Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0618 | ATGTTATCCGACTTGATTAACTTTCTCCGGTCCTGTTTCCGACCAAGCTCGAACTGTCATGTCCACACCGGTCCAGGTGCCGACTCAACCGGCCGCCAGGACGGGCTACTATGGTACAAAGATGTTGGGCCGCACATGAGTGGTGAATTCTCAATGGCTGTAGTCCAAGCAAACAACTTGCTTGAGGATCAGAGCCAGCTTGAGTCAGGCTGCTTGGGCTCACATGAGTCCGGCCCGTATGGTACATTTGTCGGTGTATATGACGGCCACGGTGGGCCCGAAACTGCCCGCTATGTAAACAATCACCTCTTCCAACATCTCAAGAGGTTTGCTTCCGAGCAAGAAAATATATCAATGGAGGTGGTAATAAAAAAAGCATATCAAGCGACAGAAGAAGGTTTTACATCTATAGTAACCAAACAATGGCCAACCAGCCCGCAAATTGCAGCCGTTGGATCGTGCTGCTTGGTTGGCGTGATTTGTGGTGGGACCCTTTACATTGCTAATGCAGGTGATTCACGTGCCGTTTTGGGGAGGGCCGTAAAAGAAACAGGCGAGGTTCTTTCAATTCAGCTTTCAACCGAACACAATGCAAGTATCGAGTCCGTTAGACAAGAGCTCCATGCCTTACATCCGGATGACCCACAAATTGTCGTCTTGAAGAATGTATGGCGTGTAAAGGGTCTTATACAGATTTCTAGATCTATTGGTGATTTATATCTAAAAAAGCCGGAGTTCAATAGGGAGCCTTTATTTGCGAAGTTTCGTCTTAGAGAACCGTTCAAAAGGCCTATATTGAGCTCTGAACCGTCCGTTTCAACTATTCAATTGCATCAACACGACCGGTTCATCATATTTGCATCAGACGGTCTATGGGAACAACTTACGAATCAGGAAGCAGTTAGTATAGTTCAAAAGCATCCACACAACGGAAGTGCGAAGAGGCTTGTGAAAGCTGCTTTAAAAGAAGCGGCGAAGAAGAGAGAGATGAGGTATTCCGATTTGAAGAAGATCGATCGACGTGTGAGGAGGCATTTTCACGATGATATTACCGTGATTGTATTGTTCTTTGACTCGGATGGTGTTTTTAAGGCTACTAGCTCTTTGAAGGGGGGTCCAAATATTTCGGTGAAAGGTGGTGGAGTTAATCTGCCTCATAAGACTCTGGCTCCTAGTAGTTGA | 1182 | 46.11 | MLSDLINFLRSCFRPSSNCHVHTGPGADSTGRQDGLLWYKDVGPHMSGEFSMAVVQANNLLEDQSQLESGCLGSHESGPYGTFVGVYDGHGGPETARYVNNHLFQHLKRFASEQENISMEVVIKKAYQATEEGFTSIVTKQWPTSPQIAAVGSCCLVGVICGGTLYIANAGDSRAVLGRAVKETGEVLSIQLSTEHNASIESVRQELHALHPDDPQIVVLKNVWRVKGLIQISRSIGDLYLKKPEFNREPLFAKFRLREPFKRPILSSEPSVSTIQLHQHDRFIIFASDGLWEQLTNQEAVSIVQKHPHNGSAKRLVKAALKEAAKKREMRYSDLKKIDRRVRRHFHDDITVIVLFFDSDGVFKATSSLKGGPNISVKGGGVNLPHKTLAPSS | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 3681526 | 3684383 | - | Conep20aG0063500.1 | Cone20ag0618 | 460522 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0618 | 393 | ProSiteProfiles | PPM-type phosphatase domain profile. | 64 | 357 | IPR001932 | - | |
Cone20ag0618 | 393 | SMART | PP2C_4 | 43 | 355 | IPR001932 | - | |
Cone20ag0618 | 393 | Pfam | Protein phosphatase 2C | 81 | 326 | IPR001932 | - | |
Cone20ag0618 | 393 | FunFam | Phosphatase 2C family protein | 38 | 367 | - | - | |
Cone20ag0618 | 393 | Gene3D | - | 42 | 363 | IPR036457 | - | |
Cone20ag0618 | 393 | PANTHER | PROTEIN PHOSPHATASE | 45 | 356 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone20ag0618 | 393 | CDD | PP2Cc | 50 | 357 | IPR001932 | - | |
Cone20ag0618 | 393 | SUPERFAMILY | PP2C-like | 59 | 358 | IPR036457 | - | |
Cone20ag0618 | 393 | ProSitePatterns | PPM-type phosphatase domain signature. | 83 | 91 | IPR000222 | GO:0043169(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0836 | Cone-Chr12:7563588 | Cone20ag0618 | Cone-Chr20:3681526 | 3.61E-213 | dispersed | |
Cone12ag1243 | Cone-Chr12:9613531 | Cone20ag0618 | Cone-Chr20:3681526 | 9.37E-217 | dispersed | |
Cone20ag0618 | Cone-Chr20:3681526 | Cone8ag1300 | Cone-Chr8:10628497 | 3.30E-209 | dispersed | |
Cone17ag1098 | Cone-Chr17:8157709 | Cone20ag0618 | Cone-Chr20:3681526 | 3.15E-245 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0618 | - | - | - | 0.0 |