 GO:0016846(InterPro)
Cone20ag0363 399 CDD AAT_like 97 387 - -
Cone20ag0363 399 Pfam Allinase 97 396 IPR006948 GO:0016846(InterPro)
Cone20ag0363 399 Gene3D Aspartate Aminotransferase, domain 1 348 398 IPR015422 -
Cone20ag0363 399 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 102 376 IPR050478 GO:0006520(PANTHER)|GO:0008483(PANTHER)
Cone20ag0363 399 Gene3D - 139 347 IPR015421 -
Cone20ag0363 399 SUPERFAMILY PLP-dependent transferases 37 394 IPR015424 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0363 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0363 Cone-Chr20:1632197 Cone2ag0925 Cone-Chr2:35015047 1.47E-69 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1328 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone20ag0363 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .