Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone20ag0830 | ATGGCAGCAAGCAGTCTACGCTGCATTGCTTTCGCTTACAAGCAAATCCATGAAGAAGAATTGGAATATAAAGATCATGATAAGACCAGCTCAACGCTCAAAGAAGACGGCCTGATCTTACTAGGAATCATTGGCATCAAAGACCCATGTAGACCAGGCGTGAGAGCAGCCGGAGTTTCGATCAAAATGATAACGGGAGATAACATTTTCACGGCAAAAGCTATAGCAGCAGAATGTGGAATACTAGACCCGGATATGAAACTAAAAATCGAAGATGTAATCATAGAAGGGTCCGAATTTCGAAACTTTACACACGGAGAGAGAATGCAAAAGGTCGATAATATCCTCGTCGTGGCAAGATCCTCTCCGTTCGACAAGCTACTAATGGTCCAATGCTTGAAACAAAAGGGCCATGTGGTTGCAGTCACTGGAGACGGAACGAACGATGCACCAGCTCTAAAAGAAGCCGATATAGGACTCTCCATGGGAATAGAAGGAACCGAGGTGGCTAAGGAGAGTTCAGACATAGTCATCTTAGACGATAACTTCAACTCCGTAGCAACGGTTTTAAGGTGGGGCCGGTGCGTATACAACAACATACAAAAATTCATCCAGTTCCAGTTGACGGTTAATGTTGCTGCTCTAGTAATCAACTTTATAGCTGCACTTTCGGCAGGAAAAGTTCCTTTAACCGCCGTTCAATTGTTATGGGTGAATCTCATTATGGACACATTAGGTGCTCTGGCTTTAGCAACAGAGAAACCAACCGACGAATTAATGATGAAACCGCCCGTGGGCCGGACCGAGCCGCTCATAACAAACATCATGTGGAGGAACCTTATAGCTCAAGCCTCATACCAAATCTGTGTCCTTTTGACTTTTGAGTTTAGGGGCGAGTCGATTTTTAATGTGAGTGAGGCAGTTAAAGATACACTTATTTTCAACACATTTGTGCTGTGTCAAGTGTTCAATGAGTTCAACTCGAGGAAGATGGAGAAGATGAATGTTTTTGAAGGTATTTTGGGGAATAAGTTGTTTATATGGATTGTAGGGATGACGGTTGTTCTTCAGGCGGTCATGGTAGAGTTTTTAAAGAAGTTTGCGGATACGGAGAGGTTGAATTGGTGGCAGTGGGGAGTTTGTGTTGCTTTTGCAGTCCTTTCTTGGCCGATTGGTTGGGTTGTTAAGCTTGTGCCGGTAACGGAAAAACCATATTTTAGCTACCTTAAGCAGCTGAAAGGCTTGTTTGCTAAGATTAGATATAGTTTCTACCAAACCAGAGCTGATTCTCGCAGGCTTGGAACTCCGTAG | 1311 | 43.71 | MAASSLRCIAFAYKQIHEEELEYKDHDKTSSTLKEDGLILLGIIGIKDPCRPGVRAAGVSIKMITGDNIFTAKAIAAECGILDPDMKLKIEDVIIEGSEFRNFTHGERMQKVDNILVVARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAALSAGKVPLTAVQLLWVNLIMDTLGALALATEKPTDELMMKPPVGRTEPLITNIMWRNLIAQASYQICVLLTFEFRGESIFNVSEAVKDTLIFNTFVLCQVFNEFNSRKMEKMNVFEGILGNKLFIWIVGMTVVLQAVMVEFLKKFADTERLNWWQWGVCVAFAVLSWPIGWVVKLVPVTEKPYFSYLKQLKGLFAKIRYSFYQTRADSRRLGTP | 436 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 5889956 | 5891266 | + | Conep20aG0085200.1 | Cone20ag0830 | 460734 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone20ag0830 | 436 | Pfam | haloacid dehalogenase-like hydrolase | 39 | 157 | - | - | |
Cone20ag0830 | 436 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 1 | 49 | IPR023299 | GO:0000166(InterPro) | |
Cone20ag0830 | 436 | Pfam | Cation transporting ATPase, C-terminus | 228 | 398 | IPR006068 | - | |
Cone20ag0830 | 436 | PRINTS | H+-transporting ATPase (proton pump) signature | 143 | 159 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone20ag0830 | 436 | PRINTS | H+-transporting ATPase (proton pump) signature | 175 | 200 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone20ag0830 | 436 | Gene3D | - | 2 | 49 | IPR023299 | GO:0000166(InterPro) | |
Cone20ag0830 | 436 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 193 | 400 | IPR023298 | - | |
Cone20ag0830 | 436 | FunFam | Plasma membrane calcium-transporting ATPase 2 | 50 | 188 | - | - | |
Cone20ag0830 | 436 | NCBIfam | HAD-IC family P-type ATPase | 117 | 223 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone20ag0830 | 436 | FunFam | Calcium-transporting ATPase | 160 | 402 | - | - | |
Cone20ag0830 | 436 | SUPERFAMILY | HAD-like | 36 | 248 | IPR036412 | - | |
Cone20ag0830 | 436 | Gene3D | - | 50 | 188 | IPR023214 | - | |
Cone20ag0830 | 436 | PRINTS | P-type cation-transporting ATPase superfamily signature | 143 | 162 | - | - | |
Cone20ag0830 | 436 | PRINTS | P-type cation-transporting ATPase superfamily signature | 42 | 53 | - | - | |
Cone20ag0830 | 436 | PRINTS | P-type cation-transporting ATPase superfamily signature | 167 | 179 | - | - | |
Cone20ag0830 | 436 | Gene3D | - | 189 | 397 | - | - | |
Cone20ag0830 | 436 | PANTHER | CATION TRANSPORTING ATPASE | 1 | 400 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0830 | Cone-Chr20:5889956 | Cone4ag0278 | Cone-Chr4:1262302 | 1.25E-208 | dispersed | |
Cone20ag0830 | Cone-Chr20:5889956 | Cone3ag0703 | Cone-Chr3:3598745 | 2.53E-119 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone20ag0830 | K01537 | - | vvi:100259561 | 634.795 |