Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0453 ATGGCAAACGCCGATCTTGAAGTTCTCAGTGTCTTGGACAAAGCCAAGACGCAGATGTACCACTTTCTTACTGTGGTTATAGCCGGATCAGGATTCTTCACGGATTCCTACGATCTATTCTGCATCTCTCTAGTCACGAAGCTTCTCGGCAGAATCTACTACCATGTTCCGGGTTCTTCCAAGCCGGGAAGCTTACCGCCTAACGTTGCTGCTGCTGTTAATGGGGTTGCTCTCTGTGGAACCTTTGCTGGACAGCTTTTCTTTGGAAGGCTTGGTGATAAGCTTGGAAGAAAACGTGTCTATGGAATCACTCTCTTGCTCATGGTTATTTGCTCGATCGGCTCCGGTCTATCTTTCAGTTACTCGCCTCAATCTGTTATGGCCACCCTCTGCTTTTTTAGGTTTTGGTTAGGGTTTGGGATTGGTGGTGACTACCCACTATCTGCAACGATCATGGCTGAATATTCCAACAAGAAAACTCGTGGGAGTTTCATTGCTGCCGTCTTCGCCATGCAAGGATTTGGTATCTTAGCTGGCGGCACCGTCGCAATTGTAATCGCATCGATCTTCATGTATTTTTTCCCCGCACCCTCTTATGCCGTTAATGCAATGGCCTCTACCGTACCACAAGCCGACTATGTATGGCGGATTATTCTCATGTTTGGTGCTCTACCTGCTGCTTTGACCTACTATTGGCGTATGAAGATGCCGGAAACCGCCCGTTATACCGCCTTAGTTGCCAAGGATGGCAAGAAAGCTTCTCAAGATATGGCAAAGGTGTTAAATGTCGATATTGATCAAGGAACTAATGGGCAACAAGTCGCAGCAGAGATTCAAGAGAATAGAGGAAGAAACTCTTTTAAGTTGTTCTCTAAGAAGTTTATGCAAAACCATGGGCGTCACCTTATCGGAACAACAGTGACCTGGTTTCTGCTTGATATTGCTTACTACAGCCAGAATCTCTTCCAGAAGGACATTTTCAGTGCCGTCGGATGGCTGCCCGCTCCTAAGACAATGAGTGCTTTACAGGAGCTTTACATGATTGCTAGGGCACAAACCCTAATTGCACTTTGTGGAACTGTTCCTGGTTATTGGGTTACGGTTTTCACCATTGATCATTTGGGGAGATTTACGATTCAACTTGTCGGGTTCTTATTCATGACAATATCCATGTTGGGACTAGCAATTCCCTACCATCACTGGACCTTGAAGGAAAACAAGATTGGTTTTGTGGCATTGTATGCATTGACTTTCTTCTTTGCCAACTTTGGACCTAATAGCACTACATTTGTTATTCCGGCCGAAATTTTCCCAGCAAGGTTTCGGTCAACTTGCCACGGAATTTCAGCAGCTTCGGGAAAGATCGGGGCAATAATTGGAGCATTTGGTTTCTTGTATGCTGCTCAAAGTCAAGATAAGAATAAGACTGATGCCGGTTACCATCCCGGAATTGGAGTTAGGAATTCTCTTCTAGTACTAGCTGGAATTAGTCTCCTTGGATTATTATTTACTTTTCTGGTGCCGGAAACGAAGGGGAAATCTTTGGAAGAGATGTCAAAGGAGAATCTTGGAGAAGAAGAAGAGAAGAATGGAAGTCTCAAATCAGTCGAGATCGTTTAG 1620 44.88 MANADLEVLSVLDKAKTQMYHFLTVVIAGSGFFTDSYDLFCISLVTKLLGRIYYHVPGSSKPGSLPPNVAAAVNGVALCGTFAGQLFFGRLGDKLGRKRVYGITLLLMVICSIGSGLSFSYSPQSVMATLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGSFIAAVFAMQGFGILAGGTVAIVIASIFMYFFPAPSYAVNAMASTVPQADYVWRIILMFGALPAALTYYWRMKMPETARYTALVAKDGKKASQDMAKVLNVDIDQGTNGQQVAAEIQENRGRNSFKLFSKKFMQNHGRHLIGTTVTWFLLDIAYYSQNLFQKDIFSAVGWLPAPKTMSALQELYMIARAQTLIALCGTVPGYWVTVFTIDHLGRFTIQLVGFLFMTISMLGLAIPYHHWTLKENKIGFVALYALTFFFANFGPNSTTFVIPAEIFPARFRSTCHGISAASGKIGAIIGAFGFLYAAQSQDKNKTDAGYHPGIGVRNSLLVLAGISLLGLLFTFLVPETKGKSLEEMSKENLGEEEEKNGSLKSVEIV 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2323048 2324800 - Conep20aG0046800.1 Cone20ag0453 460357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0453 539 Gene3D MFS general substrate transporter like domains 21 536 IPR036259 -
Cone20ag0453 539 NCBIfam phosphate:H+ symporter 12 521 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone20ag0453 539 MobiDBLite consensus disorder prediction 517 539 - -
Cone20ag0453 539 Pfam Sugar (and other) transporter 25 520 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone20ag0453 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 12 517 - -
Cone20ag0453 539 FunFam Inorganic phosphate transporter 1-6 20 533 - -
Cone20ag0453 539 SUPERFAMILY MFS general substrate transporter 12 521 IPR036259 -
Cone20ag0453 539 CDD MFS_PhT 25 511 - -
Cone20ag0453 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 512 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0948 Cone-Chr12:8223413 Cone20ag0453 Cone-Chr20:2323048 7.38E-69 dispersed
Cone12ag0949 Cone-Chr12:8223864 Cone20ag0453 Cone-Chr20:2323048 5.28E-64 dispersed
Cone20ag0453 Cone-Chr20:2323048 Cone4ag0326 Cone-Chr4:1480205 1.31E-283 dispersed
Cone12ag0947 Cone-Chr12:8222927 Cone20ag0453 Cone-Chr20:2323048 1.99E-52 transposed
Cone20ag0982 Cone-Chr20:6961827 Cone20ag0453 Cone-Chr20:2323048 3.98E-59 transposed
Cone17ag1273 Cone-Chr17:9167568 Cone20ag0453 Cone-Chr20:2323048 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0453 K08176 - vvi:100257925 761.14