Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0663 ATGGATTCTCCTGAAACTGAGAAGACAACTTCCGCCTCCATTTCCCTTACCAACACTAGCACCTCCATTTCCTTGGGGTCTCCGCAAGTTCAAGACTCCCCTTTATTCAGTTACATAAGTAACCTATCGCCAATTAAGCCGGTCAAGGGTCTACTTATAGGCCAAGGGTTCACTGCACTTAATTCTCCTCCTCTTGTATTTTCTTCACCACATGTGAATTCGAACTGTGTGACAAATTTCTTGAAAAGGGCTCAGCATACTCATTCACCTAGTGCATTAGTCTCTACAAACAATGCTGAAGTAGAGAAATCTGCTGATGGTTCAGATGATGCTGAGAAATGTGCAAGACAGTTATGTAGGAGATTGGTTACTGGCATCCTGGAATCTGATAATAAGATTTCCGAGCAATCACCCTGCAGATCTTCAGAATTTCTTGACAATTTTTTGGCTGATTCTGATGATGTGGATAGTAGTAACTCTATGCATGCAGTCAGTCCACATTTAAAACAATCTAATGATAGGCTGCCTGAATCATCACAATGTGCATTAAATGCTATAGTCAAAGAGCCGGAGGAGCTGTTGTTGTCAAAGGAAGCGAAAAAAGGCAATCAGGAAAATGCAGAATTTGATTGCAACCCTGCCACAGGAGAAAAGCAACAAAAGGACGTTGACTATCCATCCTCTGAATTCAATGATATTGAGTCTGATTTTTCCAATAAATTTGCTAATGATAAACAACAAAATGAAGATTCATGTGCTCAGGATACTGGGGCATTCCCTCAAAATGACTTTGAGTGTACTCCTCAATCGGAACCTCTAGAGATTGTTAATGCTTGTGAATATAGTGAGGAGAATGCTGGAGAGGTCTCTAATAGTCTTTCTGAGGTCCGTCAAAATCAACGTGGCATGCATCGACGTTGCCTGCAATTTGAAGAGGTTGCCTTAACTGCTATTGGAAACAGATCCCATTCTTCTAATCTGACAGATAATAATATCAAGTCAAGATTACTATCCACGAATGTAACAAATGAGAGTCAAAAGTCATCTGGGATGTTTTCAAATCCAACTTCTGGAAAACAAAATCCAGTAAGCTTGTCCCAGCCTGTGGCTGCTTTGTTACCTCCATGCTCCAAGCCTTTAGGTATTGGATTGCATCTAAATAGCATTGTCAGTGCTATGCCAACGGGTTCCAGTTTAGTTGCAAGCATGAAATTAGCGGAAGATTATGACAGTTTTCAGGGTGTGGAGACAGTGGTAAAGAGCAGTCATTTGCTGAGCAGAAACACCTGCTTTGAAAATGCTTCACACTGTGGTGAAGATGAGATGCATGAAAACAACACCTTAATAATGGCAGGTTCTACCACTTCTGAGCTTTACTGTGCCATGGAACCTTTAAATGTGCCAAACAATGTCGGATGTCAAGCAACTCCAGATGGGACAGAGAAGTTTATTGATAATCTGGAAGAGTTCAATAAACTGAGCCCCAAAAAGAAAAGGATTAAAACTGATGGTGATGGTTTCAAAGGTTGTAACTGTAAGAAGACAAAATGCTTGAAACTTTATTGTGACTGCTTTGCTGCTGGGGTCTATTGTGGCGATGCTTGTGCTTGCCAAGGATGCTTTAATAGACCGGAGAATGAAGAAACGGTTCATGAAACACGCCACCAAATTGAATCACGAAATCCTCTGGCATTTGCCCCGAAAATTGTGCCCTGCCTCACTGAGATTCCTCTGAAAAAAGTAAATGGAACTCAGTCAACTCCATCATTGGCAAGGCATAAAAGAGGGTGCAACTGCAAAAAATCCATGTGTCTTAAAAAGTATTGTGAATGCTATCAGGCTAATGTTGGATGCTCTAGTGGATGCCGTTGCGAGGAATGTAAAAATGTCTATGGCAGAAAAGAAGAATATGTTGCAACAATGCATGGATCAGAAGGGAATCTCAATGAGAATCTTGAAATGATAGCAACTATGAAAGATTTCTCACATGCTGAAATTCATGGCCAGCACCTTACCCCTGTGACGCCATCTTTTCAATACTCAGACCATGGAATGGACGCACAAAGACCACACCATGTTTCTCGAAGATGTCTCCCTTCACCCGACTCTGATCTTATATCTTACGCCAACTCCACTTCCTCCCCTAAGAATTTGGACAATAAGGATATGCTTCTGGAAGAAAAGAATGACTCGCAGGACTTAGGCTATTACGCATGGCAGATAAGTTATGACAATGCTGACATGGCGGATCCAGAGCATACCTCACCAAGATCAAACGACATCCCAAGCTTAAATCAGCTTACTCCTCTACAACATCACCCCTCAATGACTACTATGGCCTCATCTACAACATCCAAGTCAAAGGACCGGTCAAACACGTTTTGTGGTCAACCCTTCTCAACTGGTGGGTCCCTTAGGCGGCTTACTCCACCAATCACACCTTTAACCTGGTTAGGTGCGACTAAGTCTTTCAAACTTGCGGGTCCTCAAACTGTGGAAGATGATACGCCTGAGATATTGAAAGACAATGATAAAACACCAATTCGATCTGTGAAAGTAAGCTCTCCGAATAAGAAGCGGGTTTCTCCTCCACATTGCCATGTGCTTGAGCGTGGATCGAACTCTATGGGATCTTTGAAAAGTGGGCGCAAGTTTATACTGAAGGCAGTACCTTCCTTTCCACCTCTTACTCCTTGCATTGATTCCAAAGGTGGCTCTGGTGCAAGTCGAAGTGAATGTGCAGATAATAGTGGCGGCGGCAAGTGA 2766 42.41 MDSPETEKTTSASISLTNTSTSISLGSPQVQDSPLFSYISNLSPIKPVKGLLIGQGFTALNSPPLVFSSPHVNSNCVTNFLKRAQHTHSPSALVSTNNAEVEKSADGSDDAEKCARQLCRRLVTGILESDNKISEQSPCRSSEFLDNFLADSDDVDSSNSMHAVSPHLKQSNDRLPESSQCALNAIVKEPEELLLSKEAKKGNQENAEFDCNPATGEKQQKDVDYPSSEFNDIESDFSNKFANDKQQNEDSCAQDTGAFPQNDFECTPQSEPLEIVNACEYSEENAGEVSNSLSEVRQNQRGMHRRCLQFEEVALTAIGNRSHSSNLTDNNIKSRLLSTNVTNESQKSSGMFSNPTSGKQNPVSLSQPVAALLPPCSKPLGIGLHLNSIVSAMPTGSSLVASMKLAEDYDSFQGVETVVKSSHLLSRNTCFENASHCGEDEMHENNTLIMAGSTTSELYCAMEPLNVPNNVGCQATPDGTEKFIDNLEEFNKLSPKKKRIKTDGDGFKGCNCKKTKCLKLYCDCFAAGVYCGDACACQGCFNRPENEETVHETRHQIESRNPLAFAPKIVPCLTEIPLKKVNGTQSTPSLARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEECKNVYGRKEEYVATMHGSEGNLNENLEMIATMKDFSHAEIHGQHLTPVTPSFQYSDHGMDAQRPHHVSRRCLPSPDSDLISYANSTSSPKNLDNKDMLLEEKNDSQDLGYYAWQISYDNADMADPEHTSPRSNDIPSLNQLTPLQHHPSMTTMASSTTSKSKDRSNTFCGQPFSTGGSLRRLTPPITPLTWLGATKSFKLAGPQTVEDDTPEILKDNDKTPIRSVKVSSPNKKRVSPPHCHVLERGSNSMGSLKSGRKFILKAVPSFPPLTPCIDSKGGSGASRSECADNSGGGK 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4043960 4048297 - Conep20aG0068400.1 Cone20ag0663 460567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0663 921 MobiDBLite consensus disorder prediction 343 363 - -
Cone20ag0663 921 ProSiteProfiles CRC domain profile. 506 632 IPR005172 -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 897 921 - -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 88 110 - -
Cone20ag0663 921 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 900 IPR044522 GO:0003700(InterPro)
Cone20ag0663 921 MobiDBLite consensus disorder prediction 201 224 - -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 749 807 - -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 1 28 - -
Cone20ag0663 921 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 508 543 IPR005172 -
Cone20ag0663 921 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 594 629 IPR005172 -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 155 176 - -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 756 807 - -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 88 102 - -
Cone20ag0663 921 MobiDBLite consensus disorder prediction 834 864 - -
Cone20ag0663 921 SMART CXC_2 592 633 IPR033467 -
Cone20ag0663 921 SMART CXC_2 505 546 IPR033467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0733 Cone-Chr16:8445233 Cone20ag0663 Cone-Chr20:4043960 1.77E-33 dispersed
Cone20ag0663 Cone-Chr20:4043960 Cone4ag0261 Cone-Chr4:1167255 1.16E-59 dispersed
Cone17ag1032 Cone-Chr17:7825791 Cone20ag0663 Cone-Chr20:4043960 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45616 PF00916 Sulfate_transp 2.50E-124 CL0062 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0663 K21776 - cit:102611790 648.277