Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0470 ATGGAAACAGAAACCACTTCCAGTGCGGAAAACGGAGGCTCTGCTCCTGCTCCTAGCGACAGAGTAACCGATATGGACACTGATCAAAGAGACATCGAGCGGGAGAACCTACCGGAGTCCGACTCGACGACGATGAAGCGGCGTTCCGGTATTCTTCTTGAGGTAGGTACCCGTGTCCTCTGCCGTTGGAGGGACGGAAAGTACCATCCTGTTAAGGTTATTGAGCGCCGCAAATTGACCTCTGGTTATCCCGTTGATTACGAGTATTACGTGCATTACACTGAGTTCAATAGGAGGCTCGATGAATGGGTGAAGCTTGACCAGCTTGATCTTGATTCAGTTGAGTCTGTTATCGATGAGAAAGTGGAGGACAAGGTAACTAGCTTAAAAATGACACGCCACCAGAAGCGGAAGATTGACGAAACTCATGTTGAGGGCCATGAGGAACTTGATGCTGCCAGCTTACGGGAGCATGAAGAGTTCACGAAAGTGAAAAATATAGCAACTATAGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCTTTTCCGCCAGAATACAATGACTGTGTGAAACTCTACTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTTCAAAGGCACATGAAGAAGTGTGATCTGAAGCATCCACCTGGTGATGAGATTTACAGAAGTGGTACACTGTCCATGTTTGAGGTTGATGGGAAAAAGAACAAGGTTTATGGGCAGAATCTCTGTTATTTGGCAAAGTTGTTTCTTGATCATAAAACTCTATACTACGATGTCGACCTTTTTCTATTTTATATTCTCTGCGAGTGTGATGATCGAGGATGCCACATGGTTGGATATTTTTCCAAGGAAAAGCATTCAGAAGAATCCTATAACTTGGCCTGCATTCTCACCCTTCCTCCTTATCAACGAAAAGGCTACGGAAAGTTCTTAATCGCCTTCTCATATGAACTGTCAAAGAAAGAAAGCAAGGTGGGCACACCAGAAAGACCCCTTTCCGACCTCGGATTAGTGAGCTACAGAGGATATTGGACTCGGGTTCTTCTAGACATCTTGAAAAGACACAAAGGCAATATCTCAATCAAGGAACTTAGTGACATGACAGCAATTAAGGCAGAAGATATACTAAACACACTTCAAAGCCTAGAGTTGATTCAATACAGAAAAGGGCAGCACGTAATCTGTGCAGACCCTAAAGTTTTGGACCGTCATCTGAAAGCTGCTGGTCGTGGTGGTCTCGAGGTTGACGCTTCTAAATTGATCTGGACTCCTTATAAGGAACAAGGGTAA 1317 44.19 METETTSSAENGGSAPAPSDRVTDMDTDQRDIERENLPESDSTTMKRRSGILLEVGTRVLCRWRDGKYHPVKVIERRKLTSGYPVDYEYYVHYTEFNRRLDEWVKLDQLDLDSVESVIDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKESKVGTPERPLSDLGLVSYRGYWTRVLLDILKRHKGNISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDASKLIWTPYKEQG 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2477098 2480493 + Conep20aG0048500.1 Cone20ag0470 460374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0470 438 Gene3D - 341 421 IPR036388 -
Cone20ag0470 438 MobiDBLite consensus disorder prediction 23 42 - -
Cone20ag0470 438 FunFam Histone acetyltransferase 161 218 - -
Cone20ag0470 438 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 162 433 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cone20ag0470 438 Gene3D - 221 433 - -
Cone20ag0470 438 Gene3D - 163 219 - -
Cone20ag0470 438 PANTHER HISTONE ACETYLTRANSFERASE 54 435 IPR050603 GO:0000790(PANTHER)|GO:0003712(PANTHER)|GO:0045892(PANTHER)|GO:0045944(PANTHER)
Cone20ag0470 438 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 163 434 IPR016181 -
Cone20ag0470 438 CDD NAT_SF 274 330 - -
Cone20ag0470 438 SUPERFAMILY Chromo domain-like 47 163 IPR016197 -
Cone20ag0470 438 Gene3D - 41 162 - -
Cone20ag0470 438 SMART chromo_7 67 126 IPR000953 -
Cone20ag0470 438 FunFam Histone acetyltransferase 221 348 - -
Cone20ag0470 438 FunFam Histone acetyltransferase 341 420 - -
Cone20ag0470 438 Pfam MYST family zinc finger domain 164 218 IPR040706 -
Cone20ag0470 438 MobiDBLite consensus disorder prediction 1 45 - -
Cone20ag0470 438 CDD CBD_MOF_like 56 125 - -
Cone20ag0470 438 Pfam MOZ/SAS family 223 400 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cone20ag0470 438 Pfam RNA binding activity-knot of a chromodomain 53 111 IPR025995 -
Cone20ag0470 438 FunFam Histone acetyltransferase 43 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1257 Cone-Chr17:9051917 Cone20ag0470 Cone-Chr20:2477098 0 wgd
Cone20ag0470 Cone-Chr20:2477098 Cone4ag1369 Cone-Chr4:11120228 2.19E-270 wgd
Cone20ag0470 Cone-Chr20:2477098 Cone7ag1562 Cone-Chr7:10733882 4.15E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0470 K11308 - mdm:103410217 791.571