Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0385 | ATGGACATAGACCAAATTCCAGAGAATCCACAGCGTGGGTCCAACCACCGTAGGGCCCACTCCGACACCTCGTTCCGATTCTCTAACCTAGACGACCTCCTCCTCTTTGACCCCTCCGACCTTGACCTCTCCTCCCTCCCTTCCCCTTCTCCCACCGCTACACGTGGGCCACCCAAACCCGTTGATTCCTCCAACTCCAGATCCTCTGACGATTCCTCCGGCCCAAATCGCAGGCCCACTGGCTCCGGCCCAATCGGGTCTCACTTCCGGAGCTTGTCTGTAGATTCCGACTTCTTCGACGGCCTCGACCTCTCTGGAGATGGGGCGGAAGCGGACAGATTTGGCGGGAGAATGGCGGTGGGGGATAAGAGGCTGGTTCGTCATAGGCATAGCAATTCCATGGATGGGTCTTATACGTCGTCGTTTGATACTGATTCATTATTGGCCATTGATGGGGCTAAGAAGGCTATGCACCCTGAGAAACTGGCCGAGCTTTCTCTGATTGATCCTAAGAGAGCTAAAAGAATTCTTGCTAATAGACAATCAGCTGCACGGTCAAAGGAGAGGAAAGTACTTTATACAAATGAGCTGGAGAGGAAGGTGCATATGCTTCAGTCAGAAGCAACCACCCTATCTGCACAGGTCACTATTTTACAGAGAGATACCACTGGATTGACTACTGAGAACAGGGAACTCAAACTGCGTTTGCAAGCTATGGAACAGCAAGCCCAACTTAGAGATGCTCTGAATGAGACATTGAAGGATGAAGTGCAACGGCTAAAGATAGCAACAGGACAGAATCCGGTTTCAAACAGGAACCATTTTAACAGAGGGGTACCGCCTCAATTTCATCAGGCATCTGCTGATTCTTGGCCTTCTTCAACTGCAGGAGGGTCCAGTAACATATCTGATAACAACTCTGTTAGTGACAACTTGTATTGGGACATTAGAGGTTGA | 957 | 50.16 | MDIDQIPENPQRGSNHRRAHSDTSFRFSNLDDLLLFDPSDLDLSSLPSPSPTATRGPPKPVDSSNSRSSDDSSGPNRRPTGSGPIGSHFRSLSVDSDFFDGLDLSGDGAEADRFGGRMAVGDKRLVRHRHSNSMDGSYTSSFDTDSLLAIDGAKKAMHPEKLAELSLIDPKRAKRILANRQSAARSKERKVLYTNELERKVHMLQSEATTLSAQVTILQRDTTGLTTENRELKLRLQAMEQQAQLRDALNETLKDEVQRLKIATGQNPVSNRNHFNRGVPPQFHQASADSWPSSTAGGSSNISDNNSVSDNLYWDIRG | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 1803649 | 1807292 | + | Conep20aG0039900.1 | Cone20ag0385 | 460289 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0385 | 318 | MobiDBLite | consensus disorder prediction | 38 | 88 | - | - | |
Cone20ag0385 | 318 | MobiDBLite | consensus disorder prediction | 264 | 280 | - | - | |
Cone20ag0385 | 318 | Pfam | bZIP transcription factor | 171 | 225 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone20ag0385 | 318 | Gene3D | - | 171 | 223 | - | - | |
Cone20ag0385 | 318 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 169 | 232 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone20ag0385 | 318 | SUPERFAMILY | Leucine zipper domain | 171 | 225 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone20ag0385 | 318 | MobiDBLite | consensus disorder prediction | 264 | 304 | - | - | |
Cone20ag0385 | 318 | Coils | Coil | 222 | 242 | - | - | |
Cone20ag0385 | 318 | MobiDBLite | consensus disorder prediction | 57 | 80 | - | - | |
Cone20ag0385 | 318 | Coils | Coil | 194 | 214 | - | - | |
Cone20ag0385 | 318 | SMART | brlzneu | 167 | 231 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone20ag0385 | 318 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 3 | 283 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone20ag0385 | 318 | MobiDBLite | consensus disorder prediction | 286 | 304 | - | - | |
Cone20ag0385 | 318 | CDD | bZIP_plant_RF2 | 172 | 221 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone20ag0385 | 318 | FunFam | probable transcription factor PosF21 | 170 | 223 | - | - | |
Cone20ag0385 | 318 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1197 | Cone-Chr12:9407322 | Cone20ag0385 | Cone-Chr20:1803649 | 3.02E-42 | dispersed | |
Cone17ag1388 | Cone-Chr17:9607920 | Cone20ag0385 | Cone-Chr20:1803649 | 3.77E-39 | dispersed | |
Cone1ag1620 | Cone-Chr1:57637603 | Cone20ag0385 | Cone-Chr20:1803649 | 4.17E-52 | dispersed | |
Cone20ag0093 | Cone-Chr20:425791 | Cone20ag0385 | Cone-Chr20:1803649 | 7.05E-40 | dispersed | |
Cone20ag0385 | Cone-Chr20:1803649 | Cone5ag0141 | Cone-Chr5:607378 | 1.96E-51 | dispersed | |
Cone17ag0790 | Cone-Chr17:6123935 | Cone20ag0385 | Cone-Chr20:1803649 | 3.58E-108 | wgd | |
Cone20ag0385 | Cone-Chr20:1803649 | Cone4ag1506 | Cone-Chr4:11704846 | 1.50E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45586 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0385 | K20557 | - | csv:101207973 | 314.309 |