Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0507 ATGGAGGATTATCATGTAGCTAAGTTTCTTAATACTCAAGGACATGAATTAGGACTCTTTGCGCTCTTTGATGGTCACTTGGGCCATCAAGTTCCGGCCTACTTACAAAAACATCTGTTTTCCAACATCCTGAAAGAGAATGAGTTCTGGGTGGACCCCAAAAGTTCTATCTCTAATGCATACGAGAAGACAGACAAAGCAATTATCTCCGGTAGCAATGACCTCGGGCGAGGCGGGTCCACTGCTGTAACTGCCATTCTGATCAACGGACAGAGATTATTGGTAGCCAATCTGGGAGATTCCCGGGCAGTTCTTTCCAGAGGAGGTCAAGCCGTGCAGATGACTACTGACCATGAGCCCCATACTGAACGACGAACCATCGAGAAAAAAGGCGGCTTTGTTTCAAACATGCCAGGTGATGTGCCTAGAGTTAATGGACAGCTTGCGGTCTCTCGGGCTTTTGGGGACGAGGGCCTTAAAACTCATTTAAGGTCAGACCCGGACATACAAGATGCCACCATTGATATCAATACTGATGTGCTAATTCTTGCAAGTGATGGCCTTTGGAAGGTGATGGAAAATCAAGAGGCAGTTGATATTGCAAGAAGGGTCAAGGATCCATTGAAGGCTGCTAAGTGTTTAACAGCTGAAGCTTTGAAGAGGGAGAGTAGAGATGACATTTCTTGCATTGTTGTCAGATTTGGATGA 708 45.76 MEDYHVAKFLNTQGHELGLFALFDGHLGHQVPAYLQKHLFSNILKENEFWVDPKSSISNAYEKTDKAIISGSNDLGRGGSTAVTAILINGQRLLVANLGDSRAVLSRGGQAVQMTTDHEPHTERRTIEKKGGFVSNMPGDVPRVNGQLAVSRAFGDEGLKTHLRSDPDIQDATIDINTDVLILASDGLWKVMENQEAVDIARRVKDPLKAAKCLTAEALKRESRDDISCIVVRFG 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 2741321 2743111 + Conep20aG0052200.1 Cone20ag0507 460411
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0507 235 ProSiteProfiles PPM-type phosphatase domain profile. 1 234 IPR001932 -
Cone20ag0507 235 Pfam Protein phosphatase 2C 1 227 IPR001932 -
Cone20ag0507 235 SUPERFAMILY PP2C-like 1 235 IPR036457 -
Cone20ag0507 235 FunFam Probable protein phosphatase 2C 39 1 235 - -
Cone20ag0507 235 Gene3D - 1 235 IPR036457 -
Cone20ag0507 235 SMART PP2C_SIG_2 3 234 IPR001932 -
Cone20ag0507 235 SMART PP2C_4 1 232 IPR001932 -
Cone20ag0507 235 CDD PP2Cc 1 234 IPR001932 -
Cone20ag0507 235 PANTHER PROTEIN PHOSPHATASE 1 232 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0507 Cone-Chr20:2741321 Cone3ag1093 Cone-Chr3:29567925 1.12E-124 dispersed
Cone17ag1218 Cone-Chr17:8842993 Cone20ag0507 Cone-Chr20:2741321 2.18E-152 wgd
Cone20ag0507 Cone-Chr20:2741321 Cone4ag1335 Cone-Chr4:10921634 8.43E-129 wgd
Cone20ag0507 Cone-Chr20:2741321 Cone7ag1594 Cone-Chr7:10900747 7.36E-132 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0507 K17506 - mdm:114821525 395.201