Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0659 ATGGAACACATGAGAACTCCCTTCAAGGGTGTAATCAAAGATTTTAAAGGAAGAGCGGCGTTCTATAAGCAGGATTGGATTTGTGCACCTGGTTCGGGAATCAGGATTTTGGCTCCTACTATGTATATCTTCTTTGCTTCTGCTCTTCCTGTTATTGCCTTTGGAGAGCAATTGAGTAGGGAGACAGATGGAAGCTTGAGCCCGGTCGAAACATTAGCTTCGACTGCTCTTTGTGGAATCATTCACTCAATCATTGGGGGACAACCATTGTTGATTTTGGGAGTTGCAGAACCCACAGTTATCATGTACAGTTTCTTGTACAGTTTCGGCAAAACAAGGCCGGGGATAGGGCCCAAGCTTTATTTGGCATGGGTTGGATGGGTTTGTGTTTGGACGGCACTCCTCCTCATTCTTCTCGCAATATTCAACGCATGCACCATCATCACTAAATTCACAAGGGTTGCCGGGGAGCTTTTTGGCATGTTGATTGCTGTTCTTTTCGTTCAACAGGCTATAAAGGGAGTGCTCAGTGAATTCAAAATCCCAAAAGCTGAAAATCCAGATGCTGAAAAGTACCAGTTCCAATGGTTGTATGCAAATGGGCTGCTAGCAGTTATTTTTACGTTTGGTGTACTCTTGACTTCTCTAAAAAGTAGAAAAGCTAGATCTTGGCGATATGGCATGGGATGGTTTCGAAGTTTCATCGCAGACTACGGGGTTCCCCTTATGGTCTTGGTCTGGTCAGCAATGTCTTTCGGGGTACCCAATAAAGTTCCAGATGGAGTTCCAAGGAGACTCTTCTGTCCACTTCTATGGGAGTCTGCATCGTTGTACCACTGGACAGTGATGAAGGATATGGGGAAGGTTCCAGTGGCGTACATCTTTGCCGCCTTTATACCAGCCGTGATGGTAGCAGGGCTATACTTTTTTGATCATAGTGTAGCTTCACAATTGGCGCAACAGAAGGAGTTCAATCTTCAAAAACCATCTGCATACCATTATGATATCCTCTTGCTTGGAATTATGACTCTGATTTGTGGTTTGCTTGGACTTCCTCCTTCTAATGGTGTCCTCCCACAGTCCCCAATGCACACCAAGAGCCTGGCTGTTCTCAGAAGGCAGTTCATCAGAAGGAAAATGTTAAAGAGCGTCGAGGAATGCATCAAAGAAAATGCAAGCAACCAAGAAATGTACGGAAAGATGGAAGCCGTGTTCATTGCTATGGACACACCTCCAACGCCTAAAGAGTTGGAGGTCATGAAGGACGCTGTACTGAAATCTGACCACGAGGGCGGAACGGAAAAGGGAAAATTCGATCCAGAAAAGCACATAGATGGTTTCTTACCTGTTCGTGTGAACGAGCAGAGGATTAGCAACCTTTTGCAATCCCTTCTCGTGGGACTATCAGTATGTGTTATACCCCTATTAAAAAAGATCCCCACCTCTGTTCTATGGGGTTATTTTGCTTACATGGCCATTGACAGCCTCCCCGGAAATCAGTTTTGGGACAGAATGATGCTCCTGTTCGTTACACCAAGTCGGCGTTTCAAGTAA 1554 45.17 MEHMRTPFKGVIKDFKGRAAFYKQDWICAPGSGIRILAPTMYIFFASALPVIAFGEQLSRETDGSLSPVETLASTALCGIIHSIIGGQPLLILGVAEPTVIMYSFLYSFGKTRPGIGPKLYLAWVGWVCVWTALLLILLAIFNACTIITKFTRVAGELFGMLIAVLFVQQAIKGVLSEFKIPKAENPDAEKYQFQWLYANGLLAVIFTFGVLLTSLKSRKARSWRYGMGWFRSFIADYGVPLMVLVWSAMSFGVPNKVPDGVPRRLFCPLLWESASLYHWTVMKDMGKVPVAYIFAAFIPAVMVAGLYFFDHSVASQLAQQKEFNLQKPSAYHYDILLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQFIRRKMLKSVEECIKENASNQEMYGKMEAVFIAMDTPPTPKELEVMKDAVLKSDHEGGTEKGKFDPEKHIDGFLPVRVNEQRISNLLQSLLVGLSVCVIPLLKKIPTSVLWGYFAYMAIDSLPGNQFWDRMMLLFVTPSRRFK 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4008887 4012578 - Conep20aG0067900.1 Cone20ag0659 460563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0659 517 Gene3D Helical hairpin bin 18 60 - -
Cone20ag0659 517 Pfam HCO3- transporter integral membrane domain 7 184 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone20ag0659 517 Pfam HCO3- transporter integral membrane domain 199 374 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone20ag0659 517 Pfam HCO3- transporter integral membrane domain 450 511 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone20ag0659 517 PANTHER ANION EXCHANGE PROTEIN 4 513 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0659 Cone-Chr20:4008887 Cone2ag0909 Cone-Chr2:34900850 3.55E-224 dispersed
Cone17ag1040 Cone-Chr17:7855980 Cone20ag0659 Cone-Chr20:4008887 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0659 K24194 - csv:101220188 810.446