Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0693 ATGGAGGATATTATTCATGAATCGACAGTATCAGCTTTTTCCCTGAAGAAAGAACCTTGCTCCATAAAGAAGATCATCATTGTGGCAGCCATTGCAGCCGGTATCCAGTTTGGGTGGGCACTACAACTCTCCTTGCTAACCCCCTACGTCCAACAGCTCGGCGTCCCTCATACTTGGGCTGCCTTCATCTGGCTCTGCGGACCGATCTCTGGCCTTCTCGTTCAGCCCATTGTTGGTTACTACAGTGATAGATGCACTTCCCGATTCGGTCGTCGCAGGCCCTTCATGCTCGGTGGGGCTGGCTTCGTCGCCATCGCTGTGTTCCTCATTGGTTTTGCCGCTGACATTGGACATTCAGCCGGTGATAACATCACTGCTCCCACAAAGCCTCGGGCTGTCGCTGTTTTCGTTGTCGGGTTTTGGATCCTAGACGTTGCTAATAACATGTTACAAGGCCCATGTCGGGCTTTTCTGGCCGACTTGTCGGATAACGACCATAGGAGGATGAGGATATCAAACGCTTTTTTCTCGTTTTTCATGGCTGTTGGGAATGTCCTCGGTTACTCTGCTGGATCTTACAGCAACCTCCATAAAATGCTTCCGTTTAGTTCGACCAAAGCATGCGATGTTTATTGTGCGAATTTGAAAACATGTTTCATCATTCATATTGTTCTCTTACTTACGGTCACTCTTTTAGCCATCTCATTTGTGAAGGAGGAGCCATTTGTTCAGTCCCATAACAACGATGAGGGTGGATCAATGCCATTCTTCGGTAATATTTTGACGGCGTTTAAACAATTATCAAGGCCAATGTGGATGCTGCTTCTAGTGACGGCGTTGAACTGGGTTGCATGGTTCCCATTTCTCTTATTCGATACGGACTGGATGGGATCAGAGGTTTATGGAGGGAAGCCCAAAGGGACTGCTCAAGAGATAAAGCTTTACAATTTGGGCGTGAGGGCCGGTTCACTTGGGCTGATGATAAATTCGATTGTTTTGGGTCTGGGCTCGTTGGTTATGGAGCCCATCGGTAGTGCCCTTGGTGGGGTCAAGTGGTGGTGGGGAATTGTGAACATTATGTTGGCAATTTGTATGGGGTCAACGGTAGTGGTCACTAAGGTGGCTGAGCATTGGAGGGCAGCTAATGGGGTCGTCAAACCTCCTAATGATATTAAGGGCGGAGCTTTGGCCATCTTTGCTATTCTTGGCATTCCACTTTCTGTCACCTTTTCTGTACCTTTTGCTTTGGCTTCAATCTTCTGCTCTAACTCTGATGCTGGTCAAGGGCTTTCTTTGGGACTTTTAAACTTGGCCATTGTTATTCCACAGATGTTTGTGTCAGTTGTGAGCGGATCTTTGGATGCAGTTTTTAAAGGAGGGAATTTGCCGGCGTTTGTGATGGGCGGTATCGCAGCTGCCATAAGCGCATTTCTCGCCATGTTTATCCTCCCAAATACACCCCGGCAGTTTACGAATGCCGTAATTATTGGCGGTGGACACTGA 1503 47.9 MEDIIHESTVSAFSLKKEPCSIKKIIIVAAIAAGIQFGWALQLSLLTPYVQQLGVPHTWAAFIWLCGPISGLLVQPIVGYYSDRCTSRFGRRRPFMLGGAGFVAIAVFLIGFAADIGHSAGDNITAPTKPRAVAVFVVGFWILDVANNMLQGPCRAFLADLSDNDHRRMRISNAFFSFFMAVGNVLGYSAGSYSNLHKMLPFSSTKACDVYCANLKTCFIIHIVLLLTVTLLAISFVKEEPFVQSHNNDEGGSMPFFGNILTAFKQLSRPMWMLLLVTALNWVAWFPFLLFDTDWMGSEVYGGKPKGTAQEIKLYNLGVRAGSLGLMINSIVLGLGSLVMEPIGSALGGVKWWWGIVNIMLAICMGSTVVVTKVAEHWRAANGVVKPPNDIKGGALAIFAILGIPLSVTFSVPFALASIFCSNSDAGQGLSLGLLNLAIVIPQMFVSVVSGSLDAVFKGGNLPAFVMGGIAAAISAFLAMFILPNTPRQFTNAVIIGGGH 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4349018 4351154 + Conep20aG0071400.1 Cone20ag0693 460597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0693 500 NCBIfam sucrose/proton symporter 21 486 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Cone20ag0693 500 PANTHER SUGAR TRANSPORTER 18 482 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cone20ag0693 500 SUPERFAMILY MFS general substrate transporter 25 488 IPR036259 -
Cone20ag0693 500 CDD MFS_SLC45_SUC 36 481 - -
Cone20ag0693 500 Gene3D MFS general substrate transporter like domains 21 482 IPR036259 -
Cone20ag0693 500 Pfam MFS/sugar transport protein 31 285 - -
Cone20ag0693 500 FunFam Sucrose transporter SUC2 23 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0693 Cone-Chr20:4349018 Cone6ag0603 Cone-Chr6:2956879 6.42E-141 dispersed
Cone4ag1269 Cone-Chr4:10438174 Cone20ag0693 Cone-Chr20:4349018 2.32E-169 transposed
Cone17ag0751 Cone-Chr17:5602000 Cone20ag0693 Cone-Chr20:4349018 8.78E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0693 K15378 - csv:116401998 702.205