Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0786 | ATGGATTCTGCAAGGAGTTGGTTACACAAGCTTCAACCTCGTGATAAGTTGAGGCTTTCTACGAGGAAGAAGGATCATGGAGGTGGAGAAGATTCGACGGCAGATGAAGAAGAGCTTTCCAGTATTACAAAGCAGAAAGCTGCAGCTGCAAAGCAGTACATTGAGAATCATTACAAGGAACAAATGAAGAACTTTCAGGATAGGAGGGAGCGACGTAATGTATTGGAAAAGAAATTGGCCGATGCAGATGTTTCAGAGGAAGATCAAAACAATTTACTTAAGTTCTTGGAGAAGAAGGAAACTGAATATATGCGCCTGCAAAGGCACAAAATGGGCGTAGAGGATTTTTGGTTATTAACAATGATCGGCAAGGGTGCATTTGGAGAGGTTCGGGTTTGTAGGGAGAAGACAACAGGTCATGTATATGCTATGAAAAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGGCAGGTTGAACATGTCAAAGCCGAAAGAAATCTGCTTGCCGAGGTTGACAGCAATTGCATTGTTAAACTGTACTGTTCTTTTCAAGATGATGATTATCTGTATCTTATTATGGAGTATCTACCTGGCGGTGATATGATGACCTTACTTATGAGAAAAGATACACTGACCGAGGATGAAGCCAGGTTTTATGTTGGAGAAACAGTTCTGGCTATTGAATCTATCCATAAACACAATTACATTCATAGAGATATTAAGCCTGACAACTTGCTGCTCGATAGATATGGACACTTGAGACTGTCAGACTTTGGACTATGCAAACCATTAGATTGCAGTACAATCCAAGAAGGAGATTTTATGGATGGGAGCAACATTCCTGTCGCTAGACAGAATGATGGTCGCCCTACAGCTCCTACACGCACACAACAAGAGCAACTACAACACTGGCAGAAGAACCGAAGAATGCTTGCTTACTCGACTGTTGGTACACCAGACTATATTGCTCCCGAGGTCTTGTTGAAGAAAGGTTATGGCATGGAATGTGATTGGTGGTCACTTGGTGCTATAATGTATGAAATGCTCGTTGGCTACCCACCTTTCTATTCCGATGACCCCATGTCAACATGTAGGAAGATAGTAAACTGGAAAACTCATTTGAAGTTTCCTGAAGAAGCGAGGCTTTCTCCAGATGCAAAAGATCTTATTAGCAGACTGTTGTGTAATGTCAACCAGAGGCTAGGAACGCATGGTGTAGACGAGATTAAGGTCCATCCCTGGTTTCAAGGTCTCCAATGGGATAAACTATATCAAATGGATGCTGCATTTATTCCAGAGGTTAATGATGAGCTAGATACCCAAAATTTTGAAAAGTTTGAAGAGTCTGATAACCAGTGTCAGCCTTCATCCAAGACTGGTCCTTGGAGAAAGATGATTTCTTCAAAGGACATCAACTTTGTGGGTTACACGTATAAGAACTTTGAAATTGTCAATGATTACCAAGTGCCTGGAATGGCTTCTCTAAAGAAGAAGAACAACAAACCGGAAAGACCATCCATCAGGTCGCTTTTTGAGGGCGAGTCGGTGATGTCAGAAACATCAGAGACATCGGATATGTCAGAGCATAGTCAACAGAATTCTGAAGGACCTTGA | 1614 | 41.82 | MDSARSWLHKLQPRDKLRLSTRKKDHGGGEDSTADEEELSSITKQKAAAAKQYIENHYKEQMKNFQDRRERRNVLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVEDFWLLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTIQEGDFMDGSNIPVARQNDGRPTAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKTHLKFPEEARLSPDAKDLISRLLCNVNQRLGTHGVDEIKVHPWFQGLQWDKLYQMDAAFIPEVNDELDTQNFEKFEESDNQCQPSSKTGPWRKMISSKDINFVGYTYKNFEIVNDYQVPGMASLKKKNNKPERPSIRSLFEGESVMSETSETSDMSEHSQQNSEGP | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 5530425 | 5536088 | - | Conep20aG0080700.1 | Cone20ag0786 | 460690 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0786 | 537 | CDD | STKc_NDR_like | 114 | 479 | - | - | |
Cone20ag0786 | 537 | SUPERFAMILY | Protein kinase-like (PK-like) | 89 | 467 | IPR011009 | - | |
Cone20ag0786 | 537 | FunFam | Non-specific serine/threonine protein kinase | 314 | 433 | - | - | |
Cone20ag0786 | 537 | Pfam | Protein kinase C terminal domain | 434 | 478 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | Gene3D | Phosphorylase Kinase; domain 1 | 87 | 199 | - | - | |
Cone20ag0786 | 537 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Cone20ag0786 | 537 | Gene3D | Transferase(Phosphotransferase) domain 1 | 314 | 433 | - | - | |
Cone20ag0786 | 537 | ProSiteProfiles | Protein kinase domain profile. | 116 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | SMART | serkin_6 | 116 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 40 | 483 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cone20ag0786 | 537 | MobiDBLite | consensus disorder prediction | 513 | 537 | - | - | |
Cone20ag0786 | 537 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 416 | 488 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | CDD | MobB_NDR_LATS-like | 50 | 111 | - | - | |
Cone20ag0786 | 537 | Gene3D | Phosphorylase Kinase; domain 1 | 434 | 444 | - | - | |
Cone20ag0786 | 537 | ProSitePatterns | Protein kinases ATP-binding region signature. | 122 | 145 | IPR017441 | GO:0005524(InterPro) | |
Cone20ag0786 | 537 | FunFam | Non-specific serine/threonine protein kinase | 200 | 267 | - | - | |
Cone20ag0786 | 537 | FunFam | Non-specific serine/threonine protein kinase | 87 | 199 | - | - | |
Cone20ag0786 | 537 | SMART | pkinase_C_6 | 416 | 480 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 235 | 247 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Cone20ag0786 | 537 | Pfam | Protein kinase domain | 312 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | Pfam | Protein kinase domain | 120 | 265 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone20ag0786 | 537 | Gene3D | Transferase(Phosphotransferase) domain 1 | 200 | 267 | - | - | |
Cone20ag0786 | 537 | MobiDBLite | consensus disorder prediction | 495 | 537 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0786 | Cone-Chr20:5530425 | Cone5ag1534 | Cone-Chr5:10521986 | 4.41E-271 | dispersed | |
Cone15ag0165 | Cone-Chr15:793624 | Cone20ag0786 | Cone-Chr20:5530425 | 2.09E-301 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82555 | PF02309 | AUX_IAA | 1.50E-89 | CL0072 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0786 | K08790 | - | mdm:103435728 | 936.021 |