Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0680 ATGTGTCATAACTGTACCATGGAGAATGGGGATTCCCTTAATTTAGACAAAGGAGGACCCATGCCTTCTGGCAAAATCTGTGGAGAGAAACAGGGGTGGGAATATCTAAAGCAGGCTAATGCAAGCCCAATAATAAGTCCTGTGCCTACCCTGTCAAGCTGTGATAGCTCCATCTCTAGCTTCAGTGATTATTCTGTTGAGTTAAACTCAAATGAAAGGGATAATCAAGCAGGTCCACTAGGTAGGAATCATGAAGATCTCAACTGTAGGTTAGATTTGAAACCACATCAATCAAGTAATGGATGGAGAGAAAGAGATGTTATAATACAATCAAATCACAATCAAGAAGCACAAACTAGCAGTCCTGGAGACTGTAAGAGATCAGTAAATGAGGCTGACAACGATCTTCCTCTTTATGGTGAGATGGATCCTGAAATCTGGGAGCCTCCTGGACCAGAGGACCCTGAGGATGATATGGATGGTAGTGTAGCTTATAGTGACGATGATGAGTGTGGTGATGGCACAGTATGGGGAAAATCAAGTTCTCTTAGACACTCAGGAGAAGAAGGAAGTGGTGGCTACAGATTAAAAGAAGAAAAGAAACGGGTGATGGAAGAGGTTAGAAATGGAAAATTTAAGGCCATCGTATGTCAACATATTAAATCCGTTGGAGTTGTCCCCTATGGTGAAGATGGTGAAAGTTGGTTGGATATAGTGACTTCTTTGTCATGGGAAGCTGCTTCATTTTTGAAGCCTGATGCTGTTTATGGTAAGGCAATGGATGCAAGTTGTGATGTAAAAGTGAAGTGCATTGCAACAGGTTCTCGCAGTGAAAGTCAATTTATCAAAGGTTTGGTCTTTAAAAAGCACGCAGCGCACAAGCACATGCCAACTAAGTACAGAAACCCAAGGTTGCTGCTGAATAAAGGCATGCTTGGTCACTCTTCAAGTGGGTTATCATCATTTGATTCAATGGATCAGGAAAAGGATCATATGATGAAGTCTGTAACTGAGATGATTGAACTCTGCAACCCTAATGTGGTGTTAGTCGAGAAAACTGTTTCCCGTGATATCCAAGAGTCTATTCTGAAGAAGGGAATGACACTAGTGGTTGATATGAAGCTCCATCGATTAGAGAGAATTGCTCGTTGTACTGGTTCCCCGATTTTATCACCTCAAGATTTGATGAATAAGAAGTTAAAACAATGTGATTCCTTTCATATCGAAAAATTTGTAGAGGAACATGCTGAATGTGGCGAGGGAGGAAAGAAGCCAAGTAAAACATTAATGTTTATTGAGGGATGTCCAACACGTCTCGGTTGTACGATTTTGCTCAAAGGAGCCCACAGTGATGAGTTGAAGAGGATTAAATGTGCTGTGCAGTGTGCAGTAGTTATGGCCTCTCATTTAGTACTTGAGAATTCTTTCCTTGTTGATCAGAGAGGAATGTTTTCTACAATTCAAACTGGAGTGGCAAGTATATTTCCGCCTTATCAAGTGTTCAGTGAAGTAGTTTCTGGTAATCTAAGTGTCAATACTGTTAAGGAGTCAACTGCTGGAAACAGTTCATCTACAATTGATTTATCGATCAATGGAATCCAGGAGGGAGGCTTTGACAATCTTAAGTTTGAAATAGAAGGTAATTCCACGATCTTTAATCAGCCATACAATCCGGCTATCTTATCTGGGTGGACATCCCTTTCATCTTCTCTGAAGAAAGTTATAGATGAACGTATCCCTTTGGAAAATTCTTATTATAGCTTTCATGGAAGCAATCCCGATACTGAGACTGTAAAAGATGTTTCTGTTTCAAGTACACCCGAAGCGAGTGATCATTCTGATTTGGAAATTAAAGGTGGTTCTGATGACGAGTATTCGGTTATAGCTGAACAATATAAGCATCTGCCAGAGGTTTCTGATAAGCCCCCAGAGATGGAAAAAGACCTCATTCAAAATAAGGACGACACCAACACTGCACTTGATTCTCAAAGTATTCTAGTTTTGATGTCTGTACGGAATTCCTTGAAAGGGACTATTTGTAAACAAAGTCGCTTTTCCCATATCATGTTCTACAAGAACTTTGATATTCCTCTTGGAACGTTTCTGCAGGAAAATTTACTTAATCAGAGAAACAAGTGCACCACCTGTGACGAACTGCCTGAAGGTCACTCTTACTATTACGCGCATCACAACAAGCAGCTTACGATACAGGTCAAACAGTTTTCAGGAGGAAAGAGTTTGCCTGGGTATACAGAAGGAAAAATTTGGATGTGGAGTCGTTGTGGAAAATGTAAGTCTGGGAAGGGAATCGCAAATTCCTCAAAGAGTGTTTTGCTTTCTTCTGCTGCTCGGTGTCTATCATTCGGAAAATTCTTGGAGCTTAATTTCTCCAATCACTCTTCATCTAGTAAATCATCCAGCTGTGACCATTCTTTGTTGAGGGACTTCCTTTGCTTTTTTGGATTGGGCAACATGGCGGCTATGTTCAGATATTCAAATGTTGCAACTTATACAGTCTCTATGCCACCTCAAAAGCTCGAGTTCAAAATTTCAATTAGACCAGAGCGGGTCATGAAAGAAACTTATATGGATGTAAGAAAGAAAGGAGATCTCTTATTCGCAGAAGTTGCAAACTGTTTGAAGACGATCAGATCTCAGTTTGAAAGCTCAACTACAAACCTTGAAGGCTCTCTTCAAGAAGTCTCTCTGGTTGAAGAAATTTTAGATAAGGAAAGATCTGAGTTTGAGGTTAACCTTCAAAATGTTATTTCCAAGGATGCAAATCCTGATCAAGCAATTTACAAATTTCTTGTCTTGAACCGATTACGGTGTGAGCTTCTGCTTGAATCGTGCATTTGGGATCGGCGTCTGCATTCACTACTTGCATCAGAACGAGTATATTCAAAGACGAACAGCGGTGTTGATAGGGGAAGTGAAAGGAGAGAATCAGCTGAATATGGCTATGTAGCCAGTGATGAAAGCCCCAACTTAAATGCTGAGTCCTATAATTATCAAGAGCGAAACAAATTTTTGGTCAAAGAAATTCCAGTTGAAGGTTGTGATAAAGAATGTGGAGGAGGTGATCTATTAAGCGCATCTTCTGTTGCTGAAGTCATAAAGCCACCAATTGAAGATGGTCCAAGCCCAAAGGGATTCTCTGATGAGGAGTCTGTTCAAATTAAACCAAAGGGCTCCATTGACAGTCATTCTGACGATGATAGCAGTCACAAAGAGAGTTTTAATTCACATAATCATTTACAGTTGCAACGGACCGTTATGAATTCCACTGATTACGAGTATACCAATTCCATGACCATAAGAGATATTTCAAACGAAGATACATTGGGCCATCCACTGGGATCCAGCTCAGGAAATTCTATTGAATGGTTCTGGAGTCCATTTGCAGATGTACGGCAGATTGAACTTGATCTCTTACAGAGAAGTTACTTACCAAAAATTGAGTCTATCAGCAGCTATATGCGGAAAAACTTACCCTCAGCTTATCAACTGATAATTGATGAAGCAAGAAGGCTGCACATTCCTCTTGGAACAGATAGTTATATTGTGTCTGACTATGAGACTGAACTCTCAAGCATCATCGCTTGTATGATGGCATTGTTGAAAGATCAACCTATTCAGACAGAAGTTTTTGATTCTTATAGTAAGTCCAAGGGACGAGGTTTTGCAAAATCAAGTGAGAGTTTACAAAGCCTGAATCGTATTCCCTCTAATAGCTCTTCAGAGTCTGATTCAGTGCATTCTAGCACAAGCAGTATCACAGAAAAGTCACACTTTTCTAGTTTTGATGGGTTGATTTTTCTGGATTCCTTGGTTCCAGAGACTTTTAAGCCTACAGAACACGAGGGGATTGCAAAATCATTTGGAAAGGGTAAATACTTAGTGAATTGTCCGTACTTCAGTCGATTTAGGGATCTTCGGAGTAGATGCTGCCAATCCGAGCTTGACTATATTGCTTCTTTAAGCCGATGTAGGAACTGGGATGCCAAAGGTGGGAAGAGCAAATCGTTTTTTGCAAAAACACTTGATGACAGGTTCATCATAAAAGAAATTAAGAAAACAGAATATGATTCTTTTATGAAGTTTGCTCTGGAATACTTCAATTACATGAATCAGTCATATGAGGTGGGAAACCAAACCTGCCTTGCTAAAGTGCTTGGCATTTATCAGGTAACTGTAAGGCATGAAAAAAGTGGGAAGGAGACCAGACATGATATGATGGTGATGGAGAATCTTACTTTTGGCCGTAAAATTACTCGTCAGTATGATCTTAAAGGAGCTCTATATGCTCGGTACAATACAGCTACTGCTGGATCAGATGTTCTCTTGGATCAAAACTTTGTAAACGACATGAATTCCTCCCCATTGTATGTTAGTAACAACGCAAAGCGTCTCTTGCAGAGGGCTGTTTGGAACGACACAACGTTCCTCAATTCTATCAATGTTATGGATTACTCCCTACTTGTTGGAGTTGATACTGAGAAACGGGAACTTGTATGTGGTATCATTGATTATCTTAGGCAGTATACTTGGGACAAGCAGCTAGAGACATGGGTCAAGTCTTCGCTTGTTCCGAAAAACGTTTTGCCAACTGTCATCTCTCCAATAGAGTACAAGAGAAGATTCCGGAAGTTTATGTCTACACATTTCCTGAGTGTTCCGGATCACTGGTGCTCTGAAGATTCTTCGGACCCATGTGAACTCTGTGGCGACAATGGTTCCTCCCATCATGCAAAATCACAGAGATACAAGAAGAATGGTTTGCCTTCTTCCTAG 4794 40.38 MCHNCTMENGDSLNLDKGGPMPSGKICGEKQGWEYLKQANASPIISPVPTLSSCDSSISSFSDYSVELNSNERDNQAGPLGRNHEDLNCRLDLKPHQSSNGWRERDVIIQSNHNQEAQTSSPGDCKRSVNEADNDLPLYGEMDPEIWEPPGPEDPEDDMDGSVAYSDDDECGDGTVWGKSSSLRHSGEEGSGGYRLKEEKKRVMEEVRNGKFKAIVCQHIKSVGVVPYGEDGESWLDIVTSLSWEAASFLKPDAVYGKAMDASCDVKVKCIATGSRSESQFIKGLVFKKHAAHKHMPTKYRNPRLLLNKGMLGHSSSGLSSFDSMDQEKDHMMKSVTEMIELCNPNVVLVEKTVSRDIQESILKKGMTLVVDMKLHRLERIARCTGSPILSPQDLMNKKLKQCDSFHIEKFVEEHAECGEGGKKPSKTLMFIEGCPTRLGCTILLKGAHSDELKRIKCAVQCAVVMASHLVLENSFLVDQRGMFSTIQTGVASIFPPYQVFSEVVSGNLSVNTVKESTAGNSSSTIDLSINGIQEGGFDNLKFEIEGNSTIFNQPYNPAILSGWTSLSSSLKKVIDERIPLENSYYSFHGSNPDTETVKDVSVSSTPEASDHSDLEIKGGSDDEYSVIAEQYKHLPEVSDKPPEMEKDLIQNKDDTNTALDSQSILVLMSVRNSLKGTICKQSRFSHIMFYKNFDIPLGTFLQENLLNQRNKCTTCDELPEGHSYYYAHHNKQLTIQVKQFSGGKSLPGYTEGKIWMWSRCGKCKSGKGIANSSKSVLLSSAARCLSFGKFLELNFSNHSSSSKSSSCDHSLLRDFLCFFGLGNMAAMFRYSNVATYTVSMPPQKLEFKISIRPERVMKETYMDVRKKGDLLFAEVANCLKTIRSQFESSTTNLEGSLQEVSLVEEILDKERSEFEVNLQNVISKDANPDQAIYKFLVLNRLRCELLLESCIWDRRLHSLLASERVYSKTNSGVDRGSERRESAEYGYVASDESPNLNAESYNYQERNKFLVKEIPVEGCDKECGGGDLLSASSVAEVIKPPIEDGPSPKGFSDEESVQIKPKGSIDSHSDDDSSHKESFNSHNHLQLQRTVMNSTDYEYTNSMTIRDISNEDTLGHPLGSSSGNSIEWFWSPFADVRQIELDLLQRSYLPKIESISSYMRKNLPSAYQLIIDEARRLHIPLGTDSYIVSDYETELSSIIACMMALLKDQPIQTEVFDSYSKSKGRGFAKSSESLQSLNRIPSNSSSESDSVHSSTSSITEKSHFSSFDGLIFLDSLVPETFKPTEHEGIAKSFGKGKYLVNCPYFSRFRDLRSRCCQSELDYIASLSRCRNWDAKGGKSKSFFAKTLDDRFIIKEIKKTEYDSFMKFALEYFNYMNQSYEVGNQTCLAKVLGIYQVTVRHEKSGKETRHDMMVMENLTFGRKITRQYDLKGALYARYNTATAGSDVLLDQNFVNDMNSSPLYVSNNAKRLLQRAVWNDTTFLNSINVMDYSLLVGVDTEKRELVCGIIDYLRQYTWDKQLETWVKSSLVPKNVLPTVISPIEYKRRFRKFMSTHFLSVPDHWCSEDSSDPCELCGDNGSSHHAKSQRYKKNGLPSS 1597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4192664 4201348 - Conep20aG0070100.1 Cone20ag0680 460584

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0680 1597 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1236 1417 IPR027484 -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 176 195 - -
Cone20ag0680 1597 Gene3D GroEL 277 447 IPR027409 -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 1576 1597 - -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 113 127 - -
Cone20ag0680 1597 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1336 1501 IPR002498 GO:0046488(InterPro)|GO:0052742(InterPro)
Cone20ag0680 1597 SUPERFAMILY SAICAR synthase-like 1282 1556 - -
Cone20ag0680 1597 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 97 989 - GO:0000285(PANTHER)|GO:0010008(PANTHER)|GO:0046854(PANTHER)
Cone20ag0680 1597 CDD PIPKc_PIKfyve 1305 1556 IPR044769 GO:0000285(InterPro)
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 1040 1088 - -
Cone20ag0680 1597 Pfam TCP-1/cpn60 chaperonin family 236 476 IPR002423 GO:0005524(InterPro)
Cone20ag0680 1597 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 277 447 - -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 596 617 - -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 1224 1255 - -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 596 610 - -
Cone20ag0680 1597 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1230 1556 IPR002498 GO:0046488(InterPro)|GO:0052742(InterPro)
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 113 163 - -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 1056 1080 - -
Cone20ag0680 1597 SUPERFAMILY GroEL apical domain-like 278 447 IPR027409 -
Cone20ag0680 1597 Gene3D - 1419 1557 IPR027483 -
Cone20ag0680 1597 SMART PIPK_2 1278 1557 IPR002498 GO:0046488(InterPro)|GO:0052742(InterPro)
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 1 23 - -
Cone20ag0680 1597 MobiDBLite consensus disorder prediction 147 163 - -
Cone20ag0680 1597 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1419 1557 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0680 K00921 - - cit:102608890 1644.4
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0754 Cone-Chr17:5653394 Cone20ag0680 Cone-Chr20:4192664 0 dispersed
Cone20ag0680 Cone-Chr20:4192664 Cone20ag1365 Cone-Chr20:8749407 2.84E-244 dispersed
Cone20ag0680 Cone-Chr20:4192664 Cone4ag0843 Cone-Chr4:5543472 4.41E-249 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1304 Blo01g01752 . . Bda03g00414 Bpe02g00190 Bpe04g00380 Bma04g00391 Bma01g02535 . . . Cma09g01172 . . . Cpe06g00918 . . . . . . . . . . . . . . . . . . Cone20ag0680 . . . . . . Bda11g00850 . . . . . . . Cmo09g01170 . . . Car09g01046 . . Bhi09g01620 . . . . . . Cla09g00997 Cam09g1055 Cec09g1057 Cco09g1071 . . Cre09g1019 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004019 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 0 0 7 3 1 43