Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0406 | ATGGTAAGTTCGGGGACACACACTCCAATGGGTGGGCCCCAGTCTGTTTCGCCATCACTTTTGCGGTCGAATTCTGGAATGCTGGGGGTTCAAGGGGGTTCACCTCAGACGAATTTCCCATCACTTGTGTCCCCTCGGACGCCATTTACTAACATAAATATGCTTGGTAACATGGCGAATGTGTCATCCCTACTTAACCAGTCTTTTGGAAATGGAGGTCCAAGTTCTGGGCTCGCAGGCTCTGGTGGAAGCCAGCGTAGTGGAGGGATTGACCCAAATTCCGAGGTGGACCCGCTTTCCGGGGTTAGCAATGGGATGAGCTTCAATAACCCGTCATCGTCATTTGTAGCATCTAACATTGCAAATCCCAGTTTGTCCGGTCAAGGTCAGGGCCCCCAATTTTCAAATCTCGCAAATAGTCAACTACTGTCAGATCATCAGCAGTCTCAACAACCTGAACCTCAGAACTTCCAGCAAGGTCAACAGTCAATACACCAGTTCTCTGGTTCTCAGTCCACCCAACAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAGCAATTTCAAGTCATCCGAGGAGGAGGAGGCTTAGGTGGTCTAGGATCGGTTGTAAAATTGGAGCCTCAATTGACTAGCAATGACCATCAGCAAGGACAGCTTACCCAACAGGCATTGAGGAACCTTGGTCCAGTGAAGTTGGAATCACAGAGACTTCAGTCTAGTAGAACATTAGTTCCTGTCAAAATGGAACCACAACAATCTGATCAATCTGTTTTCTTACATCAACAGCAGCAGCAACAACAACAACATCAACAACAACAACAACAACAACAGCAACAATTTTTTCATATGTCGAGACAACCCTCTCAGGCTGCTGCTGCTCAGATAAGTCTTTTGCATCAGCAAAGATTATTACAGCTACAACAACAGCATCAGCAGCAGCAACAACAGCAGCAGCTCTTCAAGTCAATGCCTCAACAGAGGCCACAATTACAACAGCAGAATGTTCCTCTGAGATCTCTTGGAAAGCCATTGTATGAACCTGGAATGTGTGCTCGGCGTCTGACTCATTACATGCATCGGCAACAACAGAGACCTGAAGACAATGATATTGAGTTCTGGAGGAAGTTTGTTGCTGAGTACTATGCGCCCCATGCCAAAAAGAAGTGGTGTGTATCCATGTATGGAAATGGTCGACACACAACCGGAGTTTTCCCTCAGGATGTCTGGCATTGTGAGATATGCAATCGTAAGCCAGGGCGTGGTTTTGAAGCGACTTTTGAAGTTCTTCCCAGACTATTCAAAATCAAGTACGAAAGTGGTACTCTCGAAGAACTTCTCTATGTTGATATGCCCAGTGAATACCATAACTCGTCAGGTCAGATTGTTCTGGACTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAGCTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTCTCCCAAGATCTAAAGATATGTTCATGGGAATTTTGTGCTCGACGGCATGAAGAGCTTATACCCCGAAGATTATTAATACCTCAGGTTAGTCAGCTAGGGGCAGCAGCTCAAAAGTATCAGACTTCTATTCAAAATGTATCATCCAATTTATCTGCTTCGGAGTTGCAAAATAATTGTAATACGTTTGTAGCATCAGCTCGACAATTGGCTAAAGCTTTGGAGGTTCCATTAGTGAATGATTTAGGATATACAAAGAGATATGTGCGGTGTCTTCAGATATCTGAAGTGGTCAACAGTATGAAAGACTTGATTGATTACAGCCGTGAAACAGGCACTGGACCAATGGAGAGTTTGGCCAAGTTTCCTCGGAGAATAAGACCTTCATCCGGGTTTAACAATCAAGCACAACAGCCGGAGGAACAGTTACTTCAGCAGCAGCAGCAGCAAGCAGTTGTCCCCAATCCAAACATTGACCAAACCTCTGTCCAAACTCCTCCTATGCAACTTGCTACAACCAATGGAGTGACTAATAATCCTGTAAACCCAGCTCCAGCCCCTACCTCGACTTCTGCAAGCACAATTGTTGGTCTACTCCACCAAAACTCAATGAAATCCAGACAGCAAAGTGCAGCCAGTCCCTATGCAGGAGGAAATACGGGGCAGATCTCATCCCCAACCTCTTCTGGCCCAATCCCACAAGCCCAACCCAACAATCCTTCCTCATTCCAAGCCCCAACACCCACATCAGCCAACAATCCTCAAAGTGGTGTATCCCCTGCCAACAACCACATGAGCACAGCAAACTCTTCGGCCAATGTCTCCTTGCTGCAACCGACACTCTCTGGAGATACCGATGCAAGTGATTCCCAAAGCTCCGTCCAGAAAATCTTTCAGGAAATGATGATGTCAAGTCAAATGAATGGCCCGGTTAGTAGTATGGGCGGAGTTGGTCCTATTGGAAATGACGTAAAAAACAATGTCAATGGGATTGTTCGAACAAACAACAATGGTAACTGTCCGGTTGGAAATGGGACGGTGAACAGTAATTCTGGTATTGGAGGTGGTGTTGGTGGATATGGTAATATGAGTATGGTTAATGGGATTAGGTCAAATATGGTAAACAATTCAGTTATGAATGGAAGGATGGGAATAGCGACTTTAGCTCGAGAACAGAGTATGAATCAACATCATCAACAAGATTTGGGAGACCAGCTTCTGAGTGGACTTGGAGCTGTTAATGGCTTTAATAATCTTCAATTCGATTGGAAGTCGTCGCCTTGA | 2754 | 45.35 | MVSSGTHTPMGGPQSVSPSLLRSNSGMLGVQGGSPQTNFPSLVSPRTPFTNINMLGNMANVSSLLNQSFGNGGPSSGLAGSGGSQRSGGIDPNSEVDPLSGVSNGMSFNNPSSSFVASNIANPSLSGQGQGPQFSNLANSQLLSDHQQSQQPEPQNFQQGQQSIHQFSGSQSTQQQQQQQQQQQQQQQFQVIRGGGGLGGLGSVVKLEPQLTSNDHQQGQLTQQALRNLGPVKLESQRLQSSRTLVPVKMEPQQSDQSVFLHQQQQQQQQHQQQQQQQQQQFFHMSRQPSQAAAAQISLLHQQRLLQLQQQHQQQQQQQQLFKSMPQQRPQLQQQNVPLRSLGKPLYEPGMCARRLTHYMHRQQQRPEDNDIEFWRKFVAEYYAPHAKKKWCVSMYGNGRHTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPSEYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSQDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTSIQNVSSNLSASELQNNCNTFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRIRPSSGFNNQAQQPEEQLLQQQQQQAVVPNPNIDQTSVQTPPMQLATTNGVTNNPVNPAPAPTSTSASTIVGLLHQNSMKSRQQSAASPYAGGNTGQISSPTSSGPIPQAQPNNPSSFQAPTPTSANNPQSGVSPANNHMSTANSSANVSLLQPTLSGDTDASDSQSSVQKIFQEMMMSSQMNGPVSSMGGVGPIGNDVKNNVNGIVRTNNNGNCPVGNGTVNSNSGIGGGVGGYGNMSMVNGIRSNMVNNSVMNGRMGIATLAREQSMNQHHQQDLGDQLLSGLGAVNGFNNLQFDWKSSP | 917 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 1971557 | 1979343 | + | Conep20aG0042000.1 | Cone20ag0406 | 460310 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0406 | 917 | Coils | Coil | 261 | 281 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 618 | 681 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 317 | 343 | - | - | |
Cone20ag0406 | 917 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 212 | 909 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 693 | 763 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 616 | 681 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 317 | 340 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 142 | 181 | - | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 72 | 107 | - | - | |
Cone20ag0406 | 917 | Pfam | LIM-domain binding protein | 355 | 609 | IPR029005 | - | |
Cone20ag0406 | 917 | MobiDBLite | consensus disorder prediction | 250 | 288 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1132 | Cone-Chr1:55600990 | Cone20ag0406 | Cone-Chr20:1971557 | 1.23E-107 | dispersed | |
Cone20ag0406 | Cone-Chr20:1971557 | Cone5ag0840 | Cone-Chr5:3596482 | 2.37E-106 | dispersed | |
Cone17ag0802 | Cone-Chr17:6346743 | Cone20ag0406 | Cone-Chr20:1971557 | 0 | wgd | |
Cone20ag0406 | Cone-Chr20:1971557 | Cone4ag1452 | Cone-Chr4:11511786 | 9.00E-256 | wgd | |
Cone20ag0406 | Cone-Chr20:1971557 | Cone7ag1480 | Cone-Chr7:10392817 | 2.38E-235 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0406 | - | - | - | 0.0 |