Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone20ag0845 | ATGGGTACTGTCATTACTCCAGTGGTTGGGTCTTTAGTTTGGGTGGAAGATCCTGAAGAAGCTTGGATGGACGGGGAAGTCTTGCAGGTTAACGGTGAAGATATTAAGGTCCATTGCACCTCAGGAAAGACGATTATTGTCAAAGCATCCCATGTCTATCCAAAAGATGCTGAAGTTCCACCATGTGGGGTAGATGACATGACAAAGCTGGCTTATTTACATGAACCAGGAGTCCTGCAGAATTTAAAATTAAGATATGATATCAACGAAATATATACTTACACAGGGAATATACTGATTGCTGTGAATCCATTTAGAAGATTACCTCATCTCTATGACAGCCATATGATGGCACAATACAAAGGAGCGGCCTTTGGAGAGTTGAGTCCACACCCATTTGCAGTTGCAGATGCTGCTTACAGACTAATGGTTAATGAGGGCATAAGTCAATCTATATTGGTCAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACGAAATTGCTTATGCGTTATCTTGCTTACATGGGTGGGAGAGGAGCCGCTGCTGAGGGGAGGAGTGTCGAGCAGAAAGTTCTTGAGTCGAATCCTGTTCTAGAAGCATTTGGTAATGCAAAGACTGTGAGGAACAATAACTCAAGTCGGTTTGGTAAGTTTGTGGAGATTCAATTTGACCGAAATTGGAGGATTTCAGGAGCTGCTATCAGAACTTACCTGCTGGAAAGATCACGTGTTTGTCAGGTTTCAGATCCAGAGAGAAACTATCACTGCTTCTACATGCTTTGTGCTGCCCCCCCAGAGGAAATCAAGAGGTACAAATTGGGGGACCCGAGAAGCTTTCATTATCTGAATCAATCAAATTGCTATGAGTTGGATGGCCTCGATGAATCTAAGGAATATACTGCAACAAGAAGAGCAATGGATGTTGTTGGAATAAGTATAGATGAACAGGATGCAATATTTCGTGTTTTGGCTGCGATTCTCCATCTTGGGAACATTGAATTTGCAAAAGGAAAAGAAATAGACTCCTCTGTGCCTAAGGATGAAAAGTCTCGCTTCCATCTTAAAACTGCTGCTGAGCTTTTCATGTGTGATGAAAAGGCTCTGGAAGATTCTCTTTGTAAACGTGTGATTGTCACTCGTGATGAAACCATCACAAAGTGGTTGGATCCAGAATCTGCTGCTCTTAGTAGAGATGCTTTGGCAAAAATTGTGTACGCGAGGCTGTTTGACTGGCTTGTTGATAAGATCAATAGCTCAATTGGCCAAGACCCTAACTCGAAGTTTTTAATTGGAGTACTGGATATCTATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAATTTAACAAATGAGAAGCTTCAGCAACATTTCAATCAGCATGTTTTCAAAATGGAGCAAGAAGAGTATACCAAGGAAGAAATTGATTGGAGTTATATTGAATTTGTGGATAATCAAGATATTCTCGATCTCATTGAAAAGAAACCTGGTGGCATAATTGCTCTTCTTGATGAAGCATGCATGTTTCCAAGATCTACACATGAAACATTTGCCCAGAAGCTGTATACGACATTTAAAAATCATAAACGCTTTGTCAAGCCCAAATTATCTAGGAGTGACTTCACAATTCTTCATTATGCTGGTGATGTCACTTATCAAACTGAACTGTTTCTCGACAAGAATAAAGATTATGTTGTTGCCGAGCACCAAGCACTCTTGGGTGCTTCCAAATGCATTTTTGTATCGGGTTTGTTTCCTCCATTAGCTGAAGATTCTTCAAAATCATCAAAGTTCTCTTCCATAGGTTCTCGCTTCAAGCAACAATTGCAATCATTGCTGGAAACACTCAGTCACACTGAGCCACATTACATTAGATGTGTAAAACCCAACAGTCTCCTCAAGCCTGCCATCTTTGAGAATAAAAATGTTTTACAGCAACTGCGCTGTGGGGGAGTTATGGAAGCAATTAGGATTAGTTGTGCTGGATATCCTACTAGGAAACCATTTGAGGAATTCATCGATCGATTTAGCCTCCTCGCACCTCAAGCTCTGGATGGAAGCTCTGATGAAATTGCTGCATGCAAGAAGCTTCTAGAGAAGGTTGGGCTCGAAGGGTATCAGATTGGTAAGACAAAGGTGTTTCTCAGGGCTGGTCAAATGGCTGAACTAGATGGCCGTAGGACTGAGGTCTTGGGAAGATCAGCTAGCATTATTCAGCGTAAAGTACGTAGTTATTTGGCTCGCAGAAGCTTTGTCTTGCTTCGTCGCTCAGCAATAAGTATTCAAGCTGCTTATAGAGGACAAATGGCTCGTCAAGATTATGAAAGCAAGCGGAGAGAAGCTTCCTCTCTGATTATCCAGAGGAACTCTCGTATGTACCTCAAAAGAAAAGCTTACAGAGGAGTGCTTTCTTCTGCTGGTTGTATTCAAACAGGAATGCGTGGAATGGCTGCTCGAAATGAGCTACGCTCTAGAAGGCAGACTAAAGCAGCAATTCTCATCCAGAGCCATTGCCATAAATTCTTGGCACAACTTCATTACAAGGAAACAAAGAAAGCAGCAATTGCCACCCAATGTGCTTGGAGAAGAAAAGTTGCTCGTGGGGAACTACGCAAGCTTAAGATGGCTGCAAGGGAAACAGGAGCTCTTCAAGCAGCCAAAAATAAACTGGAAAAGCAAGTTGAAGAACTTACATGGAGATTGCAGTTAGAGAAACGCATGAGGACTGACATGGAAGAAGCTAAAACACAAGAAAATGAAAAACTGCAATCTGCTCTGCAAGAGATGCGATATCAGTTTAAAGAGACTAGAGCAATGCTTGAAAAGGAACGGGAGGCTGTAAAAAGAGAAGCAGAGAAGGTCCCTGTTATAAAAGAGGTTCCAGTTGTTGACCATGCTATGCTTGAGAAGCTTTCTTCTGAAAATGAAAAGCTCAAGGCTTTGGTGAACTCACTGGAGAAGAAAATTGATGAAACTGAGAAGAAGTATGTAGAGGCAAACAAGATGAGCGAAGAGAGGTTGAAGCAAGCCCAGGAGGCAGAGACAAAGATAATTCAGTTAAAGACTACAATGCAGAGACTTGAGGAGAAGTTCTCTGATATTAAATCCCAGAATCAGGAGCTTCGGCAGCAGGCCTTGCTGAAATCTCCAGCCAAAGTGCCATCAGAGCTTCCACCTATGCCTTCTACTGAGAGACTGGGAAATGGCCACCATATGATTAACGAGAATCCAATTAATGAACCACCGATTGCAACTCCTACGAAGAAGCTTGGTTCAGAACACCAACAGGAGAATGTTGATGCCCTTATTGATTGTGTTATGAAAAATATTGGGTTTAGTCATGGTAAGCCCATTGCAGCATTAACCATTTACAAGTGCCTTCTTCAATGGAAATCGTTCGAGGCTGAAAGAACCAGTGTTTTTGATCGGCTGATACAAATGATTGGGTCTGCAATAGAGGATCAAGATAACAACGACCATATGGCTTATTGGCTGTCAAACACATCTGCATTATTGTTCTTGCTGCAACGAAGCCTGAAGCCGGCTGGTGCTACTCATAGAAAGACCCCCTCCGCTTCTTCCTTTTTTGAGCGGATGGGTTTCCGTTCCCCTTCTTCCATTAATCTTGCTGTAACACTTAAGGTTGTTCGCCAAGTAGAAGCAAAGTACCCAGCTTTGCTTTTCAAGCAGCAGCTCACAGCCTATGTGGAGAAAATATTTGGAATGATTCGGGATAACTTGAAGAAAGAGTTGGCATCATTCATTTCCTTATGTATCCAGGCACCAAGGGCATCAAAGGGAGTGCTGAGATCAGGAAAATCATTTGGGAAAGACTCTTCAACAAGTTACTGGCAGAGCATCATAGAAAGCCTGAACACTTTCCTCTGCACAATGAAAGAAAATTTTGTTCCTCCAATTCTTATACAGAAAATCTATACACAAACATTTTCATATATCAATGTTCAACTCTTTAATAGTCTTCTTCTACGCCGTGAATGTTGTACATTTAGCAATGGGGAGTATGTAAAAGCTGGGTTAGCAGAGTTGGAGCTGTGGTGCTGCCAAGCAAAAGAAGAGTATGCTGGCGCTTCTTGGGATGAGCTTAAACACATAAGGCAGGCTGTTGGCTTCTTGGTTATACATCAGAAATACAGAATCTCGTATGATGAAATAATCAATGATCTTTGCCCCATCTTGAGTGTCCAGCAGCTGTATAGAATATGTACACTATACTGGGATGACAACTACAACACCCGAAGTGTCTCGCCCGAGGTAATTTCCAACATGAAAGTCCTTATGACAGAGGACTCCAACAATGCAGTTAGCAATTCTTTCCTCTTGGATGACAGTTCCAGCATCCCATTCTCGGCTGATGACCTCTCTAATTCAATGCAAGAGAAAGACTTCTCCGACGTCAAAGCAGCCGACGAGCTTATCGAGAATCCAGCCTTCGAATTTTTAAACGAGTGA | 4485 | 42.07 | MGTVITPVVGSLVWVEDPEEAWMDGEVLQVNGEDIKVHCTSGKTIIVKASHVYPKDAEVPPCGVDDMTKLAYLHEPGVLQNLKLRYDINEIYTYTGNILIAVNPFRRLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMVNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRGAAAEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRNWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEIKRYKLGDPRSFHYLNQSNCYELDGLDESKEYTATRRAMDVVGISIDEQDAIFRVLAAILHLGNIEFAKGKEIDSSVPKDEKSRFHLKTAAELFMCDEKALEDSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYARLFDWLVDKINSSIGQDPNSKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYTTFKNHKRFVKPKLSRSDFTILHYAGDVTYQTELFLDKNKDYVVAEHQALLGASKCIFVSGLFPPLAEDSSKSSKFSSIGSRFKQQLQSLLETLSHTEPHYIRCVKPNSLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFEEFIDRFSLLAPQALDGSSDEIAACKKLLEKVGLEGYQIGKTKVFLRAGQMAELDGRRTEVLGRSASIIQRKVRSYLARRSFVLLRRSAISIQAAYRGQMARQDYESKRREASSLIIQRNSRMYLKRKAYRGVLSSAGCIQTGMRGMAARNELRSRRQTKAAILIQSHCHKFLAQLHYKETKKAAIATQCAWRRKVARGELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRTDMEEAKTQENEKLQSALQEMRYQFKETRAMLEKEREAVKREAEKVPVIKEVPVVDHAMLEKLSSENEKLKALVNSLEKKIDETEKKYVEANKMSEERLKQAQEAETKIIQLKTTMQRLEEKFSDIKSQNQELRQQALLKSPAKVPSELPPMPSTERLGNGHHMINENPINEPPIATPTKKLGSEHQQENVDALIDCVMKNIGFSHGKPIAALTIYKCLLQWKSFEAERTSVFDRLIQMIGSAIEDQDNNDHMAYWLSNTSALLFLLQRSLKPAGATHRKTPSASSFFERMGFRSPSSINLAVTLKVVRQVEAKYPALLFKQQLTAYVEKIFGMIRDNLKKELASFISLCIQAPRASKGVLRSGKSFGKDSSTSYWQSIIESLNTFLCTMKENFVPPILIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDDNYNTRSVSPEVISNMKVLMTEDSNNAVSNSFLLDDSSSIPFSADDLSNSMQEKDFSDVKAADELIENPAFEFLNE | 1494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 6138631 | 6153553 | - | Conep20aG0087100.1 | Cone20ag0845 | 460749 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone20ag0845 | 1494 | Coils | Coil | 878 | 937 | - | - | |
| Cone20ag0845 | 1494 | SMART | DIL_2 | 1315 | 1422 | IPR002710 | - | |
| Cone20ag0845 | 1494 | Coils | Coil | 973 | 1049 | - | - | |
| Cone20ag0845 | 1494 | Gene3D | - | 253 | 311 | - | - | |
| Cone20ag0845 | 1494 | Pfam | Myosin N-terminal SH3-like domain | 9 | 50 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | FunFam | Myosin XI D | 736 | 785 | - | - | |
| Cone20ag0845 | 1494 | SMART | MYSc_2a | 57 | 734 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | ProSiteProfiles | Myosin motor domain profile. | 62 | 733 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 787 | 884 | IPR027417 | - | |
| Cone20ag0845 | 1494 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 313 | 602 | - | - | |
| Cone20ag0845 | 1494 | FunFam | unconventional myosin-Va | 834 | 882 | - | - | |
| Cone20ag0845 | 1494 | Gene3D | - | 440 | 624 | - | - | |
| Cone20ag0845 | 1494 | ProSiteProfiles | IQ motif profile. | 809 | 836 | - | - | |
| Cone20ag0845 | 1494 | Pfam | DIL domain | 1316 | 1420 | IPR002710 | - | |
| Cone20ag0845 | 1494 | ProSiteProfiles | Dilute domain profile. | 1147 | 1440 | IPR002710 | - | |
| Cone20ag0845 | 1494 | PANTHER | MYOSIN | 13 | 1439 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cone20ag0845 | 1494 | PRINTS | Myosin heavy chain signature | 197 | 224 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | PRINTS | Myosin heavy chain signature | 483 | 511 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | PRINTS | Myosin heavy chain signature | 430 | 458 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | ProSiteProfiles | IQ motif profile. | 738 | 765 | - | - | |
| Cone20ag0845 | 1494 | ProSiteProfiles | IQ motif profile. | 759 | 788 | - | - | |
| Cone20ag0845 | 1494 | FunFam | Class V myosin | 440 | 581 | - | - | |
| Cone20ag0845 | 1494 | Pfam | IQ calmodulin-binding motif | 738 | 756 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | Pfam | IQ calmodulin-binding motif | 833 | 853 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | Pfam | IQ calmodulin-binding motif | 787 | 805 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | Pfam | IQ calmodulin-binding motif | 760 | 779 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | Gene3D | - | 667 | 734 | - | - | |
| Cone20ag0845 | 1494 | ProSiteProfiles | IQ motif profile. | 855 | 884 | - | - | |
| Cone20ag0845 | 1494 | Gene3D | - | 785 | 833 | - | - | |
| Cone20ag0845 | 1494 | Gene3D | - | 834 | 883 | - | - | |
| Cone20ag0845 | 1494 | Gene3D | - | 736 | 784 | - | - | |
| Cone20ag0845 | 1494 | FunFam | Myosin 2 | 313 | 427 | - | - | |
| Cone20ag0845 | 1494 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 33 | 786 | IPR027417 | - | |
| Cone20ag0845 | 1494 | Gene3D | Kinesin motor domain | 65 | 663 | IPR036961 | - | |
| Cone20ag0845 | 1494 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | MobiDBLite | consensus disorder prediction | 1053 | 1100 | - | - | |
| Cone20ag0845 | 1494 | Pfam | Myosin head (motor domain) | 64 | 721 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cone20ag0845 | 1494 | SMART | iq_5 | 831 | 853 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | SMART | iq_5 | 854 | 876 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | SMART | iq_5 | 735 | 757 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | SMART | iq_5 | 758 | 780 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | SMART | iq_5 | 783 | 805 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | SMART | iq_5 | 806 | 828 | IPR000048 | GO:0005515(InterPro) | |
| Cone20ag0845 | 1494 | CDD | MyosinXI_CBD | 1098 | 1463 | IPR037975 | GO:0007015(InterPro) | |
| Cone20ag0845 | 1494 | ProSiteProfiles | IQ motif profile. | 784 | 812 | - | - | |
| Cone20ag0845 | 1494 | FunFam | Myosin heavy chain | 253 | 308 | - | - | |
| Cone20ag0845 | 1494 | CDD | MYSc_Myo11 | 76 | 721 | IPR036018 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag0845 | Cone-Chr20:6138631 | Cone4ag0805 | Cone-Chr4:5072247 | 0 | dispersed | |
| Cone4ag0376 | Cone-Chr4:1705561 | Cone20ag0845 | Cone-Chr20:6138631 | 0 | transposed | |
| Cone17ag0652 | Cone-Chr17:3882343 | Cone20ag0845 | Cone-Chr20:6138631 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone20ag0845 | K10357 | - | cit:102628638 | 2478.74 |