Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0521 ATGGCGGCCTCACCATCTCCTCGAGAAGAGAACGTGTACATGGCCAAGCTTGCCGAGCAAGCCGAGCGCTACGAAGAGATGGTCGAGTTTATGGAGAAGGTCTCGGCCTCCGTCGACAACGAGGAGCTAACTGTGGAGGAGAGAAACCTCCTCTCTGTCGCCTACAAGAACGTGATCGGAGCACGGAGAGCCTCGTGGCGTATCATCTCCTCCATCGAGCAGAAAGAGGAGAGCCGAGGCAACGAGGACCACGTCTCTGTGATTCGCGACTACAGATCTAAGATCGAGGCCGAGCTCTCCAAAATCTGCGACGGAATCCTTAACCTTCTCGACACGCGTCTCATTCCCTCGGCTACTTCCGGAGATTCAAAGGTCTTTTACCTGAAAATGAAGGGCGATTACCATAGGTACCTGGCCGAGTTCAAAACTGGAGCCGAACGCAAGGAAGCCGCTGAGAGTATCCTCAGTGCTTACAAATCCGCTCAGGATATTGCGAATGCCGAACTGGCTCCAACTCATCCAATCCGACTTGGATTGGCTCTTAACTTCTCTGTGTTTTACTATGAGATCTTAAACTCTCCTGATCGTGCCTGCAACCTTGCTAAACTGGCTTTTGATGAAGCGATCGCAGAGTTGGATACCCTTGGCGAAGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGAGATAACCTCACCTTGTGGACCTCTGACATGCAGGATGATGGAGCAGATGAGATTAAAGAAGCTCCCAAGCCTGAAGGCGAACAACAGTGA 783 51.09 MAASPSPREENVYMAKLAEQAERYEEMVEFMEKVSASVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIEAELSKICDGILNLLDTRLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESILSAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKLAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKPEGEQQ 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2823921 2825934 + Conep20aG0053700.1 Cone20ag0521 460425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0521 260 PIRSF 14-3-3 2 250 IPR000308 -
Cone20ag0521 260 FunFam 14-3-3 protein epsilon 4 251 - -
Cone20ag0521 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cone20ag0521 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cone20ag0521 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cone20ag0521 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cone20ag0521 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cone20ag0521 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cone20ag0521 260 Coils Coil 14 34 - -
Cone20ag0521 260 Gene3D - 1 251 IPR036815 -
Cone20ag0521 260 MobiDBLite consensus disorder prediction 241 260 - -
Cone20ag0521 260 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone20ag0521 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cone20ag0521 260 MobiDBLite consensus disorder prediction 243 260 - -
Cone20ag0521 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Cone20ag0521 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cone20ag0521 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cone20ag0521 260 SMART 1433_4 8 251 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0333 Cone-Chr11:1622365 Cone20ag0521 Cone-Chr20:2823921 2.00E-152 dispersed
Cone18ag1166 Cone-Chr18:8370951 Cone20ag0521 Cone-Chr20:2823921 1.16E-151 dispersed
Cone20ag0521 Cone-Chr20:2823921 Cone8ag0206 Cone-Chr8:1113875 2.84E-122 dispersed
Cone17ag1206 Cone-Chr17:8795615 Cone20ag0521 Cone-Chr20:2823921 1.49E-172 wgd
Cone20ag0521 Cone-Chr20:2823921 Cone4ag1325 Cone-Chr4:10869838 5.69E-163 wgd
Cone20ag0521 Cone-Chr20:2823921 Cone7ag1266 Cone-Chr7:9413986 2.21E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0521 K06630 - gmx:100792014 474.937