Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0545 | ATGGCACCCAGCTTTGACTCTGCTGTGACGAGCCTCTTATGCGCAGAAGACGATACCGTTTTCGATGACAACAACGAATATGTGGGCAAAATGGAGTTTGATCATCATCACAGAAAGAATCGAATCCATGATCAAAACATAAACTTTGATCGCAAAGAAGCAGAAGGGTTGCTATTGATGAGTGAAGAGTGCTTAGGACTATTGTTTGAGAAGGAAGATCAGCATTTGCCTACTCTCGATTATTTGAAGAGGTTGAAAAGTGGGGATTTGGACTTTGCCGCTAGAAAAGATGCTCTTGATTGGATTTCTAAGGTCAATGCTCATTTCTGCTTCGGTCCTCTCTGCTCTTACTTAGCTGTAAACTACTTGGACCGCTTCCTTTCGGCTTATGAACTACCTAAGGGCAATGCTTGGACAATGCAACTACTGGCCGCAGCATGTTTATCACTTGCAGCCAAAATCGACGAAACGGAAGTCCCATTGTCCTTAGATTTACAGGTGGGTGGAGCGAAATTTGTTTTTGAAGCTAGAACAATACAAAGAATGGAGCTTTTAGTGTTAAGCACATTACGATGGAGAATGCAAGCGATCACTCCTTTCTCCTTCATAGACCATTTTCTTCGCATGATTTATGATAATGCTGATCAAAGTTTCTTTCTCCGGTCCATTCAACTAATTTTAAGGACGATTCAAAGTGTCGACTTTCTAGAATTCAAACCTTCCATTATCGCTGCTGCCATAGCCATATCAATTGTACAAGAAACTCAACCACTAGATATAGAGAAATCCATATCTCTTCTCATCCAACATAATGAAAAGGAGAGAGCAGTGAAGTGTATGAATTTGATCAAGGAGGTTGCATTGATTAGTGGGTCTATGAAGGATGGAAGAAGTAGAGGACTGGGTTTAAATTCTGTTCCAAGGAGTCCAAGTGGGATTTTGGACATAGGTGGGTGTATGAGCTATAGCAATACAAGTGATGCATATAATACGGTTGGATCATGTGCTGATTCTTCTCACTATAGGTCAGGAGTGAAGAGGAGAAGGCTAAATAGACCCTGTTGTGAAGTTTGA | 1074 | 41.15 | MAPSFDSAVTSLLCAEDDTVFDDNNEYVGKMEFDHHHRKNRIHDQNINFDRKEAEGLLLMSEECLGLLFEKEDQHLPTLDYLKRLKSGDLDFAARKDALDWISKVNAHFCFGPLCSYLAVNYLDRFLSAYELPKGNAWTMQLLAAACLSLAAKIDETEVPLSLDLQVGGAKFVFEARTIQRMELLVLSTLRWRMQAITPFSFIDHFLRMIYDNADQSFFLRSIQLILRTIQSVDFLEFKPSIIAAAIAISIVQETQPLDIEKSISLLIQHNEKERAVKCMNLIKEVALISGSMKDGRSRGLGLNSVPRSPSGILDIGGCMSYSNTSDAYNTVGSCADSSHYRSGVKRRRLNRPCCEV | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 3036345 | 3038138 | - | Conep20aG0056100.1 | Cone20ag0545 | 460449 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0545 | 357 | SUPERFAMILY | Cyclin-like | 60 | 194 | IPR036915 | - | |
Cone20ag0545 | 357 | CDD | CYCLIN_AtCycD-like_rpt1 | 94 | 192 | - | - | |
Cone20ag0545 | 357 | FunFam | D2/4-type cyclin | 78 | 191 | - | - | |
Cone20ag0545 | 357 | Pfam | Cyclin, N-terminal domain | 67 | 194 | IPR006671 | - | |
Cone20ag0545 | 357 | Pfam | Cyclin, C-terminal domain | 197 | 287 | IPR004367 | - | |
Cone20ag0545 | 357 | SMART | cyclin_7 | 100 | 188 | IPR013763 | - | |
Cone20ag0545 | 357 | CDD | CYCLIN_AtCycD-like_rpt2 | 197 | 283 | - | - | |
Cone20ag0545 | 357 | Gene3D | - | 78 | 195 | - | - | |
Cone20ag0545 | 357 | Gene3D | - | 68 | 265 | - | - | |
Cone20ag0545 | 357 | PANTHER | CYCLINS | 62 | 280 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone20ag0545 | 357 | FunFam | D6-type cyclin | 192 | 281 | - | - | |
Cone20ag0545 | 357 | SUPERFAMILY | Cyclin-like | 179 | 251 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0209 | Cone-Chr20:896176 | Cone20ag0545 | Cone-Chr20:3036345 | 1.56E-47 | dispersed | |
Cone20ag0545 | Cone-Chr20:3036345 | Cone3ag1037 | Cone-Chr3:29188468 | 3.71E-47 | dispersed | |
Cone17ag1189 | Cone-Chr17:8708758 | Cone20ag0545 | Cone-Chr20:3036345 | 5.84E-218 | wgd | |
Cone20ag0545 | Cone-Chr20:3036345 | Cone4ag1308 | Cone-Chr4:10767744 | 1.90E-124 | wgd | |
Cone20ag0545 | Cone-Chr20:3036345 | Cone6ag1538 | Cone-Chr6:12087182 | 1.37E-85 | wgd | |
Cone20ag0545 | Cone-Chr20:3036345 | Cone7ag0848 | Cone-Chr7:6444069 | 4.40E-125 | wgd | |
Cone20ag0545 | Cone-Chr20:3036345 | Cone9ag1454 | Cone-Chr9:10785867 | 1.74E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0545 | K18810 | - | cit:102630732 | 386.341 |