Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone20ag0902 ATGGGATGGATTATCGATAGGCTAAGAGGTCAACATCAAAAGATTGAAAGGATTTTTAACGAGTTGGATACTTGCTACCAACAGTTGATTGATGAACATCTCGACCCGGCTCGGATTAAACCCGATCAAGAAGATATTATTGATGTGCTCTTGGGAATAGAGAAGGGACAAAAGAAGGTTGGTGTTGCTTTGAAAGGCAAAGATAGCATCAAGGCGATCCTTATGAACGTACTCATAGGTGGAATAGACAATACTGTTATCATTATGGTTTGGGCAATGGCAGAGCTAGCGAGGAACCCTAAAATAATGAGAAAAGCACAAGCAGAAGTCAGAAATATAATGAGATCAGAAGGAAAAGTCAGCGAAGATGGGATCGACCAACTTCAATATCTAAAGTTGATAGTCAAAGAGACATTGAGACTTCACATTTCAGGTCCATTTTTACTTCCAAGGCAGACTATGTTTGGTTTCAACTTACAAGGCTATGAAATCCCGCCAAAAACTCTAATCCAAGTGAACGCTTGGGCGATCGCAAGAGACCCCCGGTACTGGAAAAATCCAGAAGAATTCATTCCGGAAAGGTTTGAAGATAGCTCGGTTGATTTTAAAGGGAAAAATTATGAGTTCTTGCCGTTTGGAAGTGGTAGAAGAGGCTGCCCTGGAATCGATATGGCAACAACAATGATTGAACTTGTTTTGGCGAACTTGTTGTACTGGTTTGATTGGAAGTTGCCTGATGGAATAAAGCCTGAAGATTTGAATATGGAGGAAAGAGTCGGTCATAGCTTTACTCTTTCAAAAAAGGAACCCCTCATTCTTATTCCTTCAATTCCAGGATCATGA 843 40.57 MGWIIDRLRGQHQKIERIFNELDTCYQQLIDEHLDPARIKPDQEDIIDVLLGIEKGQKKVGVALKGKDSIKAILMNVLIGGIDNTVIIMVWAMAELARNPKIMRKAQAEVRNIMRSEGKVSEDGIDQLQYLKLIVKETLRLHISGPFLLPRQTMFGFNLQGYEIPPKTLIQVNAWAIARDPRYWKNPEEFIPERFEDSSVDFKGKNYEFLPFGSGRRGCPGIDMATTMIELVLANLLYWFDWKLPDGIKPEDLNMEERVGHSFTLSKKEPLILIPSIPGS 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6524520 6525572 + Conep20aG0093000.1 Cone20ag0902 460806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone20ag0902 280 SUPERFAMILY Cytochrome P450 7 273 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS P450 superfamily signature 80 97 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS P450 superfamily signature 133 144 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS P450 superfamily signature 219 230 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS P450 superfamily signature 210 219 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 FunFam Predicted protein 78 273 - -
Cone20ag0902 280 PANTHER CYTOCHROME P450 71B11-RELATED 2 275 IPR050193 -
Cone20ag0902 280 Pfam Cytochrome P450 11 262 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 212 221 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone20ag0902 280 Gene3D Cytochrome P450 1 273 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS E-class P450 group I signature 132 150 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS E-class P450 group I signature 209 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS E-class P450 group I signature 89 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS E-class P450 group I signature 69 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS E-class P450 group I signature 173 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone20ag0902 280 PRINTS E-class P450 group I signature 219 242 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0902 Cone-Chr20:6524520 Cone2ag0556 Cone-Chr2:3146952 4.08E-73 dispersed
Cone20ag0902 Cone-Chr20:6524520 Cone20ag0903 Cone-Chr20:6532244 1.37E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone20ag0902 - - - 0.0