Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0384 ATGGCATCCACTCAAATTTCACCTAAAAATGGCAAAGTCACAATGCCCTCAAACACTAGTGACCAGTTCTACCTCGAACAACAACCAGCTCAGCTAGAAATCGATAGCAAGAAGATTTTCGATTACTCGAAACGAGCACAGTGGCTTCGAGCAGCTGTTTTAGGTGCTAATGATGGTCTAGTCTCCACTGCATCTTTAATGGTCGGTGTAGGAGCTGTGAAACAAGACATTAAAGCCATGATACTCACTGGATTTGCTGGTCTAGTGGCCGGAGCTTGTAGCATGGCTATAGGAGAGTACGTGTCTGTCTATTCACAGTTGGATGTTGAGGTAGCTCAGGCGAAGAGAGAGAAGCAAAGTGGGACCGGACGAGGAGAAGAGCTAGAAGATATCAAAGAGAAAGAGAATTTGCCAAACCCTTTGCAAGCTGCTTTTGCTTCGGCTTTCGCTTTTTCAGTGGGAGCAATGGTACCGTTGTTAGCAGCTTCTTTTATAAAGGAGTACAAGGTGAGAGTTGGAGCGGTGGTTTTGACAGTGACTTTGGCTTTGATGATGTTTGGATGGGTGGGTGCTAAGCTCGGAAATGCGCCGGTGATTAGGACCGCGACTAGGGTTTTGGTCGGAGGTTGGTTAGCTATGGCTATTACTTTTGGATTAACCAAATTAATTGGGTCAAGTGGCTTATAA 687 45.56 MASTQISPKNGKVTMPSNTSDQFYLEQQPAQLEIDSKKIFDYSKRAQWLRAAVLGANDGLVSTASLMVGVGAVKQDIKAMILTGFAGLVAGACSMAIGEYVSVYSQLDVEVAQAKREKQSGTGRGEELEDIKEKENLPNPLQAAFASAFAFSVGAMVPLLAASFIKEYKVRVGAVVLTVTLALMMFGWVGAKLGNAPVIRTATRVLVGGWLAMAITFGLTKLIGSSGL 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1797722 1798408 - Conep20aG0039800.1 Cone20ag0384 460288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0384 228 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 225 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cone20ag0384 228 Pfam VIT family 49 122 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone20ag0384 228 Pfam VIT family 127 220 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0384 Cone-Chr20:1797722 Cone8ag0963 Cone-Chr8:9112981 5.40E-78 dispersed
Cone17ag0789 Cone-Chr17:6104243 Cone20ag0384 Cone-Chr20:1797722 5.59E-107 wgd
Cone20ag0384 Cone-Chr20:1797722 Cone4ag1505 Cone-Chr4:11702118 2.02E-94 wgd
Cone20ag0384 Cone-Chr20:1797722 Cone7ag1445 Cone-Chr7:10230273 1.24E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0384 K22736 - vvi:100263270 292.352