Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0441 ATGGATTTGAAAGCTCAAGTAATTGCAGAACAAGAAGAAGCCGAGGAAATGAAGCAACAGCAGCCGCAGCATTTCCATGTGTTAGCAGTCGATGATAACATGATAGAAAGAAAGGTCTTAGAGAGACTCCTCAGAATTTCCTCTTACAAGGTGACCTGTGTAGAATCTGGGGATAAAGCTCTGAAATATTTGGGTCTACTTGATGATCATCACCAAAACGACGTCACTTCCTCTTCTTCCTCATATTCTTCTCCTAAGCTACCACAACATGATCAGGAATTAAAGGTCAATTTAATCATGACGGACTACTGTATGCCCGGGATGAGCGGCTATGATTTACTCAAGCGAATTAAGGGATCTTCATGGAAAGATGTACCAGTTGTTGTCATGTCTTCAGAGAACATACCATCAAGAATAAACATGTGTTTGGAAGGAGGTGCAGAGGAGTTCCTTCTGAAGCCGGTTCAGTTGTCGGATTTGAAAAAGCTTAAGCCATACCTTGACCACCAGTCTTGTTCTTGTACAGGAATCAAAGAGGAAGAAGATCGACAGGAATTAACGGTTGAGATTAATAACGATACTAGTAATACTGTTAGTGAGAATAATAATATCGTTAAAAATAATAACAATAATAATGTTAGCAAGAGGAAGGCGGTTTCTGCTGAGGCTTCAGACAGAATATCAAAAATGAAAGAGATGGCTGTAGTCTAA 711 39.66 MDLKAQVIAEQEEAEEMKQQQPQHFHVLAVDDNMIERKVLERLLRISSYKVTCVESGDKALKYLGLLDDHHQNDVTSSSSSYSSPKLPQHDQELKVNLIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVVMSSENIPSRINMCLEGGAEEFLLKPVQLSDLKKLKPYLDHQSCSCTGIKEEEDRQELTVEINNDTSNTVSENNNIVKNNNNNNVSKRKAVSAEASDRISKMKEMAVV 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2226763 2228613 - Conep20aG0045600.1 Cone20ag0441 460345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0441 236 SUPERFAMILY CheY-like 24 162 IPR011006 -
Cone20ag0441 236 Pfam Response regulator receiver domain 91 162 IPR001789 GO:0000160(InterPro)
Cone20ag0441 236 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 218 IPR045279 GO:0009736(InterPro)
Cone20ag0441 236 Gene3D - 26 234 - -
Cone20ag0441 236 ProSiteProfiles Response regulatory domain profile. 26 168 IPR001789 GO:0000160(InterPro)
Cone20ag0441 236 SMART REC_2 25 164 IPR001789 GO:0000160(InterPro)
Cone20ag0441 236 CDD REC_typeA_ARR 27 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0441 Cone-Chr20:2226763 Cone7ag0062 Cone-Chr7:273575 1.58E-50 dispersed
Cone17ag1286 Cone-Chr17:9221135 Cone20ag0441 Cone-Chr20:2226763 2.08E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45592 PF06925 MGDG_synth 2.80E-59 CL0113 Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0441 K14492 - gmx:100801334 242.276