Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0626 ATGAATAATGGAGAACCGAGGAAATCAACGACTGGATTGGTGGCGGTAGCCATAGACAAGGATAAGAGTAGCCAGTTAGCTCTGAAATGGACCTCTGATCATCTTCTTCAGAGAGGCCAACGCCAAGCCCTAATTCTCATTCATGTCAAGCTCAGATCGTCGCCGCTTCCCAACAATCCTCATCTCTCTTCCCCGAGGCTGAGTTCTGCCGCTGATCCTTTGGACATCTTATTCTCGGATCCTGATACTCACACCAAAGAGTTGCTCCTTCCTTTTCATTGTTTCTGTACTCGTAGAGATATAGAATGCACTGACATCATTATAGAAGACGTAGATGTTGCGAAGGCACTAATCAGATATGTAACCCACTCAGGAATTGAAACTCTGGTCCTTGGTGCAGCAAAATCTGGCTTTCTAAGAAAATTCAGGGCAATAGACATCCCTGCCAGTGTAATAAAAAAAGCACCAGGCTTTTGCAATGTTTATGTCATATCAAAAGGAAAACTCCAATCTTTTCGGGCTGCATCACAACCCATGCCAGTAAAACCTGAAGATAGCCAATCGTTTAGCCAAGCTAGCAAAAGGCCAGATTCACCTCGCCCATATGCGCCCCGGAGAGGATTTGAAAAGTCTGCCTCTGACTCACCATCAAAATCACTTGAGAAGACTGAATTCTTTAGGTCACCATTCACTCGGAAAGGTTATGAAGGCAAATTACATGGGGAAGTCCCGCCTGATACTGATATATCCTTCATCAGCTCTAACAGGCCAAGTGTGGATCGCATGTTCCCTTCTTTTTATGATAACCTAGATATGGACATGGCCAATCCATGGATGTCAAGTGGCACAGAAGCAGATATAAATAGCGGCTTTGAAGATCTGCAGGATGGACGGGAGTCTTTGGATTTGCATTTGGGGCCTGAACTCTTTTCAGTCTCACAAGGAGAGAGATTATCAACCTCGTCAGTGGCTGTTGTGGAGGAAGAGATGAGGAGGCTACAGCAGGAACTCAGGAGAACCATGGAAATGTATAGTACAGCCTGCAAGGAAGCATTAACGGCGAAAAAGAATCAATTCGAGCTACAGCGCTTGAAAATGGAAGAAAGAAGGAAATTAGAAGAGGCACAACTTGCTGAGGAAGCCGCATTAGCAATTGCAGAACAGGAAAAAGCCAAGTCCATAGCAGCTGTTGAGGCTGCTGAAGAAGCTAAAAGGATTGCTGATCTGGAAGCACAAAAAAGAATTAGTGCAGAAATGCAAGCATGCAAAGAAACAGAAGAGAAGAAAAAGGCAATTGATGCTTTATCTCAGACTGATATGAGCTGTAGGAAGTATTCAATCGAGGAGATAGAATCTGCAACAGACTGTTTCTCAGACTCGCTTAAGATAGGGGAAGGGGGCTATGGGCCTGTATATAAAGCAATTATGGACCATATTCCAGTTGCAATTAAGGTTCTACGTCCAGATGCCGCTCAAGGAAGGTCACAGTTTCAACAGGAGGTAGAAATACTAAGCTGCATGCGTCATCCAAACATGGTCCTTCTCCTTGGAGTCTGCCCGGACTACGGCTGCTTAGTCTATGAGTTCATGGCCAATGGAAGCTTAGAAGACTGTCTTTTCCGCAGAGGAAATACACTAGCTCTCTCTTGGAAAAATAGGTTCAGAATTGCAGTTGAAATTGGCACCGGACTACTCTTCCTCCACCAGACCAAACCGGAGCCGCTTGTCCACCGTGATCTCAAACCAGCCAACATCTTGCTTGACCACAACTTGGTCAGCAAGATTAGTGACGTGGGCTTGGCTCGGTTAGTCCCCCCTTCTGTAGTAGATAGCGTGACTCAGTATCGAATGACATCAACAGCTGGCACTTTCTGTTATATAGATCCCGAGTATCAACAGACTGGAATGTTGGGAGTAAAGTCCGACATTTATTCTCTAGGGATCATATTCTTACAATTGATCACGGCTAAGCTACCAATGGGTTTGACACATCATGTTGAAAGGGCTATTGAGAACGGAACTTTTTCTCAGTTGTTGGATCCATCAGTGCCGGATTGGCCGGTTGAACAGGCCTTGGCCTTTGCCAAGCTGGCTCTTAAATGTGCGGAGTTAAGGAGAAAAGACAGACCAGATCTAGCCAGGGTTGTCTTGCCGGAACTTTACAAGTTTCAGGACATTTTCTGA 2184 45.19 MNNGEPRKSTTGLVAVAIDKDKSSQLALKWTSDHLLQRGQRQALILIHVKLRSSPLPNNPHLSSPRLSSAADPLDILFSDPDTHTKELLLPFHCFCTRRDIECTDIIIEDVDVAKALIRYVTHSGIETLVLGAAKSGFLRKFRAIDIPASVIKKAPGFCNVYVISKGKLQSFRAASQPMPVKPEDSQSFSQASKRPDSPRPYAPRRGFEKSASDSPSKSLEKTEFFRSPFTRKGYEGKLHGEVPPDTDISFISSNRPSVDRMFPSFYDNLDMDMANPWMSSGTEADINSGFEDLQDGRESLDLHLGPELFSVSQGERLSTSSVAVVEEEMRRLQQELRRTMEMYSTACKEALTAKKNQFELQRLKMEERRKLEEAQLAEEAALAIAEQEKAKSIAAVEAAEEAKRIADLEAQKRISAEMQACKETEEKKKAIDALSQTDMSCRKYSIEEIESATDCFSDSLKIGEGGYGPVYKAIMDHIPVAIKVLRPDAAQGRSQFQQEVEILSCMRHPNMVLLLGVCPDYGCLVYEFMANGSLEDCLFRRGNTLALSWKNRFRIAVEIGTGLLFLHQTKPEPLVHRDLKPANILLDHNLVSKISDVGLARLVPPSVVDSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLITAKLPMGLTHHVERAIENGTFSQLLDPSVPDWPVEQALAFAKLALKCAELRRKDRPDLARVVLPELYKFQDIF 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3739895 3744307 + Conep20aG0064400.1 Cone20ag0626 460530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0626 727 FunFam Os07g0541700 protein 530 620 - -
Cone20ag0626 727 Gene3D Transferase(Phosphotransferase) domain 1 530 725 - -
Cone20ag0626 727 Gene3D Phosphorylase Kinase; domain 1 434 529 - -
Cone20ag0626 727 SMART serkin_6 457 721 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone20ag0626 727 CDD STK_N 13 167 - -
Cone20ag0626 727 MobiDBLite consensus disorder prediction 175 223 - -
Cone20ag0626 727 Coils Coil 323 403 - -
Cone20ag0626 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone20ag0626 727 Pfam Protein kinase domain 460 713 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone20ag0626 727 ProSiteProfiles Protein kinase domain profile. 457 727 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone20ag0626 727 MobiDBLite consensus disorder prediction 181 195 - -
Cone20ag0626 727 Gene3D HUPs 2 164 IPR014729 -
Cone20ag0626 727 Pfam Universal stress protein family 14 156 IPR006016 -
Cone20ag0626 727 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 164 - -
Cone20ag0626 727 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 429 529 - -
Cone20ag0626 727 SUPERFAMILY Protein kinase-like (PK-like) 437 716 IPR011009 -
Cone20ag0626 727 PANTHER OS02G0152300 PROTEIN 14 724 IPR051348 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0333 Cone-Chr16:4250297 Cone20ag0626 Cone-Chr20:3739895 7.91E-246 dispersed
Cone17ag0007 Cone-Chr17:59149 Cone20ag0626 Cone-Chr20:3739895 2.86E-93 dispersed
Cone20ag0626 Cone-Chr20:3739895 Cone20ag1403 Cone-Chr20:8955612 1.90E-241 dispersed
Cone17ag1090 Cone-Chr17:8122820 Cone20ag0626 Cone-Chr20:3739895 3.06E-64 wgd
Cone20ag0626 Cone-Chr20:3739895 Cone4ag1867 Cone-Chr4:13376518 1.02E-215 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82550 PF10961 SelK_SelG 2.50E-18 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0626 - - - 0.0