Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone20ag0900 | ATGGCCCTCCAAGAGGTATACTTATGGCTACCTCTTCTCCTCCTTCTATCTATCCTTTTCTTCAGAAAACAGAAGAAACGCCAACAGAAAAACTTCCCCCCAAGCCCCCCCAAGCTTCCCATTATTGGTAACTTGCACCAAATAGGATCCTTGCCTCACTCCTCTATGTACCATCTCTCCAAGATACATGGCCCAATCATGTCCTTACAACTCGGTCGTTTTCCAGCTGTGATAATCTCCTCAACTGAAGCTGCCAAAGATGTCTTAAAAACTCATGATCTTGCTTGTTGCGGTAGGCCCACATTCGCAGGGTCAGGAAGACTCTCATATAACTATCTTGACATTGCGTTTTCACCTTATGGTGATTATTGGCGAGAGATCAGAAAATTATGCGTTCTCGAGCTTCTTAGCGTGAAGAGGGTGAGAACCTATCAAGTTATTCGGGAAGAAGAAATCAATTCGGTTATTGAATCGATAAAAGATTGTGCAACTAAGGAAAGTAATATTCCGGTTGATCTTACGGAGAAGTTAGTTTCCCTAATGGCTAGTGTGACTTATAGGATTGCTTTTGGGAGGAGATTCAAAGCAGATGATTTTAAATACTATAAGACAGTTCATGACGTTGTTGATGATGCTGTGACTGTAATAGGTGGTTTTCAAGCTTCCGAGTGCTTTCACCCTTTCGTGGGATGGATCATTGATAAACTAAGAGGTCAACATCAAAAGCTTGAAAGGATTTTTAACGAGTTTGATACTTGTTTCCAGCAGTTGATTGATGAACATATTGACCCGGCTCGGATTAAACCAGATCAAGATGCTATTATTGATGTGCTCTTGGGAATAGAGAAGGGACAAAAGGAGGTTGGTGTTGCTTTGAAAGGCAAAGATAGCATCAAGGCGATCCTCATGAACGTATTCTTAGGTGGAATAGACAATACTGCTATCACTATGATCTGGGCAATGACAGAGCTAGTGAGGAACCTTAAAATAATGAGAAAGGCACAAGCAGAAGTCAGAAATGTAATGAGATCAGAAGGAAAAGTCAGCGAAGATGGGATCAACCAACTTCAATATCTAAAGTTAATAGTCAAAGAAACACTTAGACTTCACCCTCCAGGTCCATTGCTACTTCCAAGACAAACCATATCAAGTTTCAACTTACAAGGCTATGAAATCCCACCAAAAACACTAATCCAAGTGAACGCTTGGGCGATAGGAAGGGACCCCGCATACTGGAAGGATCCGGAAGAGTTTAATCCGGAGAGGTTTGAAGATAGCTTGTTTGATTTTAAAGGGCAAAATTTTGAGTACTTGCCATTTGGAAGTGGTAGAAGAGGCTGCCCTGGAATTTACATGGCAACATCAATGATTGAGCTTGTTCTGGCGAACTTGTTGTATTGGTTTGATTGGAAGTTGCCTGATGGAATAAAGTCCGAGGATTTGAATATGGAAGAGAGTATTGGGCATAGATTGTCTGTTTCAAAAAAGAATCCCCTCATTCTCGTGCCTATAATTCCAGGCTCATCAAGTTGA | 1533 | 41.36 | MALQEVYLWLPLLLLLSILFFRKQKKRQQKNFPPSPPKLPIIGNLHQIGSLPHSSMYHLSKIHGPIMSLQLGRFPAVIISSTEAAKDVLKTHDLACCGRPTFAGSGRLSYNYLDIAFSPYGDYWREIRKLCVLELLSVKRVRTYQVIREEEINSVIESIKDCATKESNIPVDLTEKLVSLMASVTYRIAFGRRFKADDFKYYKTVHDVVDDAVTVIGGFQASECFHPFVGWIIDKLRGQHQKLERIFNEFDTCFQQLIDEHIDPARIKPDQDAIIDVLLGIEKGQKEVGVALKGKDSIKAILMNVFLGGIDNTAITMIWAMTELVRNLKIMRKAQAEVRNVMRSEGKVSEDGINQLQYLKLIVKETLRLHPPGPLLLPRQTISSFNLQGYEIPPKTLIQVNAWAIGRDPAYWKDPEEFNPERFEDSLFDFKGQNFEYLPFGSGRRGCPGIYMATSMIELVLANLLYWFDWKLPDGIKSEDLNMEESIGHRLSVSKKNPLILVPIIPGSSS | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 20 | 6520804 | 6523101 | + | Conep20aG0092800.1 | Cone20ag0900 | 460804 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | SUPERFAMILY | Cytochrome P450 | 33 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | FunFam | Cytochrome P450 83B1 | 20 | 502 | - | - | |
| Cone20ag0900 | 510 | Pfam | Cytochrome P450 | 33 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone20ag0900 | 510 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 504 | IPR050193 | - | |
| Cone20ag0900 | 510 | Gene3D | Cytochrome P450 | 18 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone20ag0900 | 510 | CDD | CYP71-like | 63 | 499 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone20ag0900 | Cone-Chr20:6520804 | Cone20ag0903 | Cone-Chr20:6532244 | 7.20E-292 | dispersed | |
| Cone20ag0900 | Cone-Chr20:6520804 | Cone20ag0901 | Cone-Chr20:6523911 | 8.12E-97 | tandem | |
| Cone17ag0473 | Cone-Chr17:2277104 | Cone20ag0900 | Cone-Chr20:6520804 | 7.76E-270 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone20ag0900 | - | - | - | 0.0 |