Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0900 ATGGCCCTCCAAGAGGTATACTTATGGCTACCTCTTCTCCTCCTTCTATCTATCCTTTTCTTCAGAAAACAGAAGAAACGCCAACAGAAAAACTTCCCCCCAAGCCCCCCCAAGCTTCCCATTATTGGTAACTTGCACCAAATAGGATCCTTGCCTCACTCCTCTATGTACCATCTCTCCAAGATACATGGCCCAATCATGTCCTTACAACTCGGTCGTTTTCCAGCTGTGATAATCTCCTCAACTGAAGCTGCCAAAGATGTCTTAAAAACTCATGATCTTGCTTGTTGCGGTAGGCCCACATTCGCAGGGTCAGGAAGACTCTCATATAACTATCTTGACATTGCGTTTTCACCTTATGGTGATTATTGGCGAGAGATCAGAAAATTATGCGTTCTCGAGCTTCTTAGCGTGAAGAGGGTGAGAACCTATCAAGTTATTCGGGAAGAAGAAATCAATTCGGTTATTGAATCGATAAAAGATTGTGCAACTAAGGAAAGTAATATTCCGGTTGATCTTACGGAGAAGTTAGTTTCCCTAATGGCTAGTGTGACTTATAGGATTGCTTTTGGGAGGAGATTCAAAGCAGATGATTTTAAATACTATAAGACAGTTCATGACGTTGTTGATGATGCTGTGACTGTAATAGGTGGTTTTCAAGCTTCCGAGTGCTTTCACCCTTTCGTGGGATGGATCATTGATAAACTAAGAGGTCAACATCAAAAGCTTGAAAGGATTTTTAACGAGTTTGATACTTGTTTCCAGCAGTTGATTGATGAACATATTGACCCGGCTCGGATTAAACCAGATCAAGATGCTATTATTGATGTGCTCTTGGGAATAGAGAAGGGACAAAAGGAGGTTGGTGTTGCTTTGAAAGGCAAAGATAGCATCAAGGCGATCCTCATGAACGTATTCTTAGGTGGAATAGACAATACTGCTATCACTATGATCTGGGCAATGACAGAGCTAGTGAGGAACCTTAAAATAATGAGAAAGGCACAAGCAGAAGTCAGAAATGTAATGAGATCAGAAGGAAAAGTCAGCGAAGATGGGATCAACCAACTTCAATATCTAAAGTTAATAGTCAAAGAAACACTTAGACTTCACCCTCCAGGTCCATTGCTACTTCCAAGACAAACCATATCAAGTTTCAACTTACAAGGCTATGAAATCCCACCAAAAACACTAATCCAAGTGAACGCTTGGGCGATAGGAAGGGACCCCGCATACTGGAAGGATCCGGAAGAGTTTAATCCGGAGAGGTTTGAAGATAGCTTGTTTGATTTTAAAGGGCAAAATTTTGAGTACTTGCCATTTGGAAGTGGTAGAAGAGGCTGCCCTGGAATTTACATGGCAACATCAATGATTGAGCTTGTTCTGGCGAACTTGTTGTATTGGTTTGATTGGAAGTTGCCTGATGGAATAAAGTCCGAGGATTTGAATATGGAAGAGAGTATTGGGCATAGATTGTCTGTTTCAAAAAAGAATCCCCTCATTCTCGTGCCTATAATTCCAGGCTCATCAAGTTGA 1533 41.36 MALQEVYLWLPLLLLLSILFFRKQKKRQQKNFPPSPPKLPIIGNLHQIGSLPHSSMYHLSKIHGPIMSLQLGRFPAVIISSTEAAKDVLKTHDLACCGRPTFAGSGRLSYNYLDIAFSPYGDYWREIRKLCVLELLSVKRVRTYQVIREEEINSVIESIKDCATKESNIPVDLTEKLVSLMASVTYRIAFGRRFKADDFKYYKTVHDVVDDAVTVIGGFQASECFHPFVGWIIDKLRGQHQKLERIFNEFDTCFQQLIDEHIDPARIKPDQDAIIDVLLGIEKGQKEVGVALKGKDSIKAILMNVFLGGIDNTAITMIWAMTELVRNLKIMRKAQAEVRNVMRSEGKVSEDGINQLQYLKLIVKETLRLHPPGPLLLPRQTISSFNLQGYEIPPKTLIQVNAWAIGRDPAYWKDPEEFNPERFEDSLFDFKGQNFEYLPFGSGRRGCPGIYMATSMIELVLANLLYWFDWKLPDGIKSEDLNMEESIGHRLSVSKKNPLILVPIIPGSSS 510
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 6520804 6523101 + Conep20aG0092800.1 Cone20ag0900 460804
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0900 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 FunFam Cytochrome P450 83B1 20 502 - -
Cone20ag0900 510 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone20ag0900 510 PANTHER CYTOCHROME P450 71B11-RELATED 13 504 IPR050193 -
Cone20ag0900 510 Gene3D Cytochrome P450 18 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0900 510 CDD CYP71-like 63 499 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0900 Cone-Chr20:6520804 Cone20ag0903 Cone-Chr20:6532244 7.20E-292 dispersed
Cone20ag0900 Cone-Chr20:6520804 Cone20ag0901 Cone-Chr20:6523911 8.12E-97 tandem
Cone17ag0473 Cone-Chr17:2277104 Cone20ag0900 Cone-Chr20:6520804 7.76E-270 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0900 - - - 0.0